FFCP PHASE1:Mm9::chr1:57029399..57029433,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:57029399..57029433,+|id=chr1:57029399..57029433,+|ontology_enrichment_celltype=CL:0002609!2.74e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,1.03e-23,6;CL:0002608,2.37e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!5.77e-13!21;UBERON:0001869!5.77e-13!21;UBERON:0000203!5.77e-13!21;UBERON:0002619!2.21e-09!17;UBERON:0002791!5.26e-09!29;UBERON:0003528!5.26e-09!29;UBERON:0001893!5.26e-09!29;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.22e-20,21;UBERON:0001869,1.22e-20,21;UBERON:0000203,1.22e-20,21;UBERON:0003528,1.16e-14,29;UBERON:0002791,1.16e-14,29;UBERON:0001893,1.16e-14,29;UBERON:0002020,2.39e-12,34;UBERON:0002619,2.15e-11,17;UBERON:0002780,1.27e-10,39;UBERON:0001890,1.27e-10,39;UBERON:0006240,1.27e-10,39;UBERON:0003080,2.49e-10,40;UBERON:0002021,4.22e-09,10;UBERON:0000411,4.22e-09,10;UBERON:0001950,4.22e-09,10;UBERON:0002616,7.76e-09,46;UBERON:0000955,1.26e-08,47;UBERON:0006238,1.26e-08,47;UBERON:0003056,3.17e-08,49;UBERON:0001049,1.10e-07,52;UBERON:0005068,1.10e-07,52;UBERON:0006241,1.10e-07,52;UBERON:0007135,1.10e-07,52;UBERON:0000073,2.34e-07,54;UBERON:0001153,6.93e-07,1;UBERON:0001045,6.93e-07,1;UBERON:0001851,7.89e-07,1;UBERON:0005889,7.89e-07,1|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,2.7996195323289,4.86021377994086,2.52389953621658,0,0,0.734944795289724,1.0543001812006,3.67687514644008,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.647067399789637,0.883366073841574,0.969750506270444,1.86391761218122,0,0,0,0,0,0,0,0,0.125654352112864,0.695297280769106,1.53429274398198,0,0,0,0.746441823660558,0,0,0,0.459804208866946,0.180062129805349,0,0,0.2562274405697,0,0,0,0,0.527853372491847,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0,0.779856348476481,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.210407459670956,0.379419222745544,0.738050739898011,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717710852875806,0.167884616364078,0,0.187682475451182,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,2.70192721934532,0.906284817968409,3.62432218226274,0,0,0,0.243106717068294,0.419226325255965,0.735374033800057,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.689225627467359,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.715308569841963,0.726732083161643,0.188218760830661,0.423073039458382,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,1.49886346762768,0.467863216890817,0.429742108096597,0.765153328275374,1.10295709559758,0.231867835620421|short_description=p@chr1:57029399..57029433,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:57029399..57029433,+ | |||
|id=chr1:57029399..57029433,+ | |||
|ontology_enrichment_celltype=CL:0002609!2.74e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.03e-23,6;CL:0002608,2.37e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!5.77e-13!21;UBERON:0001869!5.77e-13!21;UBERON:0000203!5.77e-13!21;UBERON:0002619!2.21e-09!17;UBERON:0002791!5.26e-09!29;UBERON:0003528!5.26e-09!29;UBERON:0001893!5.26e-09!29;UBERON:0002021!4.68e-08!10;UBERON:0000411!4.68e-08!10;UBERON:0001950!4.68e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.22e-20,21;UBERON:0001869,1.22e-20,21;UBERON:0000203,1.22e-20,21;UBERON:0003528,1.16e-14,29;UBERON:0002791,1.16e-14,29;UBERON:0001893,1.16e-14,29;UBERON:0002020,2.39e-12,34;UBERON:0002619,2.15e-11,17;UBERON:0002780,1.27e-10,39;UBERON:0001890,1.27e-10,39;UBERON:0006240,1.27e-10,39;UBERON:0003080,2.49e-10,40;UBERON:0002021,4.22e-09,10;UBERON:0000411,4.22e-09,10;UBERON:0001950,4.22e-09,10;UBERON:0002616,7.76e-09,46;UBERON:0000955,1.26e-08,47;UBERON:0006238,1.26e-08,47;UBERON:0003056,3.17e-08,49;UBERON:0001049,1.10e-07,52;UBERON:0005068,1.10e-07,52;UBERON:0006241,1.10e-07,52;UBERON:0007135,1.10e-07,52;UBERON:0000073,2.34e-07,54;UBERON:0001153,6.93e-07,1;UBERON:0001045,6.93e-07,1;UBERON:0001851,7.89e-07,1;UBERON:0005889,7.89e-07,1 | |||
|phase1_expression=0,0,0.909998478779072,0.30246421130683,1.50268718983904,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,2.7996195323289,4.86021377994086,2.52389953621658,0,0,0.734944795289724,1.0543001812006,3.67687514644008,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.647067399789637,0.883366073841574,0.969750506270444,1.86391761218122,0,0,0,0,0,0,0,0,0.125654352112864,0.695297280769106,1.53429274398198,0,0,0,0.746441823660558,0,0,0,0.459804208866946,0.180062129805349,0,0,0.2562274405697,0,0,0,0,0.527853372491847,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0,0,0.779856348476481,0,0.432276099749388,0.199141273254367,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.210407459670956,0.379419222745544,0.738050739898011,0.470996183524124,0.740382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59229946583586,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717710852875806,0.167884616364078,0,0.187682475451182,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,1.03111909406213,0,0.755393897389701,0.675022500231806,2.70192721934532,0.906284817968409,3.62432218226274,0,0,0,0.243106717068294,0.419226325255965,0.735374033800057,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.689225627467359,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0.715308569841963,0.726732083161643,0.188218760830661,0.423073039458382,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,1.49886346762768,0.467863216890817,0.429742108096597,0.765153328275374,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr1:57029399..57029433,+ | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p@chr1:57029399..57029433, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:57029399..57029433, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.03e-23 | 6 |
hippocampal neuron | 2.37e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.22e-20 | 21 |
cerebral hemisphere | 1.22e-20 | 21 |
pallium | 1.22e-20 | 21 |
brain grey matter | 1.16e-14 | 29 |
regional part of telencephalon | 1.16e-14 | 29 |
telencephalon | 1.16e-14 | 29 |
gray matter | 2.39e-12 | 34 |
regional part of cerebral cortex | 2.15e-11 | 17 |
regional part of forebrain | 1.27e-10 | 39 |
forebrain | 1.27e-10 | 39 |
future forebrain | 1.27e-10 | 39 |
anterior neural tube | 2.49e-10 | 40 |
occipital lobe | 4.22e-09 | 10 |
visual cortex | 4.22e-09 | 10 |
neocortex | 4.22e-09 | 10 |
regional part of brain | 7.76e-09 | 46 |
brain | 1.26e-08 | 47 |
future brain | 1.26e-08 | 47 |
pre-chordal neural plate | 3.17e-08 | 49 |
neural tube | 1.10e-07 | 52 |
neural rod | 1.10e-07 | 52 |
future spinal cord | 1.10e-07 | 52 |
neural keel | 1.10e-07 | 52 |
regional part of nervous system | 2.34e-07 | 54 |
caecum | 6.93e-07 | 1 |
midgut | 6.93e-07 | 1 |
cortex | 7.89e-07 | 1 |
zygote cortex | 7.89e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.