FFCP PHASE1:Hg19::chr6:3752058..3752106,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21361 | |||
|TSSclassifier=W | |||
|UniProt=Q5TGL8 | |||
|association_with_transcript=139bp_to_NM_183373,uc003mvt.2_5end | |||
|description=CAGE_peak_3_at_PXDC1_5end | |||
|id=chr6:3752058..3752106,- | |||
|ontology_enrichment_celltype=CL:0000055!1.33e-20!180;CL:0000057!2.52e-11!75;CL:0000220!4.94e-11!246;CL:0002321!1.21e-10!248;CL:0000222!9.34e-10!119;CL:0000183!2.17e-08!59;CL:0000680!1.05e-07!57;CL:0000056!1.05e-07!57;CL:0000355!1.05e-07!57;CL:0000187!2.34e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.15e-11,76;CL:0000222,1.07e-07,121;CL:0002321,1.80e-07,250;CL:0000680,3.74e-07,58;CL:0000056,3.74e-07,58;CL:0000355,3.74e-07,58;CL:0000187,9.33e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.98e-15!365;UBERON:0000119!2.84e-15!312;UBERON:0000468!4.78e-15!659;UBERON:0000483!5.81e-15!309;UBERON:0000481!2.75e-14!347;UBERON:0003914!3.53e-14!118;UBERON:0000467!7.87e-14!625;UBERON:0000480!1.49e-13!626;UBERON:0000477!2.07e-13!286;UBERON:0005256!8.07e-13!143;UBERON:0004111!9.18e-11!241;UBERON:0000923!1.35e-10!604;UBERON:0005291!1.35e-10!604;UBERON:0006598!1.35e-10!604;UBERON:0002532!1.35e-10!604;UBERON:0002050!1.60e-10!605;UBERON:0005423!1.60e-10!605;UBERON:0000922!1.91e-10!612;UBERON:0002049!3.37e-10!79;UBERON:0007798!3.37e-10!79;UBERON:0002100!5.05e-10!216;UBERON:0003104!7.85e-10!238;UBERON:0009142!7.85e-10!238;UBERON:0004872!1.52e-09!84;UBERON:0000025!2.59e-09!194;UBERON:0000490!2.80e-08!138;UBERON:0000055!3.26e-08!69;UBERON:0000914!3.54e-08!83;UBERON:0002329!3.54e-08!83;UBERON:0003077!3.54e-08!83;UBERON:0003059!3.54e-08!83;UBERON:0007282!3.54e-08!83;UBERON:0009618!3.54e-08!83;UBERON:0007285!3.54e-08!83;UBERON:0000486!3.91e-08!82;UBERON:0004290!4.48e-08!70;UBERON:0004535!5.22e-08!110;UBERON:0001981!6.77e-08!60;UBERON:0007500!6.77e-08!60;UBERON:0004537!6.77e-08!60;UBERON:0006965!6.77e-08!60;UBERON:0001009!1.44e-07!113;UBERON:0001134!1.50e-07!61;UBERON:0002036!1.50e-07!61;UBERON:0003082!1.50e-07!61;UBERON:0002385!1.55e-07!63;UBERON:0001015!1.55e-07!63;UBERON:0000383!1.55e-07!63;UBERON:0003103!9.75e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;8.05e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.73e-11,117;UBERON:0003104,9.44e-11,160;UBERON:0009142,9.44e-11,160;UBERON:0000119,2.73e-10,309;UBERON:0000483,5.23e-10,306;UBERON:0005256,9.57e-10,122;UBERON:0007503,3.63e-09,78;UBERON:0002049,3.48e-08,78;UBERON:0007798,3.48e-08,78;UBERON:0002329,1.59e-07,71;UBERON:0003059,1.59e-07,71;UBERON:0007282,1.59e-07,71;UBERON:0004290,1.59e-07,71;UBERON:0009618,1.59e-07,71;UBERON:0007524,1.84e-07,73;UBERON:0004872,1.95e-07,83;UBERON:0000486,2.64e-07,83;UBERON:0003077,3.28e-07,72;UBERON:0007285,3.28e-07,72;UBERON:0001134,3.42e-07,62;UBERON:0002036,3.42e-07,62;UBERON:0003082,3.42e-07,62;UBERON:0000490,3.72e-07,148;UBERON:0001013,4.07e-07,14;UBERON:0002385,4.81e-07,64;UBERON:0001015,4.81e-07,64;UBERON:0000383,4.81e-07,64;UBERON:0004535,8.01e-07,109;UBERON:0000055,9.34e-07,68 | |||
|phase1_expression=1.2717486548939,2.35510576280081,4.22863212287913,3.00219895059391,1.78784437770915,2.61701557230111,2.53299878168311,3.15859936713415,4.96252693579693,2.21160542851358,4.18680700783456,1.74753097704138,2.11013582582763,2.22779435328084,1.32558950291166,0.672325146451775,0,0.730310090387373,2.43966399395253,1.23121058076788,2.65200898617529,5.64218498660558,3.43483184557268,2.46373965131192,3.89182182743889,0,0,0,0,0,0,0.919421224478927,0.90361775633475,1.47901604066715,0,0,0,0,0,0,0,0.971680998056939,0.515151135268373,0.290796477559129,0.377875943688809,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,1.13477044938228,0,0.75374599577023,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,3.58015173161885,1.0843174571537,8.52274448081012,4.92478164466801,1.5905718941022,2.43317435151318,1.41802225746102,4.21285855178871,4.21606971327005,1.5062593682237,2.91436230634034,0.741568885568859,0.324547393654683,0.348259474598534,0.797747763113191,0,0,0,1.59009925893364,2.58070378531837,1.73570250803797,2.26123176769604,1.67799774483962,1.6507082516404,1.25396979922086,1.55050055501597,0.35576626268671,0.33472061276467,0.805658634218294,0,1.46437234528902,0.735326160691737,4.86085168729056,0.625098097988558,0.44905874525234,0.563057402416611,3.06633274931766,1.89853131913626,1.09921046358244,0,0,2.61656431285521,0.993943903390637,2.27934920996244,0.794455084879313,2.86836620748814,1.77334191099179,5.60677600142307,4.2699598291882,4.19334832309172,3.11211035399766,2.02066008104532,3.26923806226917,1.21085942115945,1.15235184896,3.51482147750695,1.5608003841516,2.85235910772225,3.43731965269142,1.05691048779388,0.647491777472526,0.421352420106746,1.22492502752936,0.61417158655884,1.96318984233954,3.56400857184616,5.19260551484969,1.82032272387605,5.03032699271367,0.168336113954066,1.00094815897571,0.554128230968366,3.07284334616587,3.67785354958824,2.85452311922534,4.19699077692078,1.4351170855109,4.27114777637135,1.48352330811693,0.900273288253207,2.67936576019941,2.57640540045629,2.97786970130544,1.0126579934476,1.75386609290158,0.504867548488229,2.76149695926898,1.93975268182574,1.42003837006646,0.806016785821122,3.05209066158878,0.773043412653187,0.818238361772504,0,0.487894824518382,0,0.116193942869518,0.414644220061482,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,2.78620756819187,2.88751792667834,2.24782920075703,1.68584690078102,2.41011029883482,1.65440959098591,1.08939722046203,0.949082476444386,3.37078270400411,1.76599318612811,2.69323009862473,0.738155454624648,7.01208869017229,3.7041661019826,5.88034845542168,1.26755034821831,5.89696330006576,3.54473944008842,0,0.245976877086227,3.77449182656756,1.09750285408626,4.49607013030478,1.3068766413512,1.574003567695,1.62904152655162,1.03993478527958,2.88662684050547,0.463721619900307,2.81780866165972,1.87676382089396,4.1668696131895,1.52203321787679,0,0,0.492434012174795,0.936017060556951,1.93220510975347,0,1.00789276919316,0.708875486211932,1.70161193135412,0,3.06706143332169,0,0.44024217006613,0.621984346622316,1.29707958075265,2.14612136824846,1.14296209725904,3.81988425558278,1.17217447210047,8.55362230113526,2.36503233217644,1.20137223137567,1.42913216315289,1.23344192779897,1.30788020649984,1.68678057388185,2.58543431515556,14.3062578340753,3.381211010224,3.45719551560332,2.08014873822732,3.85811061393213,8.5109479213967,2.93064396917709,4.28933980974443,3.25572963234866,4.93944202068461,3.90883421152482,3.55391948742546,2.37585561880029,0,1.74306691720059,1.99945982364114,2.43247561282381,1.00451418286425,4.21667878966063,2.15662369942424,2.29723871668228,1.42636905040718,1.59259437334337,2.67119219315498,1.07436577943937,0,0,0,0,2.54094624222463,1.30139853857622,4.63973287666617,1.00509759200609,3.18969375826582,0,0,0,3.80343624329334,0,1.35632511849868,3.53550464602372,4.81758269752337,2.99634588564476,3.74852527976682,3.61135319673263,0,10.3473071292505,3.98535359121262,5.53107505625109,0.868836144680828,3.91602314925481,2.05886054286514,0,0,0,0.909382714338778,0,1.5119514666484,1.73675465473144,1.2276957863045,4.77122160536225,2.56278298511402,2.04682899626681,5.14732547659544,5.93672265779964,4.62629081407967,4.97172830876756,2.13530605635904,1.55776328755086,2.5566283261191,2.05461064305758,0.601519410909855,0.920809889358963,1.26295892981067,2.36718518408732,2.88473712910733,0.902399225814824,1.23224539367064,2.35304930753057,1.46139224653261,2.21658420675039,3.4120015221269,0.340187410553031,1.0795795805107,6.16909010761157,2.70946437543853,7.02365683396795,0.764628819135115,4.15538004464362,1.34324852833307,0,0,1.28225062558195,2.62411716559765,3.25378394664303,1.854738209659,0.54941678891006,0.4125474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| |||
|short_description=p3@PXDC1 | |||
}} |
Revision as of 20:51, 13 September 2013
Short description: | p3@PXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PXDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_NM_183373, uc003mvt.2_5end |
EntrezGene: | PXDC1 |
HGNC: | 21361 |
UniProt: | Q5TGL8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.15e-11 | 76 |
mesodermal cell | 1.07e-07 | 121 |
embryonic cell | 1.80e-07 | 250 |
muscle precursor cell | 3.74e-07 | 58 |
myoblast | 3.74e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.74e-07 | 58 |
muscle cell | 9.33e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.73e-11 | 117 |
mesenchyme | 9.44e-11 | 160 |
entire embryonic mesenchyme | 9.44e-11 | 160 |
cell layer | 2.73e-10 | 309 |
epithelium | 5.23e-10 | 306 |
trunk mesenchyme | 9.57e-10 | 122 |
epithelial vesicle | 3.63e-09 | 78 |
vasculature | 3.48e-08 | 78 |
vascular system | 3.48e-08 | 78 |
somite | 1.59e-07 | 71 |
presomitic mesoderm | 1.59e-07 | 71 |
presumptive segmental plate | 1.59e-07 | 71 |
dermomyotome | 1.59e-07 | 71 |
trunk paraxial mesoderm | 1.59e-07 | 71 |
dense mesenchyme tissue | 1.84e-07 | 73 |
splanchnic layer of lateral plate mesoderm | 1.95e-07 | 83 |
multilaminar epithelium | 2.64e-07 | 83 |
paraxial mesoderm | 3.28e-07 | 72 |
presumptive paraxial mesoderm | 3.28e-07 | 72 |
skeletal muscle tissue | 3.42e-07 | 62 |
striated muscle tissue | 3.42e-07 | 62 |
myotome | 3.42e-07 | 62 |
unilaminar epithelium | 3.72e-07 | 148 |
adipose tissue | 4.07e-07 | 14 |
muscle tissue | 4.81e-07 | 64 |
musculature | 4.81e-07 | 64 |
musculature of body | 4.81e-07 | 64 |
cardiovascular system | 8.01e-07 | 109 |
vessel | 9.34e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.