FFCP PHASE1:Hg19::chr7:105241301..105241307,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=34531|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_ENST00000490493_5end|coexpression_cluster_id=C87|description=CAGE_peak_4_at_EFCAB10_5end|id=chr7:105241301..105241307,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000243;7.76e-09;15!CL:0000125;7.76e-09;15!CL:0000095;5.25e-08;17|ontology_enrichment_celltype_v019_2=CL:0000243,7.61e-09,15;CL:0000125,7.61e-09,15;CL:0000030,7.61e-09,15;CL:0000339,7.61e-09,15;CL:0000095,5.16e-08,17;CL:0000123,5.16e-08,17|ontology_enrichment_development_v019=UBERON:0006238;4.12e-13;10!UBERON:0003056;1.85e-12;3!CL:0000339;7.76e-09;15|ontology_enrichment_disease=DOID:1036!7.11e-40!8;DOID:8692!4.12e-16!31;DOID:1240!7.65e-13!39;DOID:0050686!3.02e-11!137;DOID:2531!7.53e-10!51;DOID:0060083!7.53e-10!51;DOID:3093!1.09e-07!11|ontology_enrichment_disease_v019=DOID:1036;1.61e-37;8!DOID:3093;4.18e-12;11!DOID:8692;1.23e-10;31!DOID:5409;1.57e-09;4!DOID:1240;1.61e-08;39|ontology_enrichment_disease_v019_2=DOID:1036,1.95e-37,8;DOID:3093,4.07e-12,11;DOID:8692,2.68e-10,31;DOID:5409,1.44e-09,4;DOID:0050686,5.05e-09,137;DOID:1240,2.48e-08,39|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000966;5.35e-08;5!UBERON:0005388;5.35e-08;5!UBERON:0001802;5.35e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57916962432026,2.15668787749514,1.1747511088309,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9571161620836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@EFCAB10}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34531 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000490493_5end | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_4_at_EFCAB10_5end | |||
|id=chr7:105241301..105241307,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;7.76e-09;15!CL:0000125;7.76e-09;15!CL:0000095;5.25e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,7.61e-09,15;CL:0000125,7.61e-09,15;CL:0000030,7.61e-09,15;CL:0000339,7.61e-09,15;CL:0000095,5.16e-08,17;CL:0000123,5.16e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.12e-13;10!UBERON:0003056;1.85e-12;3!CL:0000339;7.76e-09;15 | |||
|ontology_enrichment_disease=DOID:1036!7.11e-40!8;DOID:8692!4.12e-16!31;DOID:1240!7.65e-13!39;DOID:0050686!3.02e-11!137;DOID:2531!7.53e-10!51;DOID:0060083!7.53e-10!51;DOID:3093!1.09e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.61e-37;8!DOID:3093;4.18e-12;11!DOID:8692;1.23e-10;31!DOID:5409;1.57e-09;4!DOID:1240;1.61e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.95e-37,8;DOID:3093,4.07e-12,11;DOID:8692,2.68e-10,31;DOID:5409,1.44e-09,4;DOID:0050686,5.05e-09,137;DOID:1240,2.48e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;5.35e-08;5!UBERON:0005388;5.35e-08;5!UBERON:0001802;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.17e-07,6;UBERON:0005388,7.17e-07,6;UBERON:0001802,7.17e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57916962432026,2.15668787749514,1.1747511088309,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90532133366085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9571161620836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64910775118144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@EFCAB10 | |||
}} |
Revision as of 22:32, 13 September 2013
Short description: | p4@EFCAB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_EFCAB10_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 14bp_to_ENST00000490493_5end |
EntrezGene: | NA |
HGNC: | 34531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 7.61e-09 | 15 |
glial cell | 7.61e-09 | 15 |
glioblast | 7.61e-09 | 15 |
glioblast (sensu Vertebrata) | 7.61e-09 | 15 |
neuron associated cell | 5.16e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.16e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
retina | 7.17e-07 | 6 |
photoreceptor array | 7.17e-07 | 6 |
posterior segment of eyeball | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.95e-37 | 8 |
nervous system cancer | 4.07e-12 | 11 |
myeloid leukemia | 2.68e-10 | 31 |
lung small cell carcinoma | 1.44e-09 | 4 |
organ system cancer | 5.05e-09 | 137 |
leukemia | 2.48e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.