FFCP PHASE1:Mm9::chr2:22660147..22660159,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=250|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:22660147..22660159,+|id=chr2:22660147..22660159,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.87e-18!29;UBERON:0005057!2.97e-15!51;UBERON:0002370!2.03e-14!23;UBERON:0000974!2.03e-14!23;UBERON:0004807!2.03e-14!23;UBERON:0005058!2.03e-14!23;UBERON:0003351!2.03e-14!23;UBERON:0009113!2.03e-14!23;UBERON:0003295!2.03e-14!23;UBERON:0009722!2.03e-14!23;UBERON:0005562!2.03e-14!23;UBERON:0007690!2.03e-14!23;UBERON:0002390!1.26e-13!45;UBERON:0003061!1.26e-13!45;UBERON:0002193!1.32e-13!48;UBERON:0006562!1.40e-13!24;UBERON:0003408!1.40e-13!24;UBERON:0001557!1.40e-13!24;UBERON:0001042!1.40e-13!24;UBERON:0008814!1.40e-13!24;UBERON:0009145!1.40e-13!24;UBERON:0002405!2.33e-13!70;UBERON:0003081!4.56e-13!88;UBERON:0000072!1.92e-11!27;UBERON:0000926!2.10e-11!193;UBERON:0004120!2.10e-11!193;UBERON:0006603!2.10e-11!193;UBERON:0000065!3.34e-11!41;UBERON:0001004!9.10e-11!42;UBERON:0003104!1.14e-10!131;UBERON:0009142!1.14e-10!131;UBERON:0001041!3.61e-10!92;UBERON:0002368!5.04e-10!60;UBERON:0000077!6.60e-10!97;UBERON:0005911!2.88e-09!69;UBERON:0001048!1.17e-08!147;UBERON:0000063!1.21e-08!35;UBERON:0002530!1.28e-08!65;UBERON:0003929!2.47e-08!55;UBERON:0000490!5.10e-08!66;UBERON:0000949!9.19e-08!72;UBERON:0004119!2.45e-07!130;UBERON:0000925!2.45e-07!130;UBERON:0006595!2.45e-07!130;UBERON:0004921!2.81e-07!126;UBERON:0004185!2.81e-07!126;UBERON:0001007!5.48e-07!128;UBERON:0001555!5.48e-07!128;UBERON:0007026!5.48e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.67e-14,23;UBERON:0000974,8.67e-14,23;UBERON:0004807,8.67e-14,23;UBERON:0005058,8.67e-14,23;UBERON:0003351,8.67e-14,23;UBERON:0009113,8.67e-14,23;UBERON:0003295,8.67e-14,23;UBERON:0009722,8.67e-14,23;UBERON:0005562,8.67e-14,23;UBERON:0007690,8.67e-14,23;UBERON:0006562,3.28e-13,24;UBERON:0003408,3.28e-13,24;UBERON:0001557,3.28e-13,24;UBERON:0001042,3.28e-13,24;UBERON:0008814,3.28e-13,24;UBERON:0009145,3.28e-13,24;UBERON:0000072,9.85e-12,27;UBERON:0004177,6.46e-11,29;UBERON:0005057,6.46e-11,29;UBERON:0000065,2.63e-10,41;UBERON:0001004,4.71e-10,42;UBERON:0002390,2.54e-09,45;UBERON:0003061,2.54e-09,45;UBERON:0000077,5.07e-09,35;UBERON:0007811,9.13e-09,36;UBERON:0002193,1.02e-08,48;UBERON:0002405,1.02e-08,48;UBERON:0005911,7.73e-08,69;UBERON:0003929,1.16e-07,55;UBERON:0000153,2.62e-07,43;UBERON:0002368,5.44e-07,60|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.398860794976682,0.171200729931206,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0.486405680325106,0.549122826376163,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.655453258862952,1.20879487306127,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.841368146639782,1.18151621739662,1.31256384932592,1.905170166375,2.72230699869469,0.974578807397524,1.53938946624527,1.5193997283604,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:22660147..22660159,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=250 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:22660147..22660159,+ | |||
|id=chr2:22660147..22660159,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.87e-18!29;UBERON:0005057!2.97e-15!51;UBERON:0002370!2.03e-14!23;UBERON:0000974!2.03e-14!23;UBERON:0004807!2.03e-14!23;UBERON:0005058!2.03e-14!23;UBERON:0003351!2.03e-14!23;UBERON:0009113!2.03e-14!23;UBERON:0003295!2.03e-14!23;UBERON:0009722!2.03e-14!23;UBERON:0005562!2.03e-14!23;UBERON:0007690!2.03e-14!23;UBERON:0002390!1.26e-13!45;UBERON:0003061!1.26e-13!45;UBERON:0002193!1.32e-13!48;UBERON:0006562!1.40e-13!24;UBERON:0003408!1.40e-13!24;UBERON:0001557!1.40e-13!24;UBERON:0001042!1.40e-13!24;UBERON:0008814!1.40e-13!24;UBERON:0009145!1.40e-13!24;UBERON:0002405!2.33e-13!70;UBERON:0003081!4.56e-13!88;UBERON:0000072!1.92e-11!27;UBERON:0000926!2.10e-11!193;UBERON:0004120!2.10e-11!193;UBERON:0006603!2.10e-11!193;UBERON:0000065!3.34e-11!41;UBERON:0001004!9.10e-11!42;UBERON:0003104!1.14e-10!131;UBERON:0009142!1.14e-10!131;UBERON:0001041!3.61e-10!92;UBERON:0002368!5.04e-10!60;UBERON:0000077!6.60e-10!97;UBERON:0005911!2.88e-09!69;UBERON:0001048!1.17e-08!147;UBERON:0000063!1.21e-08!35;UBERON:0002530!1.28e-08!65;UBERON:0003929!2.47e-08!55;UBERON:0000490!5.10e-08!66;UBERON:0000949!9.19e-08!72;UBERON:0004119!2.45e-07!130;UBERON:0000925!2.45e-07!130;UBERON:0006595!2.45e-07!130;UBERON:0004921!2.81e-07!126;UBERON:0004185!2.81e-07!126;UBERON:0001007!5.48e-07!128;UBERON:0001555!5.48e-07!128;UBERON:0007026!5.48e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.67e-14,23;UBERON:0000974,8.67e-14,23;UBERON:0004807,8.67e-14,23;UBERON:0005058,8.67e-14,23;UBERON:0003351,8.67e-14,23;UBERON:0009113,8.67e-14,23;UBERON:0003295,8.67e-14,23;UBERON:0009722,8.67e-14,23;UBERON:0005562,8.67e-14,23;UBERON:0007690,8.67e-14,23;UBERON:0006562,3.28e-13,24;UBERON:0003408,3.28e-13,24;UBERON:0001557,3.28e-13,24;UBERON:0001042,3.28e-13,24;UBERON:0008814,3.28e-13,24;UBERON:0009145,3.28e-13,24;UBERON:0000072,9.85e-12,27;UBERON:0004177,6.46e-11,29;UBERON:0005057,6.46e-11,29;UBERON:0000065,2.63e-10,41;UBERON:0001004,4.71e-10,42;UBERON:0002390,2.54e-09,45;UBERON:0003061,2.54e-09,45;UBERON:0000077,5.07e-09,35;UBERON:0007811,9.13e-09,36;UBERON:0002193,1.02e-08,48;UBERON:0002405,1.02e-08,48;UBERON:0005911,7.73e-08,69;UBERON:0003929,1.16e-07,55;UBERON:0000153,2.62e-07,43;UBERON:0002368,5.44e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.398860794976682,0.171200729931206,0.262261207256992,0.333109761815663,0.202475267389826,0,0,0.137114433605739,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0,0.251793635951155,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.330418782983798,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0,0.486405680325106,0.549122826376163,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.44292937929755,0,0.655453258862952,1.20879487306127,0.578596234326046,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,0,0,0,0.108005340821801,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.179026695667481,0.596044064343795,0.841368146639782,1.18151621739662,1.31256384932592,1.905170166375,2.72230699869469,0.974578807397524,1.53938946624527,1.5193997283604,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:22660147..22660159,+ | |||
}} |
Revision as of 23:21, 13 September 2013
Short description: | p@chr2:22660147..22660159, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:22660147..22660159, + |
Coexpression cluster: | MCL_coexpression_mm9:250 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.67e-14 | 23 |
neck | 8.67e-14 | 23 |
respiratory system epithelium | 8.67e-14 | 23 |
hemolymphoid system gland | 8.67e-14 | 23 |
pharyngeal epithelium | 8.67e-14 | 23 |
thymic region | 8.67e-14 | 23 |
pharyngeal gland | 8.67e-14 | 23 |
entire pharyngeal arch endoderm | 8.67e-14 | 23 |
thymus primordium | 8.67e-14 | 23 |
early pharyngeal endoderm | 8.67e-14 | 23 |
pharynx | 3.28e-13 | 24 |
gland of gut | 3.28e-13 | 24 |
upper respiratory tract | 3.28e-13 | 24 |
chordate pharynx | 3.28e-13 | 24 |
pharyngeal arch system | 3.28e-13 | 24 |
pharyngeal region of foregut | 3.28e-13 | 24 |
segment of respiratory tract | 9.85e-12 | 27 |
hemopoietic organ | 6.46e-11 | 29 |
immune organ | 6.46e-11 | 29 |
respiratory tract | 2.63e-10 | 41 |
respiratory system | 4.71e-10 | 42 |
hematopoietic system | 2.54e-09 | 45 |
blood island | 2.54e-09 | 45 |
mixed endoderm/mesoderm-derived structure | 5.07e-09 | 35 |
craniocervical region | 9.13e-09 | 36 |
hemolymphoid system | 1.02e-08 | 48 |
immune system | 1.02e-08 | 48 |
endo-epithelium | 7.73e-08 | 69 |
gut epithelium | 1.16e-07 | 55 |
anterior region of body | 2.62e-07 | 43 |
endocrine gland | 5.44e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.