Personal tools

FFCP PHASE1:Mm9::chr2:34228111..34228118,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2346|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:34228111..34228118,-|id=chr2:34228111..34228118,-|ontology_enrichment_celltype=CL:0000117!4.97e-11!23;CL:0000337!4.97e-11!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-28,23;CL:0000337,1.88e-28,23;CL:0000540,4.92e-19,33;CL:0000047,4.92e-19,33;CL:0000031,4.92e-19,33;CL:0000404,4.92e-19,33;CL:0000393,1.07e-15,39;CL:0000211,1.07e-15,39;CL:0002319,5.45e-14,43;CL:0000221,1.30e-13,44;CL:0000133,1.30e-13,44;CL:0000120,2.10e-12,3;CL:0002613,2.37e-11,3;CL:0002611,2.50e-08,2;CL:0002321,1.43e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.23e-10!71;UBERON:0003075!3.23e-10!71;UBERON:0007284!3.23e-10!71;UBERON:0004121!3.82e-09!102;UBERON:0000924!3.82e-09!102;UBERON:0006601!3.82e-09!102|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.97e-12,5;UBERON:0002315,5.97e-12,5;UBERON:0000369,1.38e-11,5;UBERON:0002435,1.38e-11,5;UBERON:0000204,1.38e-11,5;UBERON:0010082,1.38e-11,5;UBERON:0002020,7.74e-11,34;UBERON:0002420,8.24e-11,8;UBERON:0007245,8.24e-11,8;UBERON:0010009,8.24e-11,8;UBERON:0010011,8.24e-11,8;UBERON:0000454,8.24e-11,8;UBERON:0002240,5.63e-10,6;UBERON:0005174,5.63e-10,6;UBERON:0001137,5.63e-10,6;UBERON:0001017,8.67e-10,73;UBERON:0001016,1.91e-09,75;UBERON:0002369,1.46e-08,7;UBERON:0006858,1.46e-08,7;UBERON:0002256,2.50e-08,2;UBERON:0004121,7.08e-08,95;UBERON:0000924,7.08e-08,95;UBERON:0006601,7.08e-08,95;UBERON:0000073,2.49e-07,54;UBERON:0010314,5.46e-07,92|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,4.24864567805155,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,0,0.405017814995072,0.630974884054146,2.28520787523043,1.54607978666129,0.979926393719632,1.91690942036473,1.83843757322004,0,0.383062014255563,1.0752457327937,2.76961204233407,1.00636407962651,2.08365348222704,1.11673199600552,0,0.763991238884051,1.17851434189467,0.569486723196412,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,3.56261133755579,1.04091196059682,0.913396434936424,1.84492397804847,0.904335843315735,0.940709657085638,3.01599819191221,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.748953197024114,0.915001205637253,1.25654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.816437989815934,0.12811372028485,0.843315521037559,1.29351685369508,0.215567992932842,0,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.658239399653922,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0.246794327843601,0.592905254174298,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.390438744296638,0.430846795465598,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,3.85585579706168,0,0.178065603667255,0.162886959353576,0,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0,0.532020700926821,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.258319646955462,0.168956125490778,0,0.39061315453185,0.524296722128554,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.538283139656854,0.167884616364078,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,1.45302286617847,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr2:34228111..34228118,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=2346
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr2:34228111..34228118,-
|id=chr2:34228111..34228118,-
|ontology_enrichment_celltype=CL:0000117!4.97e-11!23;CL:0000337!4.97e-11!23;CL:0000393!1.69e-10!39;CL:0000211!1.69e-10!39;CL:0000540!3.80e-10!33;CL:0000047!3.80e-10!33;CL:0000031!3.80e-10!33;CL:0000404!3.80e-10!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-28,23;CL:0000337,1.88e-28,23;CL:0000540,4.92e-19,33;CL:0000047,4.92e-19,33;CL:0000031,4.92e-19,33;CL:0000404,4.92e-19,33;CL:0000393,1.07e-15,39;CL:0000211,1.07e-15,39;CL:0002319,5.45e-14,43;CL:0000221,1.30e-13,44;CL:0000133,1.30e-13,44;CL:0000120,2.10e-12,3;CL:0002613,2.37e-11,3;CL:0002611,2.50e-08,2;CL:0002321,1.43e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.23e-10!71;UBERON:0003075!3.23e-10!71;UBERON:0007284!3.23e-10!71;UBERON:0004121!3.82e-09!102;UBERON:0000924!3.82e-09!102;UBERON:0006601!3.82e-09!102
|ontology_enrichment_uberon_v019_2=UBERON:0001948,5.97e-12,5;UBERON:0002315,5.97e-12,5;UBERON:0000369,1.38e-11,5;UBERON:0002435,1.38e-11,5;UBERON:0000204,1.38e-11,5;UBERON:0010082,1.38e-11,5;UBERON:0002020,7.74e-11,34;UBERON:0002420,8.24e-11,8;UBERON:0007245,8.24e-11,8;UBERON:0010009,8.24e-11,8;UBERON:0010011,8.24e-11,8;UBERON:0000454,8.24e-11,8;UBERON:0002240,5.63e-10,6;UBERON:0005174,5.63e-10,6;UBERON:0001137,5.63e-10,6;UBERON:0001017,8.67e-10,73;UBERON:0001016,1.91e-09,75;UBERON:0002369,1.46e-08,7;UBERON:0006858,1.46e-08,7;UBERON:0002256,2.50e-08,2;UBERON:0004121,7.08e-08,95;UBERON:0000924,7.08e-08,95;UBERON:0006601,7.08e-08,95;UBERON:0000073,2.49e-07,54;UBERON:0010314,5.46e-07,92
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,4.24864567805155,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,0,0.405017814995072,0.630974884054146,2.28520787523043,1.54607978666129,0.979926393719632,1.91690942036473,1.83843757322004,0,0.383062014255563,1.0752457327937,2.76961204233407,1.00636407962651,2.08365348222704,1.11673199600552,0,0.763991238884051,1.17851434189467,0.569486723196412,3.72798891650601,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0.258937883647172,3.56261133755579,1.04091196059682,0.913396434936424,1.84492397804847,0.904335843315735,0.940709657085638,3.01599819191221,0,0,0,0,0,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0,0,0.748953197024114,0.915001205637253,1.25654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.816437989815934,0.12811372028485,0.843315521037559,1.29351685369508,0.215567992932842,0,0,0,0.556094498451196,0,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.658239399653922,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0,0,0.246794327843601,0.592905254174298,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0.390438744296638,0.430846795465598,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,3.85585579706168,0,0.178065603667255,0.162886959353576,0,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0,0.532020700926821,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0.170870880797853,0.206386867963223,0.555583582109135,0,0,0,0,0.139951452323658,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0,0.56369293868419,0.149516546043979,0,0.583353565032143,0.258319646955462,0.168956125490778,0,0.39061315453185,0.524296722128554,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.538283139656854,0.167884616364078,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,1.45302286617847,1.19707462020309,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0.476293691283074,0.695305955669133,0.578727661391115,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.464810523557898,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0
|short_description=p@chr2:34228111..34228118,-
}}

Revision as of 23:52, 13 September 2013

Short description:p@chr2:34228111..34228118, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:34228111..34228118, -
Coexpression cluster:MCL_coexpression_mm9:2346
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr2:34228111..34228118-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of spinal cord5.97e-125
gray matter of spinal cord5.97e-125
corpus striatum1.38e-115
striatum1.38e-115
ventral part of telencephalon1.38e-115
future corpus striatum1.38e-115
gray matter7.74e-1134
basal ganglion8.24e-118
nuclear complex of neuraxis8.24e-118
aggregate regional part of brain8.24e-118
collection of basal ganglia8.24e-118
cerebral subcortex8.24e-118
spinal cord5.63e-106
dorsal region element5.63e-106
dorsum5.63e-106
central nervous system8.67e-1073
nervous system1.91e-0975
adrenal gland1.46e-087
adrenal/interrenal gland1.46e-087
dorsal horn of spinal cord2.50e-082
ectoderm-derived structure7.08e-0895
ectoderm7.08e-0895
presumptive ectoderm7.08e-0895
regional part of nervous system2.49e-0754
structure with developmental contribution from neural crest5.46e-0792







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:34228111..34228118,-&oldid=2987045"