FFCP PHASE1:Hg19::chr7:47492890..47492923,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64759|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21616|TSSclassifier=S|UniProt=C9JWN9|association_with_transcript=-61bp_to_ENST00000413551_5end|description=CAGE_peak_8_at_TNS3_5end|id=chr7:47492890..47492923,-|ontology_enrichment_celltype=CL:0000222!4.25e-11!119;CL:0000115!4.97e-11!35;CL:0002078!6.91e-11!44;CL:0002139!1.92e-10!24;CL:0000071!3.44e-10!18;CL:0002546!3.44e-10!18;CL:0000220!8.64e-09!246;CL:0002321!1.87e-08!248;CL:0000066!7.69e-08!254;CL:0000213!1.25e-07!57;CL:0000215!1.25e-07!57|ontology_enrichment_celltype_v019=CL:0000071;4.54e-15;18!CL:0000115;3.24e-12;36!CL:0002139;1.21e-11;24!CL:0002078;5.47e-09;45!CL:1000413;2.39e-08;9!CL:0000235;3.63e-08;6!CL:0002544;1.15e-07;6!CL:0002543;1.42e-07;6!CL:1000507;3.05e-07;10!CL:1000494;3.05e-07;10!CL:0000056;6.96e-07;4|ontology_enrichment_celltype_v019_2=CL:0000071,2.69e-15,18;CL:0002546,2.69e-15,18;CL:0002078,2.89e-14,45;CL:0000115,1.31e-13,36;CL:0002139,9.29e-12,24;CL:0000222,2.22e-11,121;CL:1000413,1.56e-08,9;CL:0000235,3.02e-08,6;CL:0002544,1.04e-07,6;CL:0002543,1.35e-07,6;CL:0000213,2.35e-07,58;CL:0000215,2.35e-07,58;CL:1000507,5.20e-07,10;CL:1000494,5.20e-07,10;CL:0000515,6.34e-07,4|ontology_enrichment_development_v019=CL:0002546;4.54e-15;18!CL:0000515;6.96e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000467!3.70e-11!625;UBERON:0000480!5.25e-11!626;UBERON:0001986!3.44e-10!18;UBERON:0004638!3.44e-10!18;UBERON:0004852!3.44e-10!18;UBERON:0002100!4.12e-10!216;UBERON:0000468!5.83e-10!659;UBERON:0000487!2.24e-09!22;UBERON:0000464!3.59e-09!104;UBERON:0000055!3.90e-09!69;UBERON:0004111!8.65e-09!241;UBERON:0002049!1.35e-08!79;UBERON:0007798!1.35e-08!79;UBERON:0006914!4.51e-08!25;UBERON:0001981!5.70e-08!60;UBERON:0007500!5.70e-08!60;UBERON:0004537!5.70e-08!60;UBERON:0006965!5.70e-08!60;UBERON:0000483!6.09e-08!309;UBERON:0003914!8.94e-08!118;UBERON:0000119!1.06e-07!312;UBERON:0000475!1.07e-07!365;UBERON:0002553!1.27e-07!70;UBERON:0003104!1.32e-07!238;UBERON:0009142!1.32e-07!238;UBERON:0005256!2.73e-07!143;UBERON:0000486!4.45e-07!82;UBERON:0000490!6.02e-07!138;UBERON:0000466!6.99e-07!126;UBERON:0000477!7.45e-07!286|ontology_enrichment_uberon_v019=UBERON:0004638;4.54e-15;18!UBERON:0001986;4.54e-15;18!UBERON:0004852;4.54e-15;18!UBERON:0000487;2.49e-13;22!UBERON:0006914;4.00e-11;25!UBERON:0003914;3.32e-10;74!UBERON:0004573;1.19e-09;33!UBERON:0004571;1.19e-09;33!UBERON:0000025;2.63e-09;93!UBERON:0000490;1.40e-08;33!UBERON:0007500;2.06e-08;56!UBERON:0001981;2.06e-08;56!UBERON:0004537;2.06e-08;56!UBERON:0001637;2.09e-08;42!UBERON:0003509;2.09e-08;42!UBERON:0004572;2.09e-08;42!UBERON:0003915;2.39e-08;9!UBERON:0004700;2.39e-08;9!UBERON:0001917;2.39e-08;9!UBERON:0000055;1.70e-07;65!UBERON:0004211;3.05e-07;10!UBERON:0009773;3.05e-07;10!UBERON:0001231;3.05e-07;10!UBERON:0004810;3.05e-07;10!UBERON:0004111;8.44e-07;130|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.69e-15,18;UBERON:0001986,2.69e-15,18;UBERON:0004852,2.69e-15,18;UBERON:0007500,1.15e-13,59;UBERON:0001981,1.15e-13,59;UBERON:0004537,1.15e-13,59;UBERON:0006965,1.15e-13,59;UBERON:0000487,1.66e-13,22;UBERON:0000055,2.35e-13,68;UBERON:0002100,1.47e-11,199;UBERON:0003914,1.77e-11,117;UBERON:0006914,2.83e-11,25;UBERON:0004573,9.97e-11,33;UBERON:0004571,9.97e-11,33;UBERON:0002049,2.31e-10,78;UBERON:0007798,2.31e-10,78;UBERON:0000490,6.61e-10,148;UBERON:0004872,1.59e-09,83;UBERON:0001637,2.84e-09,42;UBERON:0003509,2.84e-09,42;UBERON:0004572,2.84e-09,42;UBERON:0003915,1.56e-08,9;UBERON:0004700,1.56e-08,9;UBERON:0001917,1.56e-08,9;UBERON:0004111,2.45e-08,240;UBERON:0000483,3.44e-08,306;UBERON:0000119,6.40e-08,309;UBERON:0000486,3.18e-07,83;UBERON:0006555,4.16e-07,16;UBERON:0004819,4.16e-07,16;UBERON:0004810,5.20e-07,10|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.737201809504527,0.697801167972428,5.46103430325431,3.4289707169699,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,3.614471025339,0,0,0,0,0,0,0,15.0023367740749,6.47787332037959,8.24241816429397,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,1.5905718941022,1.45990461090791,0.283604451492204,0.443458794925128,0.087834785693126,0.589405839739707,1.09288586487763,0,0.324547393654683,1.39303789839414,2.12732736830184,0,0,0,3.7764857399674,2.58070378531837,6.59566953054429,1.69592382577203,0,1.92582629358047,4.17989933073621,0,0.35576626268671,0.66944122552934,2.81980521976403,0.760272105718513,2.19655851793353,1.10298924103761,3.24056779152704,1.16089646769304,1.79623498100936,2.47745257063309,3.06633274931766,3.79706263827252,4.03043836646896,0,0,0,0.49697195169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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |||
|TSSclassifier=S | |||
|UniProt=C9JWN9 | |||
|association_with_transcript=-61bp_to_ENST00000413551_5end | |||
|description=CAGE_peak_8_at_TNS3_5end | |||
|id=chr7:47492890..47492923,- | |||
|ontology_enrichment_celltype=CL:0000222!4.25e-11!119;CL:0000115!4.97e-11!35;CL:0002078!6.91e-11!44;CL:0002139!1.92e-10!24;CL:0000071!3.44e-10!18;CL:0002546!3.44e-10!18;CL:0000220!8.64e-09!246;CL:0002321!1.87e-08!248;CL:0000066!7.69e-08!254;CL:0000213!1.25e-07!57;CL:0000215!1.25e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.54e-15;18!CL:0000115;3.24e-12;36!CL:0002139;1.21e-11;24!CL:0002078;5.47e-09;45!CL:1000413;2.39e-08;9!CL:0000235;3.63e-08;6!CL:0002544;1.15e-07;6!CL:0002543;1.42e-07;6!CL:1000507;3.05e-07;10!CL:1000494;3.05e-07;10!CL:0000056;6.96e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,2.69e-15,18;CL:0002546,2.69e-15,18;CL:0002078,2.89e-14,45;CL:0000115,1.31e-13,36;CL:0002139,9.29e-12,24;CL:0000222,2.22e-11,121;CL:1000413,1.56e-08,9;CL:0000235,3.02e-08,6;CL:0002544,1.04e-07,6;CL:0002543,1.35e-07,6;CL:0000213,2.35e-07,58;CL:0000215,2.35e-07,58;CL:1000507,5.20e-07,10;CL:1000494,5.20e-07,10;CL:0000515,6.34e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;4.54e-15;18!CL:0000515;6.96e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!3.70e-11!625;UBERON:0000480!5.25e-11!626;UBERON:0001986!3.44e-10!18;UBERON:0004638!3.44e-10!18;UBERON:0004852!3.44e-10!18;UBERON:0002100!4.12e-10!216;UBERON:0000468!5.83e-10!659;UBERON:0000487!2.24e-09!22;UBERON:0000464!3.59e-09!104;UBERON:0000055!3.90e-09!69;UBERON:0004111!8.65e-09!241;UBERON:0002049!1.35e-08!79;UBERON:0007798!1.35e-08!79;UBERON:0006914!4.51e-08!25;UBERON:0001981!5.70e-08!60;UBERON:0007500!5.70e-08!60;UBERON:0004537!5.70e-08!60;UBERON:0006965!5.70e-08!60;UBERON:0000483!6.09e-08!309;UBERON:0003914!8.94e-08!118;UBERON:0000119!1.06e-07!312;UBERON:0000475!1.07e-07!365;UBERON:0002553!1.27e-07!70;UBERON:0003104!1.32e-07!238;UBERON:0009142!1.32e-07!238;UBERON:0005256!2.73e-07!143;UBERON:0000486!4.45e-07!82;UBERON:0000490!6.02e-07!138;UBERON:0000466!6.99e-07!126;UBERON:0000477!7.45e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.54e-15;18!UBERON:0001986;4.54e-15;18!UBERON:0004852;4.54e-15;18!UBERON:0000487;2.49e-13;22!UBERON:0006914;4.00e-11;25!UBERON:0003914;3.32e-10;74!UBERON:0004573;1.19e-09;33!UBERON:0004571;1.19e-09;33!UBERON:0000025;2.63e-09;93!UBERON:0000490;1.40e-08;33!UBERON:0007500;2.06e-08;56!UBERON:0001981;2.06e-08;56!UBERON:0004537;2.06e-08;56!UBERON:0001637;2.09e-08;42!UBERON:0003509;2.09e-08;42!UBERON:0004572;2.09e-08;42!UBERON:0003915;2.39e-08;9!UBERON:0004700;2.39e-08;9!UBERON:0001917;2.39e-08;9!UBERON:0000055;1.70e-07;65!UBERON:0004211;3.05e-07;10!UBERON:0009773;3.05e-07;10!UBERON:0001231;3.05e-07;10!UBERON:0004810;3.05e-07;10!UBERON:0004111;8.44e-07;130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.69e-15,18;UBERON:0001986,2.69e-15,18;UBERON:0004852,2.69e-15,18;UBERON:0007500,1.15e-13,59;UBERON:0001981,1.15e-13,59;UBERON:0004537,1.15e-13,59;UBERON:0006965,1.15e-13,59;UBERON:0000487,1.66e-13,22;UBERON:0000055,2.35e-13,68;UBERON:0002100,1.47e-11,199;UBERON:0003914,1.77e-11,117;UBERON:0006914,2.83e-11,25;UBERON:0004573,9.97e-11,33;UBERON:0004571,9.97e-11,33;UBERON:0002049,2.31e-10,78;UBERON:0007798,2.31e-10,78;UBERON:0000490,6.61e-10,148;UBERON:0004872,1.59e-09,83;UBERON:0001637,2.84e-09,42;UBERON:0003509,2.84e-09,42;UBERON:0004572,2.84e-09,42;UBERON:0003915,1.56e-08,9;UBERON:0004700,1.56e-08,9;UBERON:0001917,1.56e-08,9;UBERON:0004111,2.45e-08,240;UBERON:0000483,3.44e-08,306;UBERON:0000119,6.40e-08,309;UBERON:0000486,3.18e-07,83;UBERON:0006555,4.16e-07,16;UBERON:0004819,4.16e-07,16;UBERON:0004810,5.20e-07,10 | |||
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| |||
|short_description=p8@TNS3 | |||
}} |
Revision as of 01:27, 14 September 2013
Short description: | p8@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TNS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000413551_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | C9JWN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.69e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.69e-15 | 18 |
meso-epithelial cell | 2.89e-14 | 45 |
endothelial cell | 1.31e-13 | 36 |
endothelial cell of vascular tree | 9.29e-12 | 24 |
mesodermal cell | 2.22e-11 | 121 |
endothelial cell of artery | 1.56e-08 | 9 |
macrophage | 3.02e-08 | 6 |
aortic endothelial cell | 1.04e-07 | 6 |
vein endothelial cell | 1.35e-07 | 6 |
lining cell | 2.35e-07 | 58 |
barrier cell | 2.35e-07 | 58 |
kidney tubule cell | 5.20e-07 | 10 |
nephron tubule epithelial cell | 5.20e-07 | 10 |
skeletal muscle myoblast | 6.34e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.69e-15 | 18 |
endothelium | 2.69e-15 | 18 |
cardiovascular system endothelium | 2.69e-15 | 18 |
epithelial tube open at both ends | 1.15e-13 | 59 |
blood vessel | 1.15e-13 | 59 |
blood vasculature | 1.15e-13 | 59 |
vascular cord | 1.15e-13 | 59 |
simple squamous epithelium | 1.66e-13 | 22 |
vessel | 2.35e-13 | 68 |
trunk | 1.47e-11 | 199 |
epithelial tube | 1.77e-11 | 117 |
squamous epithelium | 2.83e-11 | 25 |
systemic artery | 9.97e-11 | 33 |
systemic arterial system | 9.97e-11 | 33 |
vasculature | 2.31e-10 | 78 |
vascular system | 2.31e-10 | 78 |
unilaminar epithelium | 6.61e-10 | 148 |
splanchnic layer of lateral plate mesoderm | 1.59e-09 | 83 |
artery | 2.84e-09 | 42 |
arterial blood vessel | 2.84e-09 | 42 |
arterial system | 2.84e-09 | 42 |
endothelial tube | 1.56e-08 | 9 |
arterial system endothelium | 1.56e-08 | 9 |
endothelium of artery | 1.56e-08 | 9 |
anatomical conduit | 2.45e-08 | 240 |
epithelium | 3.44e-08 | 306 |
cell layer | 6.40e-08 | 309 |
multilaminar epithelium | 3.18e-07 | 83 |
excretory tube | 4.16e-07 | 16 |
kidney epithelium | 4.16e-07 | 16 |
nephron tubule epithelium | 5.20e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.