FFCP PHASE1:Hg19::chr7:4833949..4833955,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C330|description=CAGE_peak_at_chr7:4833949..4833955,+|id=chr7:4833949..4833955,+|ontology_enrichment_celltype=CL:0000039!2.35e-12!7;CL:0000586!2.35e-12!7;CL:0002541!1.23e-08!3|ontology_enrichment_celltype_v019=CL:0002541;5.37e-20;3!CL:0000039;5.82e-09;7!CL:0000586;5.82e-09;7!CL:0000349;2.37e-07;19|ontology_enrichment_celltype_v019_2=CL:0002541,4.88e-20,3;CL:0000039,5.82e-09,7;CL:0000586,5.82e-09,7;CL:0000349,2.32e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;2.38e-15;1!DOID:326;2.38e-15;1!DOID:3978;2.38e-15;1!DOID:3394;2.38e-15;1!DOID:5844;2.38e-15;1!DOID:3908;1.26e-12;5!DOID:3910;1.20e-08;2!DOID:114;2.48e-08;2!DOID:3193;2.48e-08;2!DOID:962;2.48e-08;2!DOID:3905;2.08e-07;9!DOID:1115;5.45e-07;20|ontology_enrichment_disease_v019_2=DOID:178,2.38e-15,1;DOID:326,2.38e-15,1;DOID:3978,2.38e-15,1;DOID:3394,2.38e-15,1;DOID:5844,2.38e-15,1;DOID:3908,1.26e-12,5;DOID:3910,1.20e-08,2;DOID:114,2.48e-08,2;DOID:3193,2.67e-08,2;DOID:962,2.67e-08,2;DOID:3905,2.08e-07,9;DOID:1115,5.56e-07,20|ontology_enrichment_uberon=UBERON:0001017!4.16e-17!82;UBERON:0000955!1.05e-16!69;UBERON:0006238!1.05e-16!69;UBERON:0005743!5.93e-16!86;UBERON:0002780!1.08e-15!41;UBERON:0001890!1.08e-15!41;UBERON:0006240!1.08e-15!41;UBERON:0001049!1.82e-15!57;UBERON:0005068!1.82e-15!57;UBERON:0006241!1.82e-15!57;UBERON:0007135!1.82e-15!57;UBERON:0003080!3.30e-15!42;UBERON:0000073!5.35e-15!94;UBERON:0001016!5.35e-15!94;UBERON:0001893!1.47e-13!34;UBERON:0002616!3.28e-13!59;UBERON:0001869!6.97e-13!32;UBERON:0002791!2.19e-12!33;UBERON:0002020!5.48e-12!34;UBERON:0003528!5.48e-12!34;UBERON:0000033!3.58e-11!123;UBERON:0000153!2.78e-10!129;UBERON:0007811!2.78e-10!129;UBERON:0003075!3.48e-10!86;UBERON:0007284!3.48e-10!86;UBERON:0003056!3.72e-10!61;UBERON:0004121!1.78e-09!169;UBERON:0002346!1.84e-09!90;UBERON:0000924!4.73e-09!173;UBERON:0006601!4.73e-09!173;UBERON:0000476!1.23e-08!3;UBERON:0000920!1.23e-08!3;UBERON:0002308!2.14e-08!9;UBERON:0000125!2.14e-08!9;UBERON:0009663!7.36e-08!7;UBERON:0007023!5.20e-07!115;UBERON:0001950!9.77e-07!20|ontology_enrichment_uberon_v019=UBERON:0003124;5.37e-20;3!UBERON:0000920;5.37e-20;3!UBERON:0005631;1.82e-13;10!UBERON:0000158;1.82e-13;10!UBERON:0004903;1.20e-08;2!UBERON:0002173;1.20e-08;2!UBERON:0002186;1.20e-08;2!UBERON:0003714;2.48e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.88e-20,3;UBERON:0005631,8.44e-10,14;UBERON:0000158,8.44e-10,14;UBERON:0003124,3.88e-09,7;UBERON:0004903,1.20e-08,2;UBERON:0002173,1.20e-08,2;UBERON:0002186,1.20e-08,2;UBERON:0003714,2.67e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,2.86493381685228,0,0,0,0,0,0,0,0,0,0.251932747854276,0.511343412510774,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,25.6796186795694,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0.46112780877612,1.07709173291727,1.84700532267414,10.8460394308853,0.366390373607449,1.5991043280559,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,8.1174646483826,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,1.73370353940911,0.600420288709789,0.136905378891993,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,9.08162894066896,0,0,0,0,0,0,0,0,0,0,5.79319274070434,0,0,0,0.129282956361551,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr7:4833949..4833955,+ | |||
|id=chr7:4833949..4833955,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.35e-12!7;CL:0000586!2.35e-12!7;CL:0002541!1.23e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.37e-20;3!CL:0000039;5.82e-09;7!CL:0000586;5.82e-09;7!CL:0000349;2.37e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.88e-20,3;CL:0000039,5.82e-09,7;CL:0000586,5.82e-09,7;CL:0000349,2.32e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.38e-15;1!DOID:326;2.38e-15;1!DOID:3978;2.38e-15;1!DOID:3394;2.38e-15;1!DOID:5844;2.38e-15;1!DOID:3908;1.26e-12;5!DOID:3910;1.20e-08;2!DOID:114;2.48e-08;2!DOID:3193;2.48e-08;2!DOID:962;2.48e-08;2!DOID:3905;2.08e-07;9!DOID:1115;5.45e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.38e-15,1;DOID:326,2.38e-15,1;DOID:3978,2.38e-15,1;DOID:3394,2.38e-15,1;DOID:5844,2.38e-15,1;DOID:3908,1.26e-12,5;DOID:3910,1.20e-08,2;DOID:114,2.48e-08,2;DOID:3193,2.67e-08,2;DOID:962,2.67e-08,2;DOID:3905,2.08e-07,9;DOID:1115,5.56e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.16e-17!82;UBERON:0000955!1.05e-16!69;UBERON:0006238!1.05e-16!69;UBERON:0005743!5.93e-16!86;UBERON:0002780!1.08e-15!41;UBERON:0001890!1.08e-15!41;UBERON:0006240!1.08e-15!41;UBERON:0001049!1.82e-15!57;UBERON:0005068!1.82e-15!57;UBERON:0006241!1.82e-15!57;UBERON:0007135!1.82e-15!57;UBERON:0003080!3.30e-15!42;UBERON:0000073!5.35e-15!94;UBERON:0001016!5.35e-15!94;UBERON:0001893!1.47e-13!34;UBERON:0002616!3.28e-13!59;UBERON:0001869!6.97e-13!32;UBERON:0002791!2.19e-12!33;UBERON:0002020!5.48e-12!34;UBERON:0003528!5.48e-12!34;UBERON:0000033!3.58e-11!123;UBERON:0000153!2.78e-10!129;UBERON:0007811!2.78e-10!129;UBERON:0003075!3.48e-10!86;UBERON:0007284!3.48e-10!86;UBERON:0003056!3.72e-10!61;UBERON:0004121!1.78e-09!169;UBERON:0002346!1.84e-09!90;UBERON:0000924!4.73e-09!173;UBERON:0006601!4.73e-09!173;UBERON:0000476!1.23e-08!3;UBERON:0000920!1.23e-08!3;UBERON:0002308!2.14e-08!9;UBERON:0000125!2.14e-08!9;UBERON:0009663!7.36e-08!7;UBERON:0007023!5.20e-07!115;UBERON:0001950!9.77e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.37e-20;3!UBERON:0000920;5.37e-20;3!UBERON:0005631;1.82e-13;10!UBERON:0000158;1.82e-13;10!UBERON:0004903;1.20e-08;2!UBERON:0002173;1.20e-08;2!UBERON:0002186;1.20e-08;2!UBERON:0003714;2.48e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.88e-20,3;UBERON:0005631,8.44e-10,14;UBERON:0000158,8.44e-10,14;UBERON:0003124,3.88e-09,7;UBERON:0004903,1.20e-08,2;UBERON:0002173,1.20e-08,2;UBERON:0002186,1.20e-08,2;UBERON:0003714,2.67e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,0.907604499126468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0,2.86493381685228,0,0,0,0,0,0,0,0,0,0.251932747854276,0.511343412510774,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,25.6796186795694,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0.46112780877612,1.07709173291727,1.84700532267414,10.8460394308853,0.366390373607449,1.5991043280559,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,8.1174646483826,0,0,0,0,0,0,0,0,0.293977192243133,0.609414446062818,0,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0.101998217636322,1.73370353940911,0.600420288709789,0.136905378891993,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,9.08162894066896,0,0,0,0,0,0,0,0,0,0,5.79319274070434,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11728983594649,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.345786262321089,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0.795664888465099,0,3.63069123666336,0,0.261906694481422,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.203977659483963,0,0.275684698604535,0.250707539292375,0,0.267964130156178,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.488419611665847,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:4833949..4833955,+ | |||
}} |
Revision as of 01:30, 14 September 2013
Short description: | p@chr7:4833949..4833955, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:4833949..4833955, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.88e-20 | 3 |
germ line cell | 5.82e-09 | 7 |
germ cell | 5.82e-09 | 7 |
extraembryonic cell | 2.32e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.88e-20 | 3 |
extraembryonic membrane | 8.44e-10 | 14 |
membranous layer | 8.44e-10 | 14 |
chorion | 3.88e-09 | 7 |
bronchoalveolar duct junction | 1.20e-08 | 2 |
alveolar duct | 1.20e-08 | 2 |
bronchiole | 1.20e-08 | 2 |
neural tissue | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.38e-15 | 1 |
ischemia | 2.38e-15 | 1 |
extrinsic cardiomyopathy | 2.38e-15 | 1 |
myocardial ischemia | 2.38e-15 | 1 |
myocardial infarction | 2.38e-15 | 1 |
non-small cell lung carcinoma | 1.26e-12 | 5 |
lung adenocarcinoma | 1.20e-08 | 2 |
heart disease | 2.48e-08 | 2 |
peripheral nerve sheath neoplasm | 2.67e-08 | 2 |
neurofibroma | 2.67e-08 | 2 |
lung carcinoma | 2.08e-07 | 9 |
sarcoma | 5.56e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.