FFCP PHASE1:Mm9::chr3:68673485..68673511,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68725|HGNC=|MCL_coexpression_id=3414|UniProt=E9Q0B3|association_with_transcript=0bp_to_ENSMUST00000054551,NM_001167996,uc012cqj.1_5end|description=CAGE_peak_2_at_1110032F04Rik_5end|id=chr3:68673485..68673511,+|ontology_enrichment_celltype=CL:0000624!1.30e-07!8|ontology_enrichment_celltype_v019_2=CL:0000624,1.37e-22,8;CL:0000893,2.78e-22,6;CL:0002489,2.78e-22,6;CL:0000898,2.78e-22,6;CL:0000809,2.78e-22,6;CL:0000810,2.78e-22,6;CL:0000895,2.78e-22,6;CL:0000808,2.78e-22,6;CL:0000894,2.78e-22,6;CL:0000806,2.78e-22,6;CL:0000807,2.78e-22,6;CL:0000805,2.78e-22,6;CL:0002425,2.78e-22,6;CL:0002436,2.78e-22,6;CL:0002427,2.78e-22,6;CL:0002428,2.78e-22,6;CL:0002429,2.78e-22,6;CL:0002433,2.78e-22,6;CL:0002431,2.78e-22,6;CL:0002432,2.78e-22,6;CL:0000791,5.52e-20,9;CL:0000789,5.52e-20,9;CL:0002420,5.52e-20,9;CL:0002419,5.52e-20,9;CL:0000790,5.52e-20,9;CL:0000084,3.42e-16,11;CL:0000827,3.42e-16,11;CL:0000838,9.07e-15,12;CL:0000542,1.45e-13,13;CL:0000051,1.45e-13,13;CL:0000738,3.70e-10,17;CL:0002087,3.70e-10,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!2.14e-12!86;UBERON:0000153!6.60e-12!94;UBERON:0001049!4.84e-11!52;UBERON:0005068!4.84e-11!52;UBERON:0006241!4.84e-11!52;UBERON:0007135!4.84e-11!52;UBERON:0002020!1.67e-10!34;UBERON:0000955!6.52e-10!50;UBERON:0006238!6.52e-10!50;UBERON:0002616!1.26e-09!49;UBERON:0003080!5.05e-09!40;UBERON:0001017!5.50e-09!73;UBERON:0005743!5.50e-09!73;UBERON:0002780!1.25e-08!39;UBERON:0001890!1.25e-08!39;UBERON:0006240!1.25e-08!39;UBERON:0000033!1.58e-08!63;UBERON:0000073!2.66e-08!75;UBERON:0001016!2.66e-08!75;UBERON:0002791!2.66e-08!29;UBERON:0003528!2.66e-08!29;UBERON:0001893!2.66e-08!29;UBERON:0002021!4.17e-08!10;UBERON:0000411!4.17e-08!10;UBERON:0001950!4.17e-08!10;UBERON:0003056!2.50e-07!49;UBERON:0002346!2.67e-07!71;UBERON:0003075!2.67e-07!71;UBERON:0007284!2.67e-07!71;UBERON:0000956!5.90e-07!21;UBERON:0001869!5.90e-07!21;UBERON:0000203!5.90e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.85e-13,10;UBERON:0000411,5.85e-13,10;UBERON:0001950,5.85e-13,10;UBERON:0000956,5.87e-10,21;UBERON:0001869,5.87e-10,21;UBERON:0000203,5.87e-10,21;UBERON:0002619,9.47e-10,17;UBERON:0003528,1.18e-08,29;UBERON:0002791,1.18e-08,29;UBERON:0001893,1.18e-08,29;UBERON:0002020,3.56e-07,34;UBERON:0002370,4.78e-07,23;UBERON:0000974,4.78e-07,23;UBERON:0004807,4.78e-07,23;UBERON:0005058,4.78e-07,23;UBERON:0003351,4.78e-07,23;UBERON:0009113,4.78e-07,23;UBERON:0003295,4.78e-07,23;UBERON:0009722,4.78e-07,23;UBERON:0005562,4.78e-07,23;UBERON:0007690,4.78e-07,23|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,5.55230290798778,1.68946466582,1.87251621057595,8.90333434772626,9.89174771542172,1.36960583944965,1.74840804837995,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0.395658863190582,0,0.52091337055676,0,1.12552522006336,0.61119299110724,0.883885756421003,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,1.21677024134594,1.53429274398198,0.41557608911912,0.162241263067758,0.305518091550949,0.248813941220186,1.26361379216837,0,0.130120442962704,0,0,0,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,1.44049649168812,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,1.05144974282064,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,2.25415471346161,0.610953983535943,1.55161989734101,0.701358198903186,0.885311519739602,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0.712262414669021,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0.532020700926821,0,0.658196082408484,0.608929898229199,0,0,0.441056796109924,0,0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| ||
|EntrezGene=68725 | |||
|HGNC= | |||
|MCL_coexpression_id=3414 | |||
|UniProt=E9Q0B3 | |||
|association_with_transcript=0bp_to_ENSMUST00000054551,NM_001167996,uc012cqj.1_5end | |||
|description=CAGE_peak_2_at_1110032F04Rik_5end | |||
|id=chr3:68673485..68673511,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.30e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.37e-22,8;CL:0000893,2.78e-22,6;CL:0002489,2.78e-22,6;CL:0000898,2.78e-22,6;CL:0000809,2.78e-22,6;CL:0000810,2.78e-22,6;CL:0000895,2.78e-22,6;CL:0000808,2.78e-22,6;CL:0000894,2.78e-22,6;CL:0000806,2.78e-22,6;CL:0000807,2.78e-22,6;CL:0000805,2.78e-22,6;CL:0002425,2.78e-22,6;CL:0002436,2.78e-22,6;CL:0002427,2.78e-22,6;CL:0002428,2.78e-22,6;CL:0002429,2.78e-22,6;CL:0002433,2.78e-22,6;CL:0002431,2.78e-22,6;CL:0002432,2.78e-22,6;CL:0000791,5.52e-20,9;CL:0000789,5.52e-20,9;CL:0002420,5.52e-20,9;CL:0002419,5.52e-20,9;CL:0000790,5.52e-20,9;CL:0000084,3.42e-16,11;CL:0000827,3.42e-16,11;CL:0000838,9.07e-15,12;CL:0000542,1.45e-13,13;CL:0000051,1.45e-13,13;CL:0000738,3.70e-10,17;CL:0002087,3.70e-10,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.14e-12!86;UBERON:0000153!6.60e-12!94;UBERON:0001049!4.84e-11!52;UBERON:0005068!4.84e-11!52;UBERON:0006241!4.84e-11!52;UBERON:0007135!4.84e-11!52;UBERON:0002020!1.67e-10!34;UBERON:0000955!6.52e-10!50;UBERON:0006238!6.52e-10!50;UBERON:0002616!1.26e-09!49;UBERON:0003080!5.05e-09!40;UBERON:0001017!5.50e-09!73;UBERON:0005743!5.50e-09!73;UBERON:0002780!1.25e-08!39;UBERON:0001890!1.25e-08!39;UBERON:0006240!1.25e-08!39;UBERON:0000033!1.58e-08!63;UBERON:0000073!2.66e-08!75;UBERON:0001016!2.66e-08!75;UBERON:0002791!2.66e-08!29;UBERON:0003528!2.66e-08!29;UBERON:0001893!2.66e-08!29;UBERON:0002021!4.17e-08!10;UBERON:0000411!4.17e-08!10;UBERON:0001950!4.17e-08!10;UBERON:0003056!2.50e-07!49;UBERON:0002346!2.67e-07!71;UBERON:0003075!2.67e-07!71;UBERON:0007284!2.67e-07!71;UBERON:0000956!5.90e-07!21;UBERON:0001869!5.90e-07!21;UBERON:0000203!5.90e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.85e-13,10;UBERON:0000411,5.85e-13,10;UBERON:0001950,5.85e-13,10;UBERON:0000956,5.87e-10,21;UBERON:0001869,5.87e-10,21;UBERON:0000203,5.87e-10,21;UBERON:0002619,9.47e-10,17;UBERON:0003528,1.18e-08,29;UBERON:0002791,1.18e-08,29;UBERON:0001893,1.18e-08,29;UBERON:0002020,3.56e-07,34;UBERON:0002370,4.78e-07,23;UBERON:0000974,4.78e-07,23;UBERON:0004807,4.78e-07,23;UBERON:0005058,4.78e-07,23;UBERON:0003351,4.78e-07,23;UBERON:0009113,4.78e-07,23;UBERON:0003295,4.78e-07,23;UBERON:0009722,4.78e-07,23;UBERON:0005562,4.78e-07,23;UBERON:0007690,4.78e-07,23 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.16787927191189,0.233612640595526,5.55230290798778,1.68946466582,1.87251621057595,8.90333434772626,9.89174771542172,1.36960583944965,1.74840804837995,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,0,0,0,0,0,0.725362142011344,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.255374676170375,0.614426133024974,0.395658863190582,0,0.52091337055676,0,1.12552522006336,0.61119299110724,0.883885756421003,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.376963056338593,1.21677024134594,1.53429274398198,0.41557608911912,0.162241263067758,0.305518091550949,0.248813941220186,1.26361379216837,0,0.130120442962704,0,0,0,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.703578179943289,1.44049649168812,0.946978942340841,0.196764231747404,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,1.05144974282064,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.758671603812327,0.228497025219458,2.25415471346161,0.610953983535943,1.55161989734101,0.701358198903186,0.885311519739602,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0,0,0.283076530788832,0,0,0.395287777946524,0.321321316421807,0.425820255624806,0.712262414669021,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0.214337035031592,0.532020700926821,0,0.658196082408484,0.608929898229199,0,0,0.441056796109924,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0,0.209088296014469,0,0,0.0826534557253359,0,0,0,0,0.448549638131936,0.66183396182839,0.777804753376191,0.904118764344118,1.01373675294467,0.469428954583016,0.2604087696879,0,0,0,0,1.01362607645082,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0.360586348559907,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,1.38097570952153,1.14579102687879,0.515559547031063,2.74033007908257,0.755393897389701,0.675022500231806,2.2516060161211,2.26571204492102,2.5888015587591,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0.338458431566706,0,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p2@1110032F04Rik | |||
}} |
Revision as of 02:29, 14 September 2013
Short description: | p2@1110032F04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1110032F04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3414 |
Association with transcript: | 0bp_to_ENSMUST00000054551, NM_001167996, uc012cqj.1_5end |
EntrezGene: | 1110032F04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.85e-13 | 10 |
visual cortex | 5.85e-13 | 10 |
neocortex | 5.85e-13 | 10 |
cerebral cortex | 5.87e-10 | 21 |
cerebral hemisphere | 5.87e-10 | 21 |
pallium | 5.87e-10 | 21 |
regional part of cerebral cortex | 9.47e-10 | 17 |
brain grey matter | 1.18e-08 | 29 |
regional part of telencephalon | 1.18e-08 | 29 |
telencephalon | 1.18e-08 | 29 |
gray matter | 3.56e-07 | 34 |
thymus | 4.78e-07 | 23 |
neck | 4.78e-07 | 23 |
respiratory system epithelium | 4.78e-07 | 23 |
hemolymphoid system gland | 4.78e-07 | 23 |
pharyngeal epithelium | 4.78e-07 | 23 |
thymic region | 4.78e-07 | 23 |
pharyngeal gland | 4.78e-07 | 23 |
entire pharyngeal arch endoderm | 4.78e-07 | 23 |
thymus primordium | 4.78e-07 | 23 |
early pharyngeal endoderm | 4.78e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.