FFCP PHASE1:Mm9::chr3:88991792..88991818,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68521|HGNC=|MCL_coexpression_id=40|UniProt=|association_with_transcript=-37bp_to_ENSMUST00000125501_5end|description=CAGE_peak_6_at_Fam189b_5end|id=chr3:88991792..88991818,+|ontology_enrichment_celltype=CL:0000838!1.09e-19!12;CL:0000084!2.07e-18!11;CL:0000827!2.07e-18!11;CL:0000542!6.39e-18!13;CL:0000051!6.39e-18!13;CL:0000791!3.75e-15!9;CL:0000789!3.75e-15!9;CL:0002420!3.75e-15!9;CL:0002419!3.75e-15!9;CL:0000790!3.75e-15!9;CL:0000624!2.09e-13!8;CL:0002031!4.85e-13!25;CL:0000738!6.05e-13!17;CL:0002087!6.05e-13!17;CL:0000988!1.67e-10!32;CL:0002032!1.67e-10!32;CL:0000037!1.67e-10!32;CL:0000566!1.67e-10!32;CL:0000837!1.67e-10!32;CL:0000893!6.35e-10!6;CL:0002489!6.35e-10!6;CL:0000898!6.35e-10!6;CL:0000809!6.35e-10!6;CL:0000810!6.35e-10!6;CL:0000895!6.35e-10!6;CL:0000808!6.35e-10!6;CL:0000894!6.35e-10!6;CL:0000806!6.35e-10!6;CL:0000807!6.35e-10!6;CL:0000805!6.35e-10!6;CL:0002425!6.35e-10!6;CL:0002436!6.35e-10!6;CL:0002427!6.35e-10!6;CL:0002428!6.35e-10!6;CL:0002429!6.35e-10!6;CL:0002433!6.35e-10!6;CL:0002431!6.35e-10!6;CL:0002432!6.35e-10!6|ontology_enrichment_celltype_v019_2=CL:0000084,1.64e-26,11;CL:0000827,1.64e-26,11;CL:0000838,2.66e-24,12;CL:0000791,6.05e-23,9;CL:0000789,6.05e-23,9;CL:0002420,6.05e-23,9;CL:0002419,6.05e-23,9;CL:0000790,6.05e-23,9;CL:0000542,1.98e-22,13;CL:0000051,1.98e-22,13;CL:0002031,4.54e-20,25;CL:0000738,3.89e-17,17;CL:0002087,3.89e-17,17;CL:0000624,7.30e-17,8;CL:0000988,1.38e-15,32;CL:0002032,1.38e-15,32;CL:0000037,1.38e-15,32;CL:0000837,1.38e-15,32;CL:0002320,1.08e-10,46;CL:0000134,1.08e-10,46;CL:0000815,1.19e-09,1;CL:0000792,1.19e-09,1;CL:0000625,1.73e-09,1;CL:0000219,5.04e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.67e-31!29;UBERON:0002370!9.51e-26!23;UBERON:0000974!9.51e-26!23;UBERON:0004807!9.51e-26!23;UBERON:0005058!9.51e-26!23;UBERON:0003351!9.51e-26!23;UBERON:0009113!9.51e-26!23;UBERON:0003295!9.51e-26!23;UBERON:0009722!9.51e-26!23;UBERON:0005562!9.51e-26!23;UBERON:0007690!9.51e-26!23;UBERON:0002193!1.10e-25!48;UBERON:0006562!1.97e-24!24;UBERON:0003408!1.97e-24!24;UBERON:0001557!1.97e-24!24;UBERON:0001042!1.97e-24!24;UBERON:0008814!1.97e-24!24;UBERON:0009145!1.97e-24!24;UBERON:0002390!1.29e-23!45;UBERON:0003061!1.29e-23!45;UBERON:0000072!4.54e-21!27;UBERON:0000065!1.43e-17!41;UBERON:0001004!5.42e-17!42;UBERON:0005057!3.60e-16!51;UBERON:0002405!3.89e-16!70;UBERON:0000063!5.96e-15!35;UBERON:0003081!3.97e-10!88;UBERON:0005911!1.04e-08!69;UBERON:0001041!1.09e-08!92;UBERON:0000077!1.31e-08!97;UBERON:0003929!1.76e-08!55;UBERON:0002368!3.72e-08!60;UBERON:0000064!3.11e-07!99;UBERON:0001007!3.58e-07!128;UBERON:0001555!3.58e-07!128;UBERON:0007026!3.58e-07!128;UBERON:0002530!4.14e-07!65;UBERON:0004119!6.20e-07!130;UBERON:0000925!6.20e-07!130;UBERON:0006595!6.20e-07!130;UBERON:0002106!7.67e-07!6;UBERON:0004457!7.67e-07!6;UBERON:0000042!7.67e-07!6;UBERON:0004854!7.67e-07!6;UBERON:0009034!7.67e-07!6;UBERON:0002095!7.67e-07!6;UBERON:0004782!7.67e-07!6;UBERON:0003281!7.67e-07!6;UBERON:0009664!7.67e-07!6;UBERON:0002296!7.67e-07!6;UBERON:0005602!7.67e-07!6;UBERON:0001179!7.67e-07!6;UBERON:0006293!7.67e-07!6;UBERON:0004921!9.98e-07!126;UBERON:0004185!9.98e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.08e-10,46;UBERON:0000029,3.04e-09,1;UBERON:0001097,3.04e-09,1;UBERON:0003968,3.04e-09,1;UBERON:0001467,3.04e-09,1;UBERON:0002193,9.01e-08,48;UBERON:0002405,9.01e-08,48|phase1_expression=0,0,0,0,0,0,0,10.3298658753261,0.140788722151667,0.468129052643987,0.34243593645101,0.319088635981346,9.41604014621631,12.5011175459166,0,0,0,1.10411757875383,0.822686601634433,1.27316895539409,0.255129870453209,0.893618560807968,1.30599894569468,0.47997726838022,0,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.683483523191411,0.412773735926445,0.185194527369712,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.410843828659309,0.389762468933385,0.179026695667481,0.993406773906324,0.721172697119813,0.886137163047463,0.807731599585181,0.685861259894999,0.403304740547362,0.38983152295901,0.962118416403295,1.40252282617883,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Fam189b}} | ||
|EntrezGene=68521 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_ENSMUST00000125501_5end | |||
|description=CAGE_peak_6_at_Fam189b_5end | |||
|id=chr3:88991792..88991818,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.09e-19!12;CL:0000084!2.07e-18!11;CL:0000827!2.07e-18!11;CL:0000542!6.39e-18!13;CL:0000051!6.39e-18!13;CL:0000791!3.75e-15!9;CL:0000789!3.75e-15!9;CL:0002420!3.75e-15!9;CL:0002419!3.75e-15!9;CL:0000790!3.75e-15!9;CL:0000624!2.09e-13!8;CL:0002031!4.85e-13!25;CL:0000738!6.05e-13!17;CL:0002087!6.05e-13!17;CL:0000988!1.67e-10!32;CL:0002032!1.67e-10!32;CL:0000037!1.67e-10!32;CL:0000566!1.67e-10!32;CL:0000837!1.67e-10!32;CL:0000893!6.35e-10!6;CL:0002489!6.35e-10!6;CL:0000898!6.35e-10!6;CL:0000809!6.35e-10!6;CL:0000810!6.35e-10!6;CL:0000895!6.35e-10!6;CL:0000808!6.35e-10!6;CL:0000894!6.35e-10!6;CL:0000806!6.35e-10!6;CL:0000807!6.35e-10!6;CL:0000805!6.35e-10!6;CL:0002425!6.35e-10!6;CL:0002436!6.35e-10!6;CL:0002427!6.35e-10!6;CL:0002428!6.35e-10!6;CL:0002429!6.35e-10!6;CL:0002433!6.35e-10!6;CL:0002431!6.35e-10!6;CL:0002432!6.35e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.64e-26,11;CL:0000827,1.64e-26,11;CL:0000838,2.66e-24,12;CL:0000791,6.05e-23,9;CL:0000789,6.05e-23,9;CL:0002420,6.05e-23,9;CL:0002419,6.05e-23,9;CL:0000790,6.05e-23,9;CL:0000542,1.98e-22,13;CL:0000051,1.98e-22,13;CL:0002031,4.54e-20,25;CL:0000738,3.89e-17,17;CL:0002087,3.89e-17,17;CL:0000624,7.30e-17,8;CL:0000988,1.38e-15,32;CL:0002032,1.38e-15,32;CL:0000037,1.38e-15,32;CL:0000837,1.38e-15,32;CL:0002320,1.08e-10,46;CL:0000134,1.08e-10,46;CL:0000815,1.19e-09,1;CL:0000792,1.19e-09,1;CL:0000625,1.73e-09,1;CL:0000219,5.04e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.67e-31!29;UBERON:0002370!9.51e-26!23;UBERON:0000974!9.51e-26!23;UBERON:0004807!9.51e-26!23;UBERON:0005058!9.51e-26!23;UBERON:0003351!9.51e-26!23;UBERON:0009113!9.51e-26!23;UBERON:0003295!9.51e-26!23;UBERON:0009722!9.51e-26!23;UBERON:0005562!9.51e-26!23;UBERON:0007690!9.51e-26!23;UBERON:0002193!1.10e-25!48;UBERON:0006562!1.97e-24!24;UBERON:0003408!1.97e-24!24;UBERON:0001557!1.97e-24!24;UBERON:0001042!1.97e-24!24;UBERON:0008814!1.97e-24!24;UBERON:0009145!1.97e-24!24;UBERON:0002390!1.29e-23!45;UBERON:0003061!1.29e-23!45;UBERON:0000072!4.54e-21!27;UBERON:0000065!1.43e-17!41;UBERON:0001004!5.42e-17!42;UBERON:0005057!3.60e-16!51;UBERON:0002405!3.89e-16!70;UBERON:0000063!5.96e-15!35;UBERON:0003081!3.97e-10!88;UBERON:0005911!1.04e-08!69;UBERON:0001041!1.09e-08!92;UBERON:0000077!1.31e-08!97;UBERON:0003929!1.76e-08!55;UBERON:0002368!3.72e-08!60;UBERON:0000064!3.11e-07!99;UBERON:0001007!3.58e-07!128;UBERON:0001555!3.58e-07!128;UBERON:0007026!3.58e-07!128;UBERON:0002530!4.14e-07!65;UBERON:0004119!6.20e-07!130;UBERON:0000925!6.20e-07!130;UBERON:0006595!6.20e-07!130;UBERON:0002106!7.67e-07!6;UBERON:0004457!7.67e-07!6;UBERON:0000042!7.67e-07!6;UBERON:0004854!7.67e-07!6;UBERON:0009034!7.67e-07!6;UBERON:0002095!7.67e-07!6;UBERON:0004782!7.67e-07!6;UBERON:0003281!7.67e-07!6;UBERON:0009664!7.67e-07!6;UBERON:0002296!7.67e-07!6;UBERON:0005602!7.67e-07!6;UBERON:0001179!7.67e-07!6;UBERON:0006293!7.67e-07!6;UBERON:0004921!9.98e-07!126;UBERON:0004185!9.98e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.08e-10,46;UBERON:0000029,3.04e-09,1;UBERON:0001097,3.04e-09,1;UBERON:0003968,3.04e-09,1;UBERON:0001467,3.04e-09,1;UBERON:0002193,9.01e-08,48;UBERON:0002405,9.01e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,10.3298658753261,0.140788722151667,0.468129052643987,0.34243593645101,0.319088635981346,9.41604014621631,12.5011175459166,0,0,0,1.10411757875383,0.822686601634433,1.27316895539409,0.255129870453209,0.893618560807968,1.30599894569468,0.47997726838022,0,0,0,0,0.570070258369122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,2.90144856804538,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.683483523191411,0.412773735926445,0.185194527369712,0,0.546776910884101,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.410843828659309,0.389762468933385,0.179026695667481,0.993406773906324,0.721172697119813,0.886137163047463,0.807731599585181,0.685861259894999,0.403304740547362,0.38983152295901,0.962118416403295,1.40252282617883,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Fam189b | |||
}} |
Revision as of 02:49, 14 September 2013
Short description: | p6@Fam189b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fam189b_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | -37bp_to_ENSMUST00000125501_5end |
EntrezGene: | Fam189b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.64e-26 | 11 |
pro-T cell | 1.64e-26 | 11 |
lymphoid lineage restricted progenitor cell | 2.66e-24 | 12 |
mature alpha-beta T cell | 6.05e-23 | 9 |
alpha-beta T cell | 6.05e-23 | 9 |
immature T cell | 6.05e-23 | 9 |
mature T cell | 6.05e-23 | 9 |
immature alpha-beta T cell | 6.05e-23 | 9 |
lymphocyte | 1.98e-22 | 13 |
common lymphoid progenitor | 1.98e-22 | 13 |
hematopoietic lineage restricted progenitor cell | 4.54e-20 | 25 |
leukocyte | 3.89e-17 | 17 |
nongranular leukocyte | 3.89e-17 | 17 |
CD4-positive, alpha-beta T cell | 7.30e-17 | 8 |
hematopoietic cell | 1.38e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.38e-15 | 32 |
hematopoietic stem cell | 1.38e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.38e-15 | 32 |
connective tissue cell | 1.08e-10 | 46 |
mesenchymal cell | 1.08e-10 | 46 |
regulatory T cell | 1.19e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.19e-09 | 1 |
CD8-positive, alpha-beta T cell | 1.73e-09 | 1 |
motile cell | 5.04e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.08e-10 | 46 |
lymph node | 3.04e-09 | 1 |
axillary lymph node | 3.04e-09 | 1 |
peripheral lymph node | 3.04e-09 | 1 |
shoulder | 3.04e-09 | 1 |
hemolymphoid system | 9.01e-08 | 48 |
immune system | 9.01e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.