FFCP PHASE1:Hg19::chr8:19540266..19540277,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24290|TSSclassifier=W|UniProt=Q8TDX6|association_with_transcript=0bp_to_ENST00000311540,ENST00000397998_5end|coexpression_cluster_id=C20|description=CAGE_peak_16_at_CSGALNACT1_5end|id=chr8:19540266..19540277,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002541;1.67e-09;3!CL:0000775;1.67e-09;3|ontology_enrichment_celltype_v019_2=CL:0000775,1.54e-09,3;CL:0002541,1.81e-09,3|ontology_enrichment_development_v019=UBERON:0010226;3.15e-26;1!UBERON:0010227;5.23e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4|ontology_enrichment_disease_v019_2=DOID:114,9.40e-14,2;DOID:1287,1.59e-07,4|ontology_enrichment_uberon=UBERON:0007100!1.90e-16!27;UBERON:0000948!3.46e-11!24;UBERON:0005498!3.46e-11!24;UBERON:0004140!3.46e-11!24;UBERON:0009881!3.46e-11!24;UBERON:0004141!3.46e-11!24;UBERON:0003084!3.46e-11!24;UBERON:0007005!3.46e-11!24;UBERON:0004139!3.46e-11!24;UBERON:0004291!3.46e-11!24;UBERON:0004151!2.05e-09!3;UBERON:0003978!2.23e-09!3;UBERON:0009751!2.23e-09!3;UBERON:0000946!2.23e-09!3;UBERON:0002523!2.23e-09!3;UBERON:0005983!2.23e-09!3;UBERON:0002165!2.23e-09!3;UBERON:0002062!2.23e-09!3;UBERON:0007280!2.23e-09!3;UBERON:0004872!2.31e-09!84;UBERON:0001009!4.48e-08!113;UBERON:0002081!9.47e-07!2|ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-35;25!UBERON:0004151;5.51e-34;3!UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002084;3.15e-26;1!UBERON:0002146;3.15e-26;1!UBERON:0002082;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002079;5.23e-26;1!UBERON:0002135;9.79e-26;1!UBERON:0000948;1.78e-18;22!UBERON:0002081;1.00e-13;2!UBERON:0002133;1.37e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.51e-34,3;UBERON:0003978,9.10e-34,3;UBERON:0009751,9.10e-34,3;UBERON:0000946,9.10e-34,3;UBERON:0002523,9.10e-34,3;UBERON:0005983,9.10e-34,3;UBERON:0002165,9.10e-34,3;UBERON:0002062,9.10e-34,3;UBERON:0007280,9.10e-34,3;UBERON:0007100,4.19e-33,27;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002079,5.93e-26,1;UBERON:0002135,9.79e-26,1;UBERON:0000948,5.68e-17,24;UBERON:0005498,5.68e-17,24;UBERON:0004140,5.68e-17,24;UBERON:0009881,5.68e-17,24;UBERON:0004141,5.68e-17,24;UBERON:0003084,5.68e-17,24;UBERON:0007005,5.68e-17,24;UBERON:0004139,5.68e-17,24;UBERON:0004291,5.68e-17,24;UBERON:0004797,4.07e-15,7;UBERON:0002081,1.07e-13,2;UBERON:0010227,1.07e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0003103,2.81e-13,68;UBERON:0010313,6.94e-11,10;UBERON:0002342,6.94e-11,10;UBERON:0005062,6.94e-11,10;UBERON:0000920,1.81e-09,3;UBERON:0001009,4.38e-08,112;UBERON:0007023,6.07e-08,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0.924100740528266,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0.359030577639089,0.434589487688032,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0.864328787928898,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24290 | |||
|TSSclassifier=W | |||
|UniProt=Q8TDX6 | |||
|association_with_transcript=0bp_to_ENST00000311540,ENST00000397998_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_16_at_CSGALNACT1_5end | |||
|id=chr8:19540266..19540277,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.67e-09;3!CL:0000775;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.54e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.15e-26;1!UBERON:0010227;5.23e-26;1!UBERON:0005062;1.18e-25;4!UBERON:0007284;1.18e-25;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.00e-13;2!DOID:1287;1.64e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.40e-14,2;DOID:1287,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.90e-16!27;UBERON:0000948!3.46e-11!24;UBERON:0005498!3.46e-11!24;UBERON:0004140!3.46e-11!24;UBERON:0009881!3.46e-11!24;UBERON:0004141!3.46e-11!24;UBERON:0003084!3.46e-11!24;UBERON:0007005!3.46e-11!24;UBERON:0004139!3.46e-11!24;UBERON:0004291!3.46e-11!24;UBERON:0004151!2.05e-09!3;UBERON:0003978!2.23e-09!3;UBERON:0009751!2.23e-09!3;UBERON:0000946!2.23e-09!3;UBERON:0002523!2.23e-09!3;UBERON:0005983!2.23e-09!3;UBERON:0002165!2.23e-09!3;UBERON:0002062!2.23e-09!3;UBERON:0007280!2.23e-09!3;UBERON:0004872!2.31e-09!84;UBERON:0001009!4.48e-08!113;UBERON:0002081!9.47e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.00e-35;25!UBERON:0004151;5.51e-34;3!UBERON:0003978;8.37e-34;3!UBERON:0000946;8.37e-34;3!UBERON:0002084;3.15e-26;1!UBERON:0002146;3.15e-26;1!UBERON:0002082;3.15e-26;1!UBERON:0005623;3.15e-26;1!UBERON:0002079;5.23e-26;1!UBERON:0002135;9.79e-26;1!UBERON:0000948;1.78e-18;22!UBERON:0002081;1.00e-13;2!UBERON:0002133;1.37e-13;2!UBERON:0010313;6.77e-11;10!UBERON:0003124;1.67e-09;3!UBERON:0000920;1.67e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,5.51e-34,3;UBERON:0003978,9.10e-34,3;UBERON:0009751,9.10e-34,3;UBERON:0000946,9.10e-34,3;UBERON:0002523,9.10e-34,3;UBERON:0005983,9.10e-34,3;UBERON:0002165,9.10e-34,3;UBERON:0002062,9.10e-34,3;UBERON:0007280,9.10e-34,3;UBERON:0007100,4.19e-33,27;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002146,3.58e-26,1;UBERON:0005623,3.58e-26,1;UBERON:0002079,5.93e-26,1;UBERON:0002135,9.79e-26,1;UBERON:0000948,5.68e-17,24;UBERON:0005498,5.68e-17,24;UBERON:0004140,5.68e-17,24;UBERON:0009881,5.68e-17,24;UBERON:0004141,5.68e-17,24;UBERON:0003084,5.68e-17,24;UBERON:0007005,5.68e-17,24;UBERON:0004139,5.68e-17,24;UBERON:0004291,5.68e-17,24;UBERON:0004797,4.07e-15,7;UBERON:0002081,1.07e-13,2;UBERON:0010227,1.07e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0003103,2.81e-13,68;UBERON:0010313,6.94e-11,10;UBERON:0002342,6.94e-11,10;UBERON:0005062,6.94e-11,10;UBERON:0000920,1.81e-09,3;UBERON:0001009,4.38e-08,112;UBERON:0007023,6.07e-08,114 | |||
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|short_description=p16@CSGALNACT1 | |||
}} |
Revision as of 04:28, 14 September 2013
Short description: | p16@CSGALNACT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_CSGALNACT1_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000311540, ENST00000397998_5end |
EntrezGene: | CSGALNACT1 |
HGNC: | 24290 |
UniProt: | Q8TDX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.54e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 5.51e-34 | 3 |
valve | 9.10e-34 | 3 |
cardiac mesenchyme | 9.10e-34 | 3 |
cardial valve | 9.10e-34 | 3 |
tunica intima | 9.10e-34 | 3 |
heart layer | 9.10e-34 | 3 |
endocardium | 9.10e-34 | 3 |
endocardial cushion | 9.10e-34 | 3 |
presumptive endocardium | 9.10e-34 | 3 |
primary circulatory organ | 4.19e-33 | 27 |
heart left ventricle | 2.78e-26 | 1 |
cardiac ventricle | 2.78e-26 | 1 |
future cardiac ventricle | 2.78e-26 | 1 |
pulmonary valve | 3.58e-26 | 1 |
semi-lunar valve | 3.58e-26 | 1 |
left cardiac atrium | 5.93e-26 | 1 |
mitral valve | 9.79e-26 | 1 |
heart | 5.68e-17 | 24 |
primitive heart tube | 5.68e-17 | 24 |
primary heart field | 5.68e-17 | 24 |
anterior lateral plate mesoderm | 5.68e-17 | 24 |
heart tube | 5.68e-17 | 24 |
heart primordium | 5.68e-17 | 24 |
cardiac mesoderm | 5.68e-17 | 24 |
cardiogenic plate | 5.68e-17 | 24 |
heart rudiment | 5.68e-17 | 24 |
blood vessel layer | 4.07e-15 | 7 |
cardiac atrium | 1.07e-13 | 2 |
future cardiac atrium | 1.07e-13 | 2 |
atrioventricular valve | 1.37e-13 | 2 |
compound organ | 2.81e-13 | 68 |
neural crest-derived structure | 6.94e-11 | 10 |
neural crest | 6.94e-11 | 10 |
neural fold | 6.94e-11 | 10 |
egg chorion | 1.81e-09 | 3 |
circulatory system | 4.38e-08 | 112 |
adult organism | 6.07e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.40e-14 | 2 |
cardiovascular system disease | 1.59e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.