FFCP PHASE1:Mm9::chr5:130354909..130354965,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18682|HGNC=|MCL_coexpression_id=14|UniProt=P07934|association_with_transcript=0bp_to_ENSMUST00000026617,NM_011079,uc008ztm.1_5end|description=CAGE_peak_1_at_Phkg1_5end|id=chr5:130354909..130354965,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.45e-08,92;UBERON:0010371,2.44e-08,73;UBERON:0004121,2.50e-08,95;UBERON:0000924,2.50e-08,95;UBERON:0006601,2.50e-08,95;UBERON:0000073,3.14e-08,54;UBERON:0001049,2.11e-07,52;UBERON:0005068,2.11e-07,52;UBERON:0006241,2.11e-07,52;UBERON:0007135,2.11e-07,52;UBERON:0002021,2.86e-07,10;UBERON:0000411,2.86e-07,10;UBERON:0001950,2.86e-07,10;UBERON:0002346,5.10e-07,64;UBERON:0003075,5.10e-07,64;UBERON:0007284,5.10e-07,64|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.65192076945513,0,2.61630187656536,9.00713349211335,6.9994763666742,1.67983705950435,0,0,0,0,0,6.30373567865265,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,9.28760342607055,16.5213871288268,0,0,0,14.568200204594,16.7860091123226,0,0,0,7.70811166995721,15.3224805702225,16.8967186581868,0,0,0,15.6342479440773,12.9435400307286,13.5990440521361,7.95497180778903,8.54230084794618,0.186399445825301,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,87.9182070024767,1.02258193546835,0.519572009205738,0.35333957451034,0,5.13305909657271,5.09610479413291,0,0,0,0,13.7020655662872,1.8125651855302,0.742210695324124,0,0,0,0.150722640552623,1.64624189989987,2.38766523526383,0,12.8693427658721,47.7689698052932,38.338743437536,132.725752594697,108.127181449155,0,16.1029438356351,11.3101221679266,0.255457055208591,0,0,0,17.0761328921498,13.7250180845588,0.879580464790051,12.1677024134594,14.3200656104985,18.4931359658008,12.6548185192851,0,40.9298933307206,0.252722758433675,12.2056276414155,0,0,0.180062129805349,1.9591626318643,1.29269348387523,1.40925092313335,1.59292931751539,14.4873887613849,0,0,0,0,0,2.78601733217733,1.23469281844766,0,0,0,0,0.207125772535502,0,0.180062061461015,0.710234206755631,1.18058539048442,2.46827380619805,1.16266972375204,3.75582761959467,2.45207218971056,3.45575684818309,10.6708851651412,19.6186519100971,35.6727969317811,31.8347667172023,35.4304945527381,21.449574753541,0.92614151141356,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.69560190836683,0.738050739898011,1.56998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0.162135226775035,1.09824565275233,1.43768206527355,1.11642284300551,2.80833905803104,0,2.69096120282868,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.788175720530955,0,0.318909537314974,3.27726629431476,2.76295970985433,1.3018415272336,0,0,3.44234991113325,3.03530420935206,21.0321272884007,20.6292568402278,0.163934945376675,596.336330056729,0,0,0,0,0,0.283076530788832,0,0,0,9.63963949265421,2.2710413633323,0.35613120733451,0.81443479676788,1.64970122972535,0,0,0,0,0,0,0,0,7.12994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1.10264199027481,29.6795255294664,2.9063596805263,4.22190474497091,3.46179797609096,3.11867709515616,0,28.9263471136395,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.330613822901344,1.04702376793612,0.388844919875379,9.94142900939081,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,60.1982713078939,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,104.069246079382,0,0,0,1.9318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,10.7302850097243,14.7304075682297,12.0308057822273,12.2015759464018,13.7016503954128,15.107877947794,9.45031500324528,12.158672487054,10.8754178156209,9.83744592328458,0,0,0,0.729320151204882,0,1.2869045591501,6.66740183404846,5.76898160268904,8.66481865897901,7.58091635291392,5.83002389747551,5.47016390019621,7.95952813494,6.08238947846258,7.86865924691902,4.76293691283074,6.72129090480162,5.78727661391115,8.24171801606613,7.21274708658547,7.88599280486455,7.45398385869217,7.39152188836695,8.28474574804273,8.46984423737976,7.36147088657586,6.58540702341981,7.89209134313529,7.60503037536826,5.61142271657738,5.10130577933949,6.69830480153832,9.00308294973317,6.8172210121825,2.89359916471712,1.49886346762768,10.0590591631526,10.5286816483666,15.3030665655075,42.5741438900665,84.168024330213|short_description=p1@Phkg1}} | ||
|EntrezGene=18682 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|UniProt=P07934 | |||
|association_with_transcript=0bp_to_ENSMUST00000026617,NM_011079,uc008ztm.1_5end | |||
|description=CAGE_peak_1_at_Phkg1_5end | |||
|id=chr5:130354909..130354965,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.45e-08,92;UBERON:0010371,2.44e-08,73;UBERON:0004121,2.50e-08,95;UBERON:0000924,2.50e-08,95;UBERON:0006601,2.50e-08,95;UBERON:0000073,3.14e-08,54;UBERON:0001049,2.11e-07,52;UBERON:0005068,2.11e-07,52;UBERON:0006241,2.11e-07,52;UBERON:0007135,2.11e-07,52;UBERON:0002021,2.86e-07,10;UBERON:0000411,2.86e-07,10;UBERON:0001950,2.86e-07,10;UBERON:0002346,5.10e-07,64;UBERON:0003075,5.10e-07,64;UBERON:0007284,5.10e-07,64 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,1.65192076945513,0,2.61630187656536,9.00713349211335,6.9994763666742,1.67983705950435,0,0,0,0,0,6.30373567865265,2.57836046138721,0,0,0,0.338844532069132,0,0,0,0,9.28760342607055,16.5213871288268,0,0,0,14.568200204594,16.7860091123226,0,0,0,7.70811166995721,15.3224805702225,16.8967186581868,0,0,0,15.6342479440773,12.9435400307286,13.5990440521361,7.95497180778903,8.54230084794618,0.186399445825301,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,87.9182070024767,1.02258193546835,0.519572009205738,0.35333957451034,0,5.13305909657271,5.09610479413291,0,0,0,0,13.7020655662872,1.8125651855302,0.742210695324124,0,0,0,0.150722640552623,1.64624189989987,2.38766523526383,0,12.8693427658721,47.7689698052932,38.338743437536,132.725752594697,108.127181449155,0,16.1029438356351,11.3101221679266,0.255457055208591,0,0,0,17.0761328921498,13.7250180845588,0.879580464790051,12.1677024134594,14.3200656104985,18.4931359658008,12.6548185192851,0,40.9298933307206,0.252722758433675,12.2056276414155,0,0,0.180062129805349,1.9591626318643,1.29269348387523,1.40925092313335,1.59292931751539,14.4873887613849,0,0,0,0,0,2.78601733217733,1.23469281844766,0,0,0,0,0.207125772535502,0,0.180062061461015,0.710234206755631,1.18058539048442,2.46827380619805,1.16266972375204,3.75582761959467,2.45207218971056,3.45575684818309,10.6708851651412,19.6186519100971,35.6727969317811,31.8347667172023,35.4304945527381,21.449574753541,0.92614151141356,0,0,0,0,0,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.69560190836683,0.738050739898011,1.56998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0.162135226775035,1.09824565275233,1.43768206527355,1.11642284300551,2.80833905803104,0,2.69096120282868,0,1.47802552133284,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0,0.390267295715598,0.788175720530955,0,0.318909537314974,3.27726629431476,2.76295970985433,1.3018415272336,0,0,3.44234991113325,3.03530420935206,21.0321272884007,20.6292568402278,0.163934945376675,596.336330056729,0,0,0,0,0,0.283076530788832,0,0,0,9.63963949265421,2.2710413633323,0.35613120733451,0.81443479676788,1.64970122972535,0,0,0,0,0,0,0,0,7.12994756769443,0.632073515871632,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,1.10264199027481,29.6795255294664,2.9063596805263,4.22190474497091,3.46179797609096,3.11867709515616,0,28.9263471136395,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0,0,0,0.330613822901344,1.04702376793612,0.388844919875379,9.94142900939081,0,0,0,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0.241584120826006,60.1982713078939,0.316011120628178,0,0,0.129920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.443068581523732,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0,0.116876902181569,104.069246079382,0,0,0,1.9318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,10.7302850097243,14.7304075682297,12.0308057822273,12.2015759464018,13.7016503954128,15.107877947794,9.45031500324528,12.158672487054,10.8754178156209,9.83744592328458,0,0,0,0.729320151204882,0,1.2869045591501,6.66740183404846,5.76898160268904,8.66481865897901,7.58091635291392,5.83002389747551,5.47016390019621,7.95952813494,6.08238947846258,7.86865924691902,4.76293691283074,6.72129090480162,5.78727661391115,8.24171801606613,7.21274708658547,7.88599280486455,7.45398385869217,7.39152188836695,8.28474574804273,8.46984423737976,7.36147088657586,6.58540702341981,7.89209134313529,7.60503037536826,5.61142271657738,5.10130577933949,6.69830480153832,9.00308294973317,6.8172210121825,2.89359916471712,1.49886346762768,10.0590591631526,10.5286816483666,15.3030665655075,42.5741438900665,84.168024330213 | |||
|short_description=p1@Phkg1 | |||
}} |
Revision as of 06:32, 14 September 2013
Short description: | p1@Phkg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phkg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | 0bp_to_ENSMUST00000026617, NM_011079, uc008ztm.1_5end |
EntrezGene: | Phkg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.45e-08 | 92 |
ecto-epithelium | 2.44e-08 | 73 |
ectoderm-derived structure | 2.50e-08 | 95 |
ectoderm | 2.50e-08 | 95 |
presumptive ectoderm | 2.50e-08 | 95 |
regional part of nervous system | 3.14e-08 | 54 |
neural tube | 2.11e-07 | 52 |
neural rod | 2.11e-07 | 52 |
future spinal cord | 2.11e-07 | 52 |
neural keel | 2.11e-07 | 52 |
occipital lobe | 2.86e-07 | 10 |
visual cortex | 2.86e-07 | 10 |
neocortex | 2.86e-07 | 10 |
neurectoderm | 5.10e-07 | 64 |
neural plate | 5.10e-07 | 64 |
presumptive neural plate | 5.10e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.