FFCP PHASE1:Hg19::chr9:113431029..113431050,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4593|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7525|TSSclassifier=S|UniProt=Q5T0B5,Q5VZW9,O15146,F5H3K9,F5H6T2|association_with_transcript=0bp_to_ENST00000189978,ENST00000374440,ENST00000374441,ENST00000374447,ENST00000374448,ENST00000543335,ENST00000545907,NM_001166280,NM_001166281,NM_005592_5end|coexpression_cluster_id=C1107|description=CAGE_peak_2_at_MUSK_5end|id=chr9:113431029..113431050,+|ontology_enrichment_celltype=CL:0000188!8.04e-22!9;CL:0000515!1.80e-11!4;CL:0000680!1.32e-09!57;CL:0000056!1.32e-09!57;CL:0000355!1.32e-09!57;CL:0000594!8.12e-08!3|ontology_enrichment_celltype_v019=CL:0000056;8.39e-22;4!CL:0000188;1.43e-20;9!CL:0000680;4.46e-19;7!CL:0000515;3.24e-17;3|ontology_enrichment_celltype_v019_2=CL:0000515,8.88e-22,4;CL:0000188,1.11e-20,9;CL:0000680,2.29e-07,58;CL:0000056,2.29e-07,58;CL:0000355,2.29e-07,58|ontology_enrichment_development_v019=CL:0000515;8.39e-22;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.51e-16!115;UBERON:0002385!4.46e-15!63;UBERON:0001015!4.46e-15!63;UBERON:0000383!4.46e-15!63;UBERON:0001134!8.62e-13!61;UBERON:0002036!8.62e-13!61;UBERON:0003082!8.62e-13!61;UBERON:0004290!1.94e-10!70;UBERON:0000059!3.82e-10!11;UBERON:0001155!3.02e-09!9;UBERON:0007100!1.59e-08!27;UBERON:0000486!3.85e-08!82;UBERON:0003978!4.33e-08!3;UBERON:0009751!4.33e-08!3;UBERON:0000946!4.33e-08!3;UBERON:0002523!4.33e-08!3;UBERON:0005983!4.33e-08!3;UBERON:0002165!4.33e-08!3;UBERON:0002062!4.33e-08!3;UBERON:0007280!4.33e-08!3;UBERON:0000914!5.56e-08!83;UBERON:0002329!5.56e-08!83;UBERON:0003077!5.56e-08!83;UBERON:0003059!5.56e-08!83;UBERON:0007282!5.56e-08!83;UBERON:0009618!5.56e-08!83;UBERON:0007285!5.56e-08!83;UBERON:0000481!5.08e-07!347;UBERON:0003104!6.15e-07!238;UBERON:0009142!6.15e-07!238;UBERON:0000160!6.70e-07!27;UBERON:0003103!8.63e-07!69|ontology_enrichment_uberon_v019=UBERON:0001134;6.53e-46;16!UBERON:0002036;6.53e-46;16!UBERON:0002385;3.65e-22;31!UBERON:0001015;3.65e-22;31!UBERON:0000383;3.65e-22;31!UBERON:0000341;5.79e-11;2!UBERON:0002133;5.79e-11;2!UBERON:0003978;1.36e-07;3!UBERON:0004151;1.36e-07;3!UBERON:0000946;1.36e-07;3!UBERON:0003135;1.38e-07;11!UBERON:0001389;7.15e-07;1!UBERON:0000026;7.15e-07;1!UBERON:0008784;7.15e-07;1!UBERON:0006058;7.15e-07;1!UBERON:0003663;7.15e-07;1!UBERON:0004256;7.15e-07;1!UBERON:0004708;7.15e-07;1!UBERON:0002101;7.15e-07;1!UBERON:0004709;7.15e-07;1!UBERON:0002529;7.15e-07;1!UBERON:0010538;7.15e-07;1!UBERON:0003661;7.15e-07;1!UBERON:0010890;7.15e-07;1!UBERON:0002471;7.15e-07;1!UBERON:0001383;7.15e-07;1!UBERON:0010758;7.15e-07;1!UBERON:0010707;7.15e-07;1!UBERON:0000978;7.15e-07;1!UBERON:0002103;7.15e-07;1!UBERON:0001665;7.15e-07;1!UBERON:0003823;7.15e-07;1!UBERON:0000154;7.15e-07;1!UBERON:0010709;7.15e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.89e-12,62;UBERON:0002036,6.89e-12,62;UBERON:0003082,6.89e-12,62;UBERON:0002385,1.97e-11,64;UBERON:0001015,1.97e-11,64;UBERON:0000383,1.97e-11,64;UBERON:0000341,4.26e-11,2;UBERON:0002133,7.88e-11,2;UBERON:0007023,1.53e-10,114;UBERON:0002329,4.87e-10,71;UBERON:0003059,4.87e-10,71;UBERON:0007282,4.87e-10,71;UBERON:0004290,4.87e-10,71;UBERON:0009618,4.87e-10,71;UBERON:0003077,7.31e-10,72;UBERON:0007285,7.31e-10,72;UBERON:0007524,1.09e-09,73;UBERON:0007503,6.72e-09,78;UBERON:0000486,3.33e-08,83;UBERON:0004151,9.72e-08,3;UBERON:0003104,1.21e-07,160;UBERON:0009142,1.21e-07,160;UBERON:0003135,1.66e-07,11;UBERON:0003978,1.67e-07,3;UBERON:0009751,1.67e-07,3;UBERON:0000946,1.67e-07,3;UBERON:0002523,1.67e-07,3;UBERON:0005983,1.67e-07,3;UBERON:0002165,1.67e-07,3;UBERON:0002062,1.67e-07,3;UBERON:0007280,1.67e-07,3;UBERON:0005418,6.96e-07,1;UBERON:0001389,6.96e-07,1;UBERON:0000026,6.96e-07,1;UBERON:0008784,6.96e-07,1;UBERON:0006058,6.96e-07,1;UBERON:0003663,6.96e-07,1;UBERON:0004256,6.96e-07,1;UBERON:0004708,6.96e-07,1;UBERON:0002101,6.96e-07,1;UBERON:0004709,6.96e-07,1;UBERON:0002529,6.96e-07,1;UBERON:0010538,6.96e-07,1;UBERON:0003661,6.96e-07,1;UBERON:0010890,6.96e-07,1;UBERON:0002471,6.96e-07,1;UBERON:0001383,6.96e-07,1;UBERON:0004357,6.96e-07,1;UBERON:0004347,6.96e-07,1;UBERON:0005420,6.96e-07,1;UBERON:0005732,6.96e-07,1;UBERON:0010758,6.96e-07,1;UBERON:0010707,6.96e-07,1;UBERON:0000978,6.96e-07,1;UBERON:0002103,6.96e-07,1;UBERON:0001665,6.96e-07,1;UBERON:0003823,6.96e-07,1;UBERON:0000154,6.96e-07,1;UBERON:0010709,6.96e-07,1;UBERON:0005733,6.96e-07,1;UBERON:0005730,6.96e-07,1|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4593 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7525 | |||
|TSSclassifier=S | |||
|UniProt=Q5T0B5,Q5VZW9,O15146,F5H3K9,F5H6T2 | |||
|association_with_transcript=0bp_to_ENST00000189978,ENST00000374440,ENST00000374441,ENST00000374447,ENST00000374448,ENST00000543335,ENST00000545907,NM_001166280,NM_001166281,NM_005592_5end | |||
|coexpression_cluster_id=C1107 | |||
|description=CAGE_peak_2_at_MUSK_5end | |||
|id=chr9:113431029..113431050,+ | |||
|ontology_enrichment_celltype=CL:0000188!8.04e-22!9;CL:0000515!1.80e-11!4;CL:0000680!1.32e-09!57;CL:0000056!1.32e-09!57;CL:0000355!1.32e-09!57;CL:0000594!8.12e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000056;8.39e-22;4!CL:0000188;1.43e-20;9!CL:0000680;4.46e-19;7!CL:0000515;3.24e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.88e-22,4;CL:0000188,1.11e-20,9;CL:0000680,2.29e-07,58;CL:0000056,2.29e-07,58;CL:0000355,2.29e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000515;8.39e-22;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-16!115;UBERON:0002385!4.46e-15!63;UBERON:0001015!4.46e-15!63;UBERON:0000383!4.46e-15!63;UBERON:0001134!8.62e-13!61;UBERON:0002036!8.62e-13!61;UBERON:0003082!8.62e-13!61;UBERON:0004290!1.94e-10!70;UBERON:0000059!3.82e-10!11;UBERON:0001155!3.02e-09!9;UBERON:0007100!1.59e-08!27;UBERON:0000486!3.85e-08!82;UBERON:0003978!4.33e-08!3;UBERON:0009751!4.33e-08!3;UBERON:0000946!4.33e-08!3;UBERON:0002523!4.33e-08!3;UBERON:0005983!4.33e-08!3;UBERON:0002165!4.33e-08!3;UBERON:0002062!4.33e-08!3;UBERON:0007280!4.33e-08!3;UBERON:0000914!5.56e-08!83;UBERON:0002329!5.56e-08!83;UBERON:0003077!5.56e-08!83;UBERON:0003059!5.56e-08!83;UBERON:0007282!5.56e-08!83;UBERON:0009618!5.56e-08!83;UBERON:0007285!5.56e-08!83;UBERON:0000481!5.08e-07!347;UBERON:0003104!6.15e-07!238;UBERON:0009142!6.15e-07!238;UBERON:0000160!6.70e-07!27;UBERON:0003103!8.63e-07!69 | |||
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|short_description=p2@MUSK | |||
}} |
Revision as of 06:56, 14 September 2013
Short description: | p2@MUSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MUSK_5end |
Coexpression cluster: | C1107_Myoblast_mesenchymal_skeletal_diaphragm_tongue_Prostate_penis |
Association with transcript: | 0bp_to_ENST00000189978, ENST00000374440, ENST00000374441, ENST00000374447, ENST00000374448, ENST00000543335, ENST00000545907, NM_001166280, NM_001166281, NM_005592_5end |
EntrezGene: | MUSK |
HGNC: | 7525 |
UniProt: | Q5T0B5Q5VZW9O15146F5H3K9F5H6T2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.88e-22 | 4 |
cell of skeletal muscle | 1.11e-20 | 9 |
muscle precursor cell | 2.29e-07 | 58 |
myoblast | 2.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.29e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.