FFCP PHASE1:Hg19::chr9:123691186..123691188,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7185|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12031|TSSclassifier=S|UniProt=Q13077|association_with_transcript=-139bp_to_ENST00000373887_5end|coexpression_cluster_id=C6|description=CAGE_peak_8_at_TRAF1_5end|id=chr9:123691186..123691188,-|ontology_enrichment_celltype=CL:0000738!3.48e-50!140;CL:0002087!8.98e-37!119;CL:0000037!2.65e-36!172;CL:0000566!2.65e-36!172;CL:0002031!8.97e-36!124;CL:0000988!2.67e-35!182;CL:0002032!3.84e-32!165;CL:0000837!3.84e-32!165;CL:0000766!1.54e-26!76;CL:0002057!2.64e-25!42;CL:0000557!3.21e-24!71;CL:0002009!4.29e-23!65;CL:0000860!5.85e-23!45;CL:0000839!1.48e-21!70;CL:0002194!6.74e-21!63;CL:0000576!6.74e-21!63;CL:0000040!6.74e-21!63;CL:0000559!6.74e-21!63;CL:0000763!8.88e-19!112;CL:0000049!8.88e-19!112;CL:0000542!1.40e-12!53;CL:0000051!1.40e-12!53;CL:0000451!1.92e-12!10;CL:0000838!7.43e-12!52;CL:0000791!3.05e-10!18;CL:0000789!3.05e-10!18;CL:0002420!3.05e-10!18;CL:0002419!3.05e-10!18;CL:0000790!3.05e-10!18;CL:0000990!7.40e-10!8;CL:0000134!3.36e-09!358;CL:0002320!1.25e-08!365;CL:0000453!8.25e-08!5|ontology_enrichment_celltype_v019=CL:0000771;2.78e-23;2!CL:0000860;6.62e-19;33!CL:0002057;6.62e-19;33!CL:0002393;8.65e-18;6!CL:0002397;8.65e-18;6!CL:0000623;1.32e-15;3!CL:0000576;8.88e-15;48!CL:0000766;3.55e-13;69!CL:0000473;1.01e-12;39!CL:0000234;1.01e-12;39!CL:0002087;4.28e-10;104!CL:0000763;6.71e-08;100!CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,1.92e-30,42;CL:0002057,1.92e-30,42;CL:0000473,1.83e-26,48;CL:0000234,1.83e-26,48;CL:0002009,3.86e-24,61;CL:0000766,7.11e-24,72;CL:0000771,3.49e-23,2;CL:0000557,7.21e-22,67;CL:0000738,3.08e-21,136;CL:0002194,6.93e-21,59;CL:0000576,6.93e-21,59;CL:0000040,6.93e-21,59;CL:0000559,6.93e-21,59;CL:0000839,1.50e-18,66;CL:0000763,4.74e-18,108;CL:0000049,4.74e-18,108;CL:0000037,8.29e-17,168;CL:0002087,9.05e-17,115;CL:0002031,4.98e-16,120;CL:0000988,7.57e-16,177;CL:0000623,1.42e-15,3;CL:0000825,1.42e-15,3;CL:0002032,2.03e-15,161;CL:0000837,2.03e-15,161;CL:0002393,4.68e-12,9;CL:0002397,4.68e-12,9;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0001014,5.73e-07,2;CL:0001016,5.73e-07,2;CL:0000219,5.99e-07,386|ontology_enrichment_development_v019=CL:0002057;2.41e-20;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.34e-22!102;UBERON:0003061!1.34e-22!102;UBERON:0002371!2.72e-21!80;UBERON:0002193!3.15e-20!112;UBERON:0001474!5.66e-20!86;UBERON:0004765!3.72e-15!101;UBERON:0001434!3.72e-15!101;UBERON:0002405!2.52e-13!115;UBERON:0002384!2.83e-08!375;UBERON:0002204!9.84e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.02e-19,76;UBERON:0001474,1.27e-17,82;UBERON:0002390,3.77e-17,98;UBERON:0003061,3.77e-17,98;UBERON:0004765,6.31e-16,90;UBERON:0002193,2.07e-15,108;UBERON:0002405,2.30e-15,93;UBERON:0001434,3.49e-14,100;UBERON:0002204,7.81e-08,167;UBERON:0002384,2.22e-07,371;UBERON:0003081,2.39e-07,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.236132343941038,0.786728553697808,0.383829398097213,0,0,0,0,0.154934401160603,0,0,9.97191735357379,5.21415563422368,5.20826089718044,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0,0.236482229888585,1.72372840368309,0,1.35426486594342,0,0,0.224723484445085,1.53041946185451,0.320929027076094,1.91801137739712,0.329851300186716,0.199463657621632,0,0.870627715885752,1.70215567407342,0.622822248995575,0,0,0,1.21079900526674,1.47311054395026,1.26584954976354,0,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0.473447805734733,0,0.557052284425868,0.589211814949674,0.221533894583621,0,0.768547918354051,0.780356085359269,0.493313713811028,0.829050053357545,0.579606171470105,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1821845612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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12031 | |||
|TSSclassifier=S | |||
|UniProt=Q13077 | |||
|association_with_transcript=-139bp_to_ENST00000373887_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_8_at_TRAF1_5end | |||
|id=chr9:123691186..123691188,- | |||
|ontology_enrichment_celltype=CL:0000738!3.48e-50!140;CL:0002087!8.98e-37!119;CL:0000037!2.65e-36!172;CL:0000566!2.65e-36!172;CL:0002031!8.97e-36!124;CL:0000988!2.67e-35!182;CL:0002032!3.84e-32!165;CL:0000837!3.84e-32!165;CL:0000766!1.54e-26!76;CL:0002057!2.64e-25!42;CL:0000557!3.21e-24!71;CL:0002009!4.29e-23!65;CL:0000860!5.85e-23!45;CL:0000839!1.48e-21!70;CL:0002194!6.74e-21!63;CL:0000576!6.74e-21!63;CL:0000040!6.74e-21!63;CL:0000559!6.74e-21!63;CL:0000763!8.88e-19!112;CL:0000049!8.88e-19!112;CL:0000542!1.40e-12!53;CL:0000051!1.40e-12!53;CL:0000451!1.92e-12!10;CL:0000838!7.43e-12!52;CL:0000791!3.05e-10!18;CL:0000789!3.05e-10!18;CL:0002420!3.05e-10!18;CL:0002419!3.05e-10!18;CL:0000790!3.05e-10!18;CL:0000990!7.40e-10!8;CL:0000134!3.36e-09!358;CL:0002320!1.25e-08!365;CL:0000453!8.25e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000771;2.78e-23;2!CL:0000860;6.62e-19;33!CL:0002057;6.62e-19;33!CL:0002393;8.65e-18;6!CL:0002397;8.65e-18;6!CL:0000623;1.32e-15;3!CL:0000576;8.88e-15;48!CL:0000766;3.55e-13;69!CL:0000473;1.01e-12;39!CL:0000234;1.01e-12;39!CL:0002087;4.28e-10;104!CL:0000763;6.71e-08;100!CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.92e-30,42;CL:0002057,1.92e-30,42;CL:0000473,1.83e-26,48;CL:0000234,1.83e-26,48;CL:0002009,3.86e-24,61;CL:0000766,7.11e-24,72;CL:0000771,3.49e-23,2;CL:0000557,7.21e-22,67;CL:0000738,3.08e-21,136;CL:0002194,6.93e-21,59;CL:0000576,6.93e-21,59;CL:0000040,6.93e-21,59;CL:0000559,6.93e-21,59;CL:0000839,1.50e-18,66;CL:0000763,4.74e-18,108;CL:0000049,4.74e-18,108;CL:0000037,8.29e-17,168;CL:0002087,9.05e-17,115;CL:0002031,4.98e-16,120;CL:0000988,7.57e-16,177;CL:0000623,1.42e-15,3;CL:0000825,1.42e-15,3;CL:0002032,2.03e-15,161;CL:0000837,2.03e-15,161;CL:0002393,4.68e-12,9;CL:0002397,4.68e-12,9;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0001014,5.73e-07,2;CL:0001016,5.73e-07,2;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.41e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-22!102;UBERON:0003061!1.34e-22!102;UBERON:0002371!2.72e-21!80;UBERON:0002193!3.15e-20!112;UBERON:0001474!5.66e-20!86;UBERON:0004765!3.72e-15!101;UBERON:0001434!3.72e-15!101;UBERON:0002405!2.52e-13!115;UBERON:0002384!2.83e-08!375;UBERON:0002204!9.84e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.02e-19,76;UBERON:0001474,1.27e-17,82;UBERON:0002390,3.77e-17,98;UBERON:0003061,3.77e-17,98;UBERON:0004765,6.31e-16,90;UBERON:0002193,2.07e-15,108;UBERON:0002405,2.30e-15,93;UBERON:0001434,3.49e-14,100;UBERON:0002204,7.81e-08,167;UBERON:0002384,2.22e-07,371;UBERON:0003081,2.39e-07,203 | |||
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|short_description=p8@TRAF1 | |||
}} |
Revision as of 07:16, 14 September 2013
Short description: | p8@TRAF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TRAF1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -139bp_to_ENST00000373887_5end |
EntrezGene: | TRAF1 |
HGNC: | 12031 |
UniProt: | Q13077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.02e-19 | 76 |
bone element | 1.27e-17 | 82 |
hematopoietic system | 3.77e-17 | 98 |
blood island | 3.77e-17 | 98 |
skeletal element | 6.31e-16 | 90 |
hemolymphoid system | 2.07e-15 | 108 |
immune system | 2.30e-15 | 93 |
skeletal system | 3.49e-14 | 100 |
musculoskeletal system | 7.81e-08 | 167 |
connective tissue | 2.22e-07 | 371 |
lateral plate mesoderm | 2.39e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.