FFCP PHASE1:Mm9::chr5:53452606..53452617,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=996|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:53452606..53452617,+|id=chr5:53452606..53452617,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!4.03e-18!17;UBERON:0002048!1.60e-15!14;UBERON:0000117!1.60e-15!14;UBERON:0000171!1.60e-15!14;UBERON:0000170!1.60e-15!14;UBERON:0005597!1.60e-15!14;UBERON:0000118!1.60e-15!14;UBERON:0005178!2.24e-12!17;UBERON:0005181!2.24e-12!17;UBERON:0002224!2.24e-12!17;UBERON:0000915!2.24e-12!17;UBERON:0008947!2.24e-12!17;UBERON:0003258!2.24e-12!17;UBERON:0005157!2.55e-10!27;UBERON:0000160!3.23e-09!43;UBERON:0001007!3.58e-07!128;UBERON:0001555!3.58e-07!128;UBERON:0007026!3.58e-07!128;UBERON:0004119!5.81e-07!130;UBERON:0000925!5.81e-07!130;UBERON:0006595!5.81e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.96e-37,17;UBERON:0002048,6.45e-36,14;UBERON:0000117,6.45e-36,14;UBERON:0000171,6.45e-36,14;UBERON:0000170,6.45e-36,14;UBERON:0005597,6.45e-36,14;UBERON:0000118,6.45e-36,14;UBERON:0005157,9.20e-32,20;UBERON:0005178,1.58e-29,17;UBERON:0005181,1.58e-29,17;UBERON:0002224,1.58e-29,17;UBERON:0000915,1.58e-29,17;UBERON:0008947,1.58e-29,17;UBERON:0003258,1.58e-29,17;UBERON:0000065,5.36e-12,41;UBERON:0001004,1.06e-11,42;UBERON:0000331,1.37e-11,3;UBERON:0002116,1.37e-11,3;UBERON:0001204,1.37e-11,3;UBERON:0001168,1.37e-11,3;UBERON:0002108,6.37e-09,4;UBERON:0009569,3.10e-07,66;UBERON:0005911,6.81e-07,69|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,2.47030445293286,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0,0,0.502518772325447,2.14239276797412,1.95133647857799,1.10344600874334,0.44292937929755,1.59454768657487,2.29408640602033,2.59027472798843,3.7608755231193,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0|short_description=p@chr5:53452606..53452617,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=996 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:53452606..53452617,+ | |||
|id=chr5:53452606..53452617,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!4.03e-18!17;UBERON:0002048!1.60e-15!14;UBERON:0000117!1.60e-15!14;UBERON:0000171!1.60e-15!14;UBERON:0000170!1.60e-15!14;UBERON:0005597!1.60e-15!14;UBERON:0000118!1.60e-15!14;UBERON:0005178!2.24e-12!17;UBERON:0005181!2.24e-12!17;UBERON:0002224!2.24e-12!17;UBERON:0000915!2.24e-12!17;UBERON:0008947!2.24e-12!17;UBERON:0003258!2.24e-12!17;UBERON:0005157!2.55e-10!27;UBERON:0000160!3.23e-09!43;UBERON:0001007!3.58e-07!128;UBERON:0001555!3.58e-07!128;UBERON:0007026!3.58e-07!128;UBERON:0004119!5.81e-07!130;UBERON:0000925!5.81e-07!130;UBERON:0006595!5.81e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.96e-37,17;UBERON:0002048,6.45e-36,14;UBERON:0000117,6.45e-36,14;UBERON:0000171,6.45e-36,14;UBERON:0000170,6.45e-36,14;UBERON:0005597,6.45e-36,14;UBERON:0000118,6.45e-36,14;UBERON:0005157,9.20e-32,20;UBERON:0005178,1.58e-29,17;UBERON:0005181,1.58e-29,17;UBERON:0002224,1.58e-29,17;UBERON:0000915,1.58e-29,17;UBERON:0008947,1.58e-29,17;UBERON:0003258,1.58e-29,17;UBERON:0000065,5.36e-12,41;UBERON:0001004,1.06e-11,42;UBERON:0000331,1.37e-11,3;UBERON:0002116,1.37e-11,3;UBERON:0001204,1.37e-11,3;UBERON:0001168,1.37e-11,3;UBERON:0002108,6.37e-09,4;UBERON:0009569,3.10e-07,66;UBERON:0005911,6.81e-07,69 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0.215471232685889,2.47030445293286,1.26015064879965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,0,0,0,0,0.502518772325447,2.14239276797412,1.95133647857799,1.10344600874334,0.44292937929755,1.59454768657487,2.29408640602033,2.59027472798843,3.7608755231193,0,0,2.45882136509518,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p@chr5:53452606..53452617,+ | |||
}} |
Revision as of 07:45, 14 September 2013
Short description: | p@chr5:53452606..53452617, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:53452606..53452617, + |
Coexpression cluster: | MCL_coexpression_mm9:996 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 1.96e-37 | 17 |
lung | 6.45e-36 | 14 |
respiratory tube | 6.45e-36 | 14 |
respiration organ | 6.45e-36 | 14 |
pair of lungs | 6.45e-36 | 14 |
lung primordium | 6.45e-36 | 14 |
lung bud | 6.45e-36 | 14 |
epithelial fold | 9.20e-32 | 20 |
thoracic cavity element | 1.58e-29 | 17 |
thoracic segment organ | 1.58e-29 | 17 |
thoracic cavity | 1.58e-29 | 17 |
thoracic segment of trunk | 1.58e-29 | 17 |
respiratory primordium | 1.58e-29 | 17 |
endoderm of foregut | 1.58e-29 | 17 |
respiratory tract | 5.36e-12 | 41 |
respiratory system | 1.06e-11 | 42 |
ileal mucosa | 1.37e-11 | 3 |
ileum | 1.37e-11 | 3 |
mucosa of small intestine | 1.37e-11 | 3 |
wall of small intestine | 1.37e-11 | 3 |
small intestine | 6.37e-09 | 4 |
subdivision of trunk | 3.10e-07 | 66 |
endo-epithelium | 6.81e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.