FFCP PHASE1:Hg19::chrX:153059608..153059650,+: Difference between revisions
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{{FFCP | 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51,1.24329698497822,0.85359238546975,1.38251932362818,1.72090943528111,0.473328002922261,0.340853619036631,1.69354820076372,0.4582137370881,0.93061915699296,0,0.671132590786754,0.588901401691458,1.95068679971631,1.29485767437579,0.410651227424988,1.1598144313382,0,1.87151570769685,0.397901550322736,0.951360726220549,0.45178432815584,0.439762066981716,0.452888530700021,0.385870790539723,0.437119121007915,0.940634592723046,0.735444965261716,0.942706188406504,1.37415926980462,0.297046400327086,0.4226557275834,0.849635573439084,0.845855261818682,0.386747327841463,0.699588091474503,0.535661815816973,1.41157948686277,0.962896400270019,0.730336388246517,3.66983426723633,1.00337708206016,1.89325874631822,1.08786384305464,0.436350690340377,1.5870805215462,1.85997509083376,1.38652688589425,1.29787968637137,1.64016352285603,2.18531143927391,5.57473404450323,3.05966489225945,2.40495664739004,0.459474497674225,0.250707539292375,3.10692662694782,4.28742608249886,0.829169439458779,0.310298987585686,0.213233981900981,1.42838658878244,0.258355639344024,0.124149428591716,0.784923038064294,0.509177266225319,0.202117188958219,1.95945073107265,0.342233301085281,0.673520530145875,0.932388670104793,0.665320713092027,0.89543595472072,1.17400080465487,0,1.43720323370539,0,0.366724332548599,0,1.33151354837103,0.402547587182052,0.320568492303233|short_description=p3@SSR4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6748 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11326 | |||
|TSSclassifier=S | |||
|UniProt=P51571 | |||
|association_with_transcript=0bp_to_ENST00000370087,ENST00000491833,NM_001204527_5end | |||
|description=CAGE_peak_3_at_SSR4_5end | |||
|id=chrX:153059608..153059650,+ | |||
|ontology_enrichment_celltype=CL:0002321!9.85e-14!248;CL:0000220!4.83e-13!246;CL:0000055!7.44e-13!180;CL:0000222!2.75e-10!119;CL:0000359!5.00e-08!32;CL:0000393!7.36e-08!60;CL:0000211!7.36e-08!60;CL:0000183!1.24e-07!59;CL:0000192!1.33e-07!42;CL:0000514!1.33e-07!42;CL:0000680!3.78e-07!57;CL:0000056!3.78e-07!57;CL:0000355!3.78e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.33e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.13e-11,250;CL:0000222,3.09e-10,121;CL:0000359,2.71e-09,32;CL:0000192,1.20e-08,43;CL:0000514,1.20e-08,43;CL:0000393,3.30e-08,61;CL:0000211,3.30e-08,61;CL:0000680,1.38e-07,58;CL:0000056,1.38e-07,58;CL:0000355,1.38e-07,58;CL:0000187,8.56e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.25e-09!216;UBERON:0001637!1.38e-08!42;UBERON:0003509!1.38e-08!42;UBERON:0004572!1.38e-08!42;UBERON:0004872!9.48e-08!84;UBERON:0003914!2.16e-07!118;UBERON:0001134!2.61e-07!61;UBERON:0002036!2.61e-07!61;UBERON:0003082!2.61e-07!61;UBERON:0002049!2.80e-07!79;UBERON:0007798!2.80e-07!79;UBERON:0000486!3.05e-07!82;UBERON:0004290!3.75e-07!70;UBERON:0003104!4.34e-07!238;UBERON:0009142!4.34e-07!238;UBERON:0002385!6.81e-07!63;UBERON:0001015!6.81e-07!63;UBERON:0000383!6.81e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.45e-07;42!UBERON:0003509;8.45e-07;42!UBERON:0004572;8.45e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.41e-10,42;UBERON:0003509,5.41e-10,42;UBERON:0004572,5.41e-10,42;UBERON:0007503,1.17e-09,78;UBERON:0002100,1.40e-08,199;UBERON:0004872,2.15e-08,83;UBERON:0007500,3.88e-08,59;UBERON:0001981,3.88e-08,59;UBERON:0004537,3.88e-08,59;UBERON:0006965,3.88e-08,59;UBERON:0007524,5.69e-08,73;UBERON:0001134,7.56e-08,62;UBERON:0002036,7.56e-08,62;UBERON:0003082,7.56e-08,62;UBERON:0002329,8.63e-08,71;UBERON:0003059,8.63e-08,71;UBERON:0007282,8.63e-08,71;UBERON:0004290,8.63e-08,71;UBERON:0009618,8.63e-08,71;UBERON:0003914,1.03e-07,117;UBERON:0003104,1.32e-07,160;UBERON:0009142,1.32e-07,160;UBERON:0000486,1.35e-07,83;UBERON:0005256,1.68e-07,122;UBERON:0003077,1.70e-07,72;UBERON:0007285,1.70e-07,72;UBERON:0002049,2.10e-07,78;UBERON:0007798,2.10e-07,78;UBERON:0002385,3.22e-07,64;UBERON:0001015,3.22e-07,64;UBERON:0000383,3.22e-07,64;UBERON:0000055,4.35e-07,68 | |||
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| |||
|short_description=p3@SSR4 | |||
}} |
Revision as of 11:18, 14 September 2013
Short description: | p3@SSR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SSR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370087, ENST00000491833, NM_001204527_5end |
EntrezGene: | SSR4 |
HGNC: | 11326 |
UniProt: | P51571 |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.13e-11 | 250 |
mesodermal cell | 3.09e-10 | 121 |
vascular associated smooth muscle cell | 2.71e-09 | 32 |
smooth muscle cell | 1.20e-08 | 43 |
smooth muscle myoblast | 1.20e-08 | 43 |
electrically responsive cell | 3.30e-08 | 61 |
electrically active cell | 3.30e-08 | 61 |
muscle precursor cell | 1.38e-07 | 58 |
myoblast | 1.38e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-07 | 58 |
muscle cell | 8.56e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 5.41e-10 | 42 |
arterial blood vessel | 5.41e-10 | 42 |
arterial system | 5.41e-10 | 42 |
epithelial vesicle | 1.17e-09 | 78 |
trunk | 1.40e-08 | 199 |
splanchnic layer of lateral plate mesoderm | 2.15e-08 | 83 |
epithelial tube open at both ends | 3.88e-08 | 59 |
blood vessel | 3.88e-08 | 59 |
blood vasculature | 3.88e-08 | 59 |
vascular cord | 3.88e-08 | 59 |
dense mesenchyme tissue | 5.69e-08 | 73 |
skeletal muscle tissue | 7.56e-08 | 62 |
striated muscle tissue | 7.56e-08 | 62 |
myotome | 7.56e-08 | 62 |
somite | 8.63e-08 | 71 |
presomitic mesoderm | 8.63e-08 | 71 |
presumptive segmental plate | 8.63e-08 | 71 |
dermomyotome | 8.63e-08 | 71 |
trunk paraxial mesoderm | 8.63e-08 | 71 |
epithelial tube | 1.03e-07 | 117 |
mesenchyme | 1.32e-07 | 160 |
entire embryonic mesenchyme | 1.32e-07 | 160 |
multilaminar epithelium | 1.35e-07 | 83 |
trunk mesenchyme | 1.68e-07 | 122 |
paraxial mesoderm | 1.70e-07 | 72 |
presumptive paraxial mesoderm | 1.70e-07 | 72 |
vasculature | 2.10e-07 | 78 |
vascular system | 2.10e-07 | 78 |
muscle tissue | 3.22e-07 | 64 |
musculature | 3.22e-07 | 64 |
musculature of body | 3.22e-07 | 64 |
vessel | 4.35e-07 | 68 |
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