FFCP PHASE1:Hg19::chrX:17024327..17024358,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9185|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9963|TSSclassifier=S|UniProt=Q59H22|association_with_transcript=0bp_to_AB208937_5end|coexpression_cluster_id=C2|description=CAGE_peak_3_at_REPS2_5end|id=chrX:17024327..17024358,+|ontology_enrichment_celltype=CL:0002057!8.89e-33!42;CL:0000860!1.40e-29!45;CL:0000738!2.38e-22!140;CL:0000766!5.12e-21!76;CL:0002009!4.05e-18!65;CL:0000037!4.03e-17!172;CL:0000566!4.03e-17!172;CL:0000763!7.27e-17!112;CL:0000049!7.27e-17!112;CL:0002194!1.40e-16!63;CL:0000576!1.40e-16!63;CL:0000040!1.40e-16!63;CL:0000559!1.40e-16!63;CL:0002032!1.62e-16!165;CL:0000837!1.62e-16!165;CL:0002087!6.11e-16!119;CL:0000557!1.92e-15!71;CL:0000839!2.74e-15!70;CL:0002031!3.47e-15!124;CL:0000988!6.60e-15!182;CL:0000094!9.18e-11!8;CL:0000081!3.74e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.95e-48;33!CL:0002057;1.95e-48;33!CL:0000473;1.30e-33;39!CL:0000234;1.30e-33;39!CL:0000576;6.66e-26;48!CL:0000766;7.02e-20;69!CL:0000094;3.76e-19;8!CL:0000081;1.88e-13;11!CL:0000763;1.42e-09;100!CL:0000738;7.99e-09;136!CL:0000775;9.06e-09;3!CL:0002087;1.91e-08;104!CL:0000767;2.02e-07;3!CL:0002623;3.07e-07;3!CL:0000453;3.12e-07;5|ontology_enrichment_celltype_v019_2=CL:0000860,2.33e-49,42;CL:0002057,2.33e-49,42;CL:0000473,6.25e-42,48;CL:0000234,6.25e-42,48;CL:0000766,9.97e-42,72;CL:0002009,1.23e-34,61;CL:0000738,9.54e-34,136;CL:0000763,1.12e-31,108;CL:0000049,1.12e-31,108;CL:0002194,1.45e-31,59;CL:0000576,1.45e-31,59;CL:0000040,1.45e-31,59;CL:0000559,1.45e-31,59;CL:0000557,1.15e-30,67;CL:0000839,2.99e-27,66;CL:0002032,4.73e-26,161;CL:0000837,4.73e-26,161;CL:0000037,1.10e-25,168;CL:0000988,1.24e-23,177;CL:0002087,4.86e-22,115;CL:0002031,7.00e-22,120;CL:0000094,2.69e-19,8;CL:0000081,1.48e-13,11;CL:0000775,9.08e-09,3;CL:0000767,1.46e-07,3;CL:0002623,2.61e-07,3;CL:0000453,2.71e-07,5|ontology_enrichment_development_v019=CL:0002057;4.78e-36;42!CL:0000049;6.65e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.58e-31!115;UBERON:0002193!2.52e-25!112;UBERON:0002390!1.38e-23!102;UBERON:0003061!1.38e-23!102;UBERON:0002405!5.76e-14!115;UBERON:0002371!3.60e-13!80;UBERON:0001474!2.36e-11!86;UBERON:0000178!9.03e-11!15;UBERON:0000179!9.03e-11!15;UBERON:0000463!9.03e-11!15;UBERON:0004765!7.29e-09!101;UBERON:0001434!7.29e-09!101;UBERON:0001049!6.02e-07!57;UBERON:0005068!6.02e-07!57;UBERON:0006241!6.02e-07!57;UBERON:0007135!6.02e-07!57|ontology_enrichment_uberon_v019=UBERON:0000178;3.13e-15;15!UBERON:0000179;3.13e-15;15!UBERON:0000463;3.13e-15;15!UBERON:0002390;6.13e-11;32!UBERON:0002106;1.07e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.24e-43,98;UBERON:0003061,5.24e-43,98;UBERON:0002193,1.40e-39,108;UBERON:0002371,1.25e-27,76;UBERON:0002405,4.32e-27,93;UBERON:0001474,7.02e-25,82;UBERON:0004765,8.63e-22,90;UBERON:0001434,1.23e-18,100;UBERON:0000178,2.89e-15,15;UBERON:0000179,2.89e-15,15;UBERON:0000463,2.89e-15,15;UBERON:0003081,1.01e-14,203;UBERON:0002204,3.25e-08,167;UBERON:0000926,4.43e-08,315;UBERON:0004120,4.43e-08,315;UBERON:0006603,4.43e-08,315;UBERON:0002106,8.86e-08,3;UBERON:0004854,8.86e-08,3;UBERON:0009034,8.86e-08,3;UBERON:0002095,8.86e-08,3;UBERON:0004782,8.86e-08,3;UBERON:0003281,8.86e-08,3;UBERON:0009664,8.86e-08,3;UBERON:0002296,8.86e-08,3;UBERON:0005602,8.86e-08,3;UBERON:0001179,8.86e-08,3;UBERON:0006293,8.86e-08,3|phase1_expression=0,1.07050261945492,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.821005894499457,1.02324015707783,26.3554065488766,3.83829398097213,1.85779347979291,0,0,0,0,0,0,4.43196326825502,2.60707781711184,3.47217393145363,0,0,0,2.76256653681173,2.26725566213286,4.12392904019288,3.0215774797739,2.05583944010913,4.02618282163635,0.863077176966451,2.56160706529101,5.20260905754887,1.03423704220986,3.87290810150296,4.06279459783025,4.1413314699373,3.0019676506363,6.06753408001728,1.83650335422542,0.962787081228281,4.47535988059329,1.9791078011203,2.59302754908121,6.39337125799041,4.35313857942876,6.80862269629368,12.4564449799115,1.00499466102697,1.5644487552606,3.9093992046921,4.23779651843358,7.73383035573886,20.2535927962166,0,0,0.419317291016752,0.673971786878971,1.05123824989054,1.6072558669708,0,0,0.182664153764634,0,1.09227722252426,0,1.70692089026603,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.255973222308837,2.49861453104692,2.13099526839615,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,138.369438307866,190.012329432679,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0.433099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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9185 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9963 | |||
|TSSclassifier=S | |||
|UniProt=Q59H22 | |||
|association_with_transcript=0bp_to_AB208937_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_REPS2_5end | |||
|id=chrX:17024327..17024358,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.89e-33!42;CL:0000860!1.40e-29!45;CL:0000738!2.38e-22!140;CL:0000766!5.12e-21!76;CL:0002009!4.05e-18!65;CL:0000037!4.03e-17!172;CL:0000566!4.03e-17!172;CL:0000763!7.27e-17!112;CL:0000049!7.27e-17!112;CL:0002194!1.40e-16!63;CL:0000576!1.40e-16!63;CL:0000040!1.40e-16!63;CL:0000559!1.40e-16!63;CL:0002032!1.62e-16!165;CL:0000837!1.62e-16!165;CL:0002087!6.11e-16!119;CL:0000557!1.92e-15!71;CL:0000839!2.74e-15!70;CL:0002031!3.47e-15!124;CL:0000988!6.60e-15!182;CL:0000094!9.18e-11!8;CL:0000081!3.74e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-48;33!CL:0002057;1.95e-48;33!CL:0000473;1.30e-33;39!CL:0000234;1.30e-33;39!CL:0000576;6.66e-26;48!CL:0000766;7.02e-20;69!CL:0000094;3.76e-19;8!CL:0000081;1.88e-13;11!CL:0000763;1.42e-09;100!CL:0000738;7.99e-09;136!CL:0000775;9.06e-09;3!CL:0002087;1.91e-08;104!CL:0000767;2.02e-07;3!CL:0002623;3.07e-07;3!CL:0000453;3.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.33e-49,42;CL:0002057,2.33e-49,42;CL:0000473,6.25e-42,48;CL:0000234,6.25e-42,48;CL:0000766,9.97e-42,72;CL:0002009,1.23e-34,61;CL:0000738,9.54e-34,136;CL:0000763,1.12e-31,108;CL:0000049,1.12e-31,108;CL:0002194,1.45e-31,59;CL:0000576,1.45e-31,59;CL:0000040,1.45e-31,59;CL:0000559,1.45e-31,59;CL:0000557,1.15e-30,67;CL:0000839,2.99e-27,66;CL:0002032,4.73e-26,161;CL:0000837,4.73e-26,161;CL:0000037,1.10e-25,168;CL:0000988,1.24e-23,177;CL:0002087,4.86e-22,115;CL:0002031,7.00e-22,120;CL:0000094,2.69e-19,8;CL:0000081,1.48e-13,11;CL:0000775,9.08e-09,3;CL:0000767,1.46e-07,3;CL:0002623,2.61e-07,3;CL:0000453,2.71e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;4.78e-36;42!CL:0000049;6.65e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-31!115;UBERON:0002193!2.52e-25!112;UBERON:0002390!1.38e-23!102;UBERON:0003061!1.38e-23!102;UBERON:0002405!5.76e-14!115;UBERON:0002371!3.60e-13!80;UBERON:0001474!2.36e-11!86;UBERON:0000178!9.03e-11!15;UBERON:0000179!9.03e-11!15;UBERON:0000463!9.03e-11!15;UBERON:0004765!7.29e-09!101;UBERON:0001434!7.29e-09!101;UBERON:0001049!6.02e-07!57;UBERON:0005068!6.02e-07!57;UBERON:0006241!6.02e-07!57;UBERON:0007135!6.02e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.13e-15;15!UBERON:0000179;3.13e-15;15!UBERON:0000463;3.13e-15;15!UBERON:0002390;6.13e-11;32!UBERON:0002106;1.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.24e-43,98;UBERON:0003061,5.24e-43,98;UBERON:0002193,1.40e-39,108;UBERON:0002371,1.25e-27,76;UBERON:0002405,4.32e-27,93;UBERON:0001474,7.02e-25,82;UBERON:0004765,8.63e-22,90;UBERON:0001434,1.23e-18,100;UBERON:0000178,2.89e-15,15;UBERON:0000179,2.89e-15,15;UBERON:0000463,2.89e-15,15;UBERON:0003081,1.01e-14,203;UBERON:0002204,3.25e-08,167;UBERON:0000926,4.43e-08,315;UBERON:0004120,4.43e-08,315;UBERON:0006603,4.43e-08,315;UBERON:0002106,8.86e-08,3;UBERON:0004854,8.86e-08,3;UBERON:0009034,8.86e-08,3;UBERON:0002095,8.86e-08,3;UBERON:0004782,8.86e-08,3;UBERON:0003281,8.86e-08,3;UBERON:0009664,8.86e-08,3;UBERON:0002296,8.86e-08,3;UBERON:0005602,8.86e-08,3;UBERON:0001179,8.86e-08,3;UBERON:0006293,8.86e-08,3 | |||
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| |||
|short_description=p3@REPS2 | |||
}} |
Revision as of 11:29, 14 September 2013
Short description: | p3@REPS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_REPS2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_AB208937_5end |
EntrezGene: | REPS2 |
HGNC: | 9963 |
UniProt: | Q59H22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.33e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-49 | 42 |
defensive cell | 6.25e-42 | 48 |
phagocyte | 6.25e-42 | 48 |
myeloid leukocyte | 9.97e-42 | 72 |
macrophage dendritic cell progenitor | 1.23e-34 | 61 |
leukocyte | 9.54e-34 | 136 |
myeloid cell | 1.12e-31 | 108 |
common myeloid progenitor | 1.12e-31 | 108 |
monopoietic cell | 1.45e-31 | 59 |
monocyte | 1.45e-31 | 59 |
monoblast | 1.45e-31 | 59 |
promonocyte | 1.45e-31 | 59 |
granulocyte monocyte progenitor cell | 1.15e-30 | 67 |
myeloid lineage restricted progenitor cell | 2.99e-27 | 66 |
hematopoietic oligopotent progenitor cell | 4.73e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-26 | 161 |
hematopoietic stem cell | 1.10e-25 | 168 |
hematopoietic cell | 1.24e-23 | 177 |
nongranular leukocyte | 4.86e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 7.00e-22 | 120 |
granulocyte | 2.69e-19 | 8 |
blood cell | 1.48e-13 | 11 |
neutrophil | 9.08e-09 | 3 |
basophil | 1.46e-07 | 3 |
acinar cell of salivary gland | 2.61e-07 | 3 |
Langerhans cell | 2.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.24e-43 | 98 |
blood island | 5.24e-43 | 98 |
hemolymphoid system | 1.40e-39 | 108 |
bone marrow | 1.25e-27 | 76 |
immune system | 4.32e-27 | 93 |
bone element | 7.02e-25 | 82 |
skeletal element | 8.63e-22 | 90 |
skeletal system | 1.23e-18 | 100 |
blood | 2.89e-15 | 15 |
haemolymphatic fluid | 2.89e-15 | 15 |
organism substance | 2.89e-15 | 15 |
lateral plate mesoderm | 1.01e-14 | 203 |
musculoskeletal system | 3.25e-08 | 167 |
mesoderm | 4.43e-08 | 315 |
mesoderm-derived structure | 4.43e-08 | 315 |
presumptive mesoderm | 4.43e-08 | 315 |
spleen | 8.86e-08 | 3 |
gastrointestinal system mesentery | 8.86e-08 | 3 |
stomach region | 8.86e-08 | 3 |
mesentery | 8.86e-08 | 3 |
gastrointestinal system serosa | 8.86e-08 | 3 |
mesentery of stomach | 8.86e-08 | 3 |
gut mesentery | 8.86e-08 | 3 |
dorsal mesentery | 8.86e-08 | 3 |
dorsal mesogastrium | 8.86e-08 | 3 |
peritoneal cavity | 8.86e-08 | 3 |
spleen primordium | 8.86e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.