FFCP PHASE1:Mm9::chr7:35098550..35098587,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=233103|HGNC=|UniProt=Q3UYG5,Q8C5X1|association_with_transcript=0bp_to_ENSMUST00000108073,ENSMUST00000108074,ENSMUST00000132975,uc009gjb.1_5end|description=CAGE_peak_1_at_4931406P16Rik_5end|id=chr7:35098550..35098587,-|ontology_enrichment_celltype=CL:0000055!2.05e-07!50;CL:0000107!9.60e-07!9;CL:0000221!9.88e-07!44;CL:0000133!9.88e-07!44|ontology_enrichment_celltype_v019_2=CL:0000107,9.60e-07,9;CL:0000221,9.88e-07,44;CL:0000133,9.88e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.15e-09!333;UBERON:0000025!4.27e-09!114;UBERON:0004111!3.65e-08!122;UBERON:0004121!5.83e-08!102;UBERON:0000924!5.83e-08!102;UBERON:0006601!5.83e-08!102;UBERON:0002048!9.64e-08!14;UBERON:0000117!9.64e-08!14;UBERON:0000171!9.64e-08!14;UBERON:0000170!9.64e-08!14;UBERON:0005597!9.64e-08!14;UBERON:0000118!9.64e-08!14;UBERON:0003103!1.45e-07!43;UBERON:0004535!3.07e-07!23;UBERON:0001009!3.07e-07!23;UBERON:0007100!3.27e-07!18;UBERON:0000948!3.27e-07!18;UBERON:0005498!3.27e-07!18;UBERON:0004140!3.27e-07!18;UBERON:0009881!3.27e-07!18;UBERON:0004141!3.27e-07!18;UBERON:0003084!3.27e-07!18;UBERON:0007005!3.27e-07!18;UBERON:0004139!3.27e-07!18;UBERON:0004291!3.27e-07!18;UBERON:0000010!3.67e-07!11;UBERON:0004872!4.84e-07!33;UBERON:0005157!5.59e-07!27;UBERON:0000073!6.79e-07!75;UBERON:0001016!6.79e-07!75;UBERON:0002410!9.60e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.27e-09,114;UBERON:0010314,3.09e-08,92;UBERON:0004111,3.65e-08,122;UBERON:0005157,5.07e-08,20;UBERON:0004121,6.42e-08,95;UBERON:0000924,6.42e-08,95;UBERON:0006601,6.42e-08,95;UBERON:0002048,9.64e-08,14;UBERON:0000117,9.64e-08,14;UBERON:0000171,9.64e-08,14;UBERON:0000170,9.64e-08,14;UBERON:0005597,9.64e-08,14;UBERON:0000118,9.64e-08,14;UBERON:0003103,1.45e-07,43;UBERON:0004535,3.07e-07,23;UBERON:0001009,3.07e-07,23;UBERON:0007100,3.27e-07,18;UBERON:0000948,3.27e-07,18;UBERON:0005498,3.27e-07,18;UBERON:0004140,3.27e-07,18;UBERON:0009881,3.27e-07,18;UBERON:0004141,3.27e-07,18;UBERON:0003084,3.27e-07,18;UBERON:0007005,3.27e-07,18;UBERON:0004139,3.27e-07,18;UBERON:0004291,3.27e-07,18;UBERON:0000010,3.67e-07,11;UBERON:0004872,4.84e-07,33;UBERON:0001016,6.79e-07,75;UBERON:0002410,9.60e-07,9|phase1_expression=12.6517589212787,2.79180326111489,3.63999391511629,3.62957053568196,3.00537437967808,5.20425742926858,5.84031601488814,4.51931632045517,10.13678799492,8.89445200023575,9.58820622062828,7.0199499915896,5.82082481766099,6.8187913886818,18.3210368998615,15.1856450542369,13.2916756844348,10.7257136221801,13.5743289269681,9.76096199135469,23.131774921091,6.25532992565577,5.74639536105658,6.07971206614945,2.98232065387321,1.72269589234506,3.4460959692726,4.30942465371778,4.3705386474966,2.77233142735924,2.66076612786366,8.89042942843484,11.0711661765223,0,3.17736781726402,2.65975432573588,2.85837098767317,7.95210098400125,2.3440060335714,3.66466620781659,3.52938892818609,4.09827290975067,7.76816564849846,15.485308610996,18.2478476195126,19.6395024812999,25.8189143634853,25.5089432965122,18.0142669842267,26.053606475954,27.2973522169457,25.8754615856949,15.268217151254,12.3311564141929,23.19047214083,55.8252976198005,63.0373567865265,36.097046459421,26.3011399117477,28.5655128806898,24.719424736741,13.8926258148344,22.2323699027785,7.19919773825119,1.97773272513395,5.6838409195688,11.3848041996994,18.4424786554346,16.1755795201225,16.0657066614712,14.302097371894,30.564655331207,36.2224407160646,18.2511290830282,21.6610764501214,33.0918763179608,15.4162233399144,19.9192247412893,21.3513081226178,24.3989632300859,23.4208367622169,21.8783615633839,24.2889209131201,14.069065250792,17.2662019987795,24.4541725943144,28.3319644790215,24.791126294765,38.2417276332579,22.9737542724628,66.3789679126842,18.9293252935905,11.5595126730318,3.2382191498269,5.19821133958135,15.2329141613094,12.2186645514624,10.5666799998396,8.57293815189467,5.3000936176551,21.9715734851622,8.98285341900225,7.64415719119937,7.11066703153331,11.0410430915719,9.88103475352884,12.1325866803548,11.418387971906,32.1082975722493,23.1569736941127,18.3894446372104,14.6143429589828,19.3717017695089,21.2518923179198,34.5710798978972,16.0853236901985,54.6300878692966,44.1028038605731,19.4614321428972,24.7503280419536,20.3174196983562,18.9101348722737,13.0474232852686,24.0080253549469,17.1746299587033,7.15279754584056,11.981512450592,4.79922184794726,8.89491589511453,20.5213175984607,16.0125210986519,15.7067940141081,17.9039049798045,18.1557974704535,19.3242881440391,20.766881672673,35.2364198922094,21.1491850037158,16.4269792981889,17.6771158944638,17.1758984710769,14.7137346837423,14.4049703844279,17.9338733224501,27.0104901630772,23.4448108121275,25.1120621820073,26.1290404446406,16.8143034487617,18.5323958564463,20.586281527182,18.4124415239163,16.4047877043103,25.074155989596,20.3724315043864,25.0783176191301,10.5331978096985,6.69104558498259,4.83077948972507,26.7192246570797,18.0585066185444,21.0672611909387,32.9075182463442,27.54699244463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| ||
|EntrezGene=233103 | |||
|HGNC= | |||
|UniProt=Q3UYG5,Q8C5X1 | |||
|association_with_transcript=0bp_to_ENSMUST00000108073,ENSMUST00000108074,ENSMUST00000132975,uc009gjb.1_5end | |||
|description=CAGE_peak_1_at_4931406P16Rik_5end | |||
|id=chr7:35098550..35098587,- | |||
|ontology_enrichment_celltype=CL:0000055!2.05e-07!50;CL:0000107!9.60e-07!9;CL:0000221!9.88e-07!44;CL:0000133!9.88e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.60e-07,9;CL:0000221,9.88e-07,44;CL:0000133,9.88e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.15e-09!333;UBERON:0000025!4.27e-09!114;UBERON:0004111!3.65e-08!122;UBERON:0004121!5.83e-08!102;UBERON:0000924!5.83e-08!102;UBERON:0006601!5.83e-08!102;UBERON:0002048!9.64e-08!14;UBERON:0000117!9.64e-08!14;UBERON:0000171!9.64e-08!14;UBERON:0000170!9.64e-08!14;UBERON:0005597!9.64e-08!14;UBERON:0000118!9.64e-08!14;UBERON:0003103!1.45e-07!43;UBERON:0004535!3.07e-07!23;UBERON:0001009!3.07e-07!23;UBERON:0007100!3.27e-07!18;UBERON:0000948!3.27e-07!18;UBERON:0005498!3.27e-07!18;UBERON:0004140!3.27e-07!18;UBERON:0009881!3.27e-07!18;UBERON:0004141!3.27e-07!18;UBERON:0003084!3.27e-07!18;UBERON:0007005!3.27e-07!18;UBERON:0004139!3.27e-07!18;UBERON:0004291!3.27e-07!18;UBERON:0000010!3.67e-07!11;UBERON:0004872!4.84e-07!33;UBERON:0005157!5.59e-07!27;UBERON:0000073!6.79e-07!75;UBERON:0001016!6.79e-07!75;UBERON:0002410!9.60e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.27e-09,114;UBERON:0010314,3.09e-08,92;UBERON:0004111,3.65e-08,122;UBERON:0005157,5.07e-08,20;UBERON:0004121,6.42e-08,95;UBERON:0000924,6.42e-08,95;UBERON:0006601,6.42e-08,95;UBERON:0002048,9.64e-08,14;UBERON:0000117,9.64e-08,14;UBERON:0000171,9.64e-08,14;UBERON:0000170,9.64e-08,14;UBERON:0005597,9.64e-08,14;UBERON:0000118,9.64e-08,14;UBERON:0003103,1.45e-07,43;UBERON:0004535,3.07e-07,23;UBERON:0001009,3.07e-07,23;UBERON:0007100,3.27e-07,18;UBERON:0000948,3.27e-07,18;UBERON:0005498,3.27e-07,18;UBERON:0004140,3.27e-07,18;UBERON:0009881,3.27e-07,18;UBERON:0004141,3.27e-07,18;UBERON:0003084,3.27e-07,18;UBERON:0007005,3.27e-07,18;UBERON:0004139,3.27e-07,18;UBERON:0004291,3.27e-07,18;UBERON:0000010,3.67e-07,11;UBERON:0004872,4.84e-07,33;UBERON:0001016,6.79e-07,75;UBERON:0002410,9.60e-07,9 | |||
|phase1_expression=12.6517589212787,2.79180326111489,3.63999391511629,3.62957053568196,3.00537437967808,5.20425742926858,5.84031601488814,4.51931632045517,10.13678799492,8.89445200023575,9.58820622062828,7.0199499915896,5.82082481766099,6.8187913886818,18.3210368998615,15.1856450542369,13.2916756844348,10.7257136221801,13.5743289269681,9.76096199135469,23.131774921091,6.25532992565577,5.74639536105658,6.07971206614945,2.98232065387321,1.72269589234506,3.4460959692726,4.30942465371778,4.3705386474966,2.77233142735924,2.66076612786366,8.89042942843484,11.0711661765223,0,3.17736781726402,2.65975432573588,2.85837098767317,7.95210098400125,2.3440060335714,3.66466620781659,3.52938892818609,4.09827290975067,7.76816564849846,15.485308610996,18.2478476195126,19.6395024812999,25.8189143634853,25.5089432965122,18.0142669842267,26.053606475954,27.2973522169457,25.8754615856949,15.268217151254,12.3311564141929,23.19047214083,55.8252976198005,63.0373567865265,36.097046459421,26.3011399117477,28.5655128806898,24.719424736741,13.8926258148344,22.2323699027785,7.19919773825119,1.97773272513395,5.6838409195688,11.3848041996994,18.4424786554346,16.1755795201225,16.0657066614712,14.302097371894,30.564655331207,36.2224407160646,18.2511290830282,21.6610764501214,33.0918763179608,15.4162233399144,19.9192247412893,21.3513081226178,24.3989632300859,23.4208367622169,21.8783615633839,24.2889209131201,14.069065250792,17.2662019987795,24.4541725943144,28.3319644790215,24.791126294765,38.2417276332579,22.9737542724628,66.3789679126842,18.9293252935905,11.5595126730318,3.2382191498269,5.19821133958135,15.2329141613094,12.2186645514624,10.5666799998396,8.57293815189467,5.3000936176551,21.9715734851622,8.98285341900225,7.64415719119937,7.11066703153331,11.0410430915719,9.88103475352884,12.1325866803548,11.418387971906,32.1082975722493,23.1569736941127,18.3894446372104,14.6143429589828,19.3717017695089,21.2518923179198,34.5710798978972,16.0853236901985,54.6300878692966,44.1028038605731,19.4614321428972,24.7503280419536,20.3174196983562,18.9101348722737,13.0474232852686,24.0080253549469,17.1746299587033,7.15279754584056,11.981512450592,4.79922184794726,8.89491589511453,20.5213175984607,16.0125210986519,15.7067940141081,17.9039049798045,18.1557974704535,19.3242881440391,20.766881672673,35.2364198922094,21.1491850037158,16.4269792981889,17.6771158944638,17.1758984710769,14.7137346837423,14.4049703844279,17.9338733224501,27.0104901630772,23.4448108121275,25.1120621820073,26.1290404446406,16.8143034487617,18.5323958564463,20.586281527182,18.4124415239163,16.4047877043103,25.074155989596,20.3724315043864,25.0783176191301,10.5331978096985,6.69104558498259,4.83077948972507,26.7192246570797,18.0585066185444,21.0672611909387,32.9075182463442,27.5469924446365,25.6083407393048,26.5088697015465,26.8273401399619,35.146368052518,30.1144525341669,31.5201531031863,33.724624771076,32.0177972461478,28.1024147572545,27.9149351021573,17.0334858336943,17.6995933292369,5.94753809370836,5.55346189993443,20.049095550312,19.9723537799977,24.3559501898756,16.9414160683608,20.2364019898832,14.0766963323294,7.11793592316767,15.9757986082291,15.834118154417,17.5081695396213,15.0122347081723,11.6846523125049,7.78096979548899,8.96135729644652,25.2258308267599,19.7649926814831,29.3040112750009,23.6235540300565,19.7831536910978,32.2624771495465,30.2903012825192,22.4367424928995,20.4098346193787,19.3733547357227,6.81841042300442,20.6887931087957,17.8868685553015,18.438693215558,21.7060329885698,23.8765388154893,12.9859184408524,17.2617682470486,23.9960135627052,10.4333337011471,15.814502718009,17.4906245404197,14.3537329632698,13.639259409144,13.0960111870996,13.0259750768109,51.9156464368159,17.2437184711141,31.289275476869,22.5760964081,31.6831835189478,54.7745461834738,57.3685174535293,62.4427673144956,63.9998685071135,58.023748687979,51.0255259703959,46.8649080087011,49.3879048136461,56.1238347296265,18.0949540727127,20.1245103012923,18.1952781017043,26.2139908989496,23.4403861382176,23.9111840648094,7.37707254195039,23.7322671572111,49.219282228936,48.4144042927832,44.8080667284222,53.2900419434191,51.2436950389506,52.9353112575117,49.791716306012,46.4686814078986,53.7591378007272,25.0630626809009,30.8009984901943,21.9020692510724,32.7402788300688,26.3952196756057,15.9294166007955,12.1390318077491,10.5813244937663,10.7504895460862,12.4026795009925,25.2096821314021,23.5169746783081,26.1744285223804,16.7553767840819,12.009396801561,6.32511651449993,13.4076206222643,16.3411010761818,13.8647042404109,10.2193360188376,15.2179294872431,24.2956120089915,23.9014215586775,22.2141177812863,20.7036165397928,29.0992917999001,69.480919243333,7.05690873775878,22.5894166529828,27.7718813916958,21.0492107999264,22.3226283285865,18.3837807714469,12.5336759750836,25.7741169794608,15.8909919142003,19.8131393244694,19.8158144285592,17.706634958441,16.266613098802,18.7598102029349,12.7483822495391,12.5956307091292,14.5109972494645,8.59203556213602,20.4036715859832,24.6016555223487,15.012742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| |||
|short_description=p1@4931406P16Rik | |||
}} |
Revision as of 13:22, 14 September 2013
Short description: | p1@4931406P16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_4931406P16Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000108073, ENSMUST00000108074, ENSMUST00000132975, uc009gjb.1_5end |
EntrezGene: | 4931406P16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.60e-07 | 9 |
ectodermal cell | 9.88e-07 | 44 |
neurectodermal cell | 9.88e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
tube | 4.27e-09 | 114 |
structure with developmental contribution from neural crest | 3.09e-08 | 92 |
anatomical conduit | 3.65e-08 | 122 |
epithelial fold | 5.07e-08 | 20 |
ectoderm-derived structure | 6.42e-08 | 95 |
ectoderm | 6.42e-08 | 95 |
presumptive ectoderm | 6.42e-08 | 95 |
lung | 9.64e-08 | 14 |
respiratory tube | 9.64e-08 | 14 |
respiration organ | 9.64e-08 | 14 |
pair of lungs | 9.64e-08 | 14 |
lung primordium | 9.64e-08 | 14 |
lung bud | 9.64e-08 | 14 |
compound organ | 1.45e-07 | 43 |
cardiovascular system | 3.07e-07 | 23 |
circulatory system | 3.07e-07 | 23 |
primary circulatory organ | 3.27e-07 | 18 |
heart | 3.27e-07 | 18 |
primitive heart tube | 3.27e-07 | 18 |
primary heart field | 3.27e-07 | 18 |
anterior lateral plate mesoderm | 3.27e-07 | 18 |
heart tube | 3.27e-07 | 18 |
heart primordium | 3.27e-07 | 18 |
cardiac mesoderm | 3.27e-07 | 18 |
cardiogenic plate | 3.27e-07 | 18 |
heart rudiment | 3.27e-07 | 18 |
peripheral nervous system | 3.67e-07 | 11 |
splanchnic layer of lateral plate mesoderm | 4.84e-07 | 33 |
nervous system | 6.79e-07 | 75 |
autonomic nervous system | 9.60e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.