FFCP PHASE1:Mm9::chr8:3754474..3754491,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:3754474..3754491,-|id=chr8:3754474..3754491,-|ontology_enrichment_celltype=CL:0000055!3.32e-17!50;CL:0002319!1.38e-16!43;CL:0000221!1.10e-15!44;CL:0000133!1.10e-15!44;CL:0000393!2.11e-14!39;CL:0000211!2.11e-14!39;CL:0000548!1.74e-13!115;CL:0000004!1.74e-13!115;CL:0000255!1.74e-13!115;CL:0000540!5.30e-13!33;CL:0000047!5.30e-13!33;CL:0000031!5.30e-13!33;CL:0000404!5.30e-13!33;CL:0002321!7.47e-13!70;CL:0000220!7.47e-13!70;CL:0000723!1.49e-12!91;CL:0000048!1.49e-12!91;CL:0002371!3.33e-12!118;CL:0000034!6.44e-12!97;CL:0000144!5.10e-11!121;CL:0000012!5.10e-11!121;CL:0000117!5.12e-08!23;CL:0000337!5.12e-08!23;CL:0000107!9.38e-08!9|ontology_enrichment_celltype_v019_2=CL:0002319,1.03e-22,43;CL:0000221,5.14e-22,44;CL:0000133,5.14e-22,44;CL:0002321,5.26e-19,70;CL:0000540,3.21e-18,33;CL:0000047,3.21e-18,33;CL:0000031,3.21e-18,33;CL:0000404,3.21e-18,33;CL:0000723,1.49e-17,91;CL:0000048,1.49e-17,91;CL:0000393,2.52e-17,39;CL:0000211,2.52e-17,39;CL:0000034,6.47e-17,97;CL:0000107,5.09e-16,9;CL:0000117,1.21e-07,23;CL:0000337,1.21e-07,23;CL:0002194,2.72e-07,4;CL:0000766,2.72e-07,4;CL:0000234,2.72e-07,4;CL:0000576,2.72e-07,4;CL:0000235,2.72e-07,4;CL:0000864,2.72e-07,4;CL:0002009,2.72e-07,4;CL:0000040,2.72e-07,4;CL:0000559,2.72e-07,4;CL:0002453,5.15e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.77e-15!73;UBERON:0005743!8.77e-15!73;UBERON:0000073!2.18e-14!75;UBERON:0001016!2.18e-14!75;UBERON:0002020!3.11e-09!34;UBERON:0004121!5.86e-08!102;UBERON:0000924!5.86e-08!102;UBERON:0006601!5.86e-08!102;UBERON:0002410!9.38e-08!9;UBERON:0000956!1.63e-07!21;UBERON:0001869!1.63e-07!21;UBERON:0000203!1.63e-07!21;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52;UBERON:0002619!3.36e-07!17;UBERON:0002791!5.29e-07!29;UBERON:0003528!5.29e-07!29;UBERON:0001893!5.29e-07!29;UBERON:0002616!6.94e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.29e-18,73;UBERON:0001016,1.28e-17,75;UBERON:0002410,5.09e-16,9;UBERON:0000010,1.12e-12,11;UBERON:0004121,6.40e-12,95;UBERON:0000924,6.40e-12,95;UBERON:0006601,6.40e-12,95;UBERON:0002020,1.68e-08,34;UBERON:0001948,4.61e-07,5;UBERON:0002315,4.61e-07,5;UBERON:0002021,8.17e-07,10;UBERON:0000411,8.17e-07,10;UBERON:0001950,8.17e-07,10|phase1_expression=0,0,0,0,1.00179145989269,0,0.467225281191051,0.774739940649458,0.140788722151667,0.468129052643987,0,0.159544317990673,0.171200729931206,0.174840804837995,0.999329285446988,0.202475267389826,2.79824751251259,0.315462165358238,0.274228867211478,0.84877930359606,0.340173160604279,0,0,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0,0,8.25539875497521,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,2.34717403304412,0.872100625521786,2.85592037554813,0.777719596297134,3.07970127575798,4.31257693094915,0,0.725362142011344,2.01656279485478,0.771778308107841,1.14613375975503,1.03134418455488,1.61853168687678,1.5869729378161,0,1.69422266034566,0.889294796111139,2.2497492932035,6.92206453796882,9.2362414942993,3.89480143673926,1.92109152660777,1.24427534770173,0.810035629990144,1.05162480675691,1.42825492201902,1.10434270475807,0.734944795289724,0.670918297127655,0.919218786610021,3.30347642998166,0.766124028511126,1.22885226604995,1.18697658957174,0.365950574409639,2.08365348222704,0.558365998002762,0,0.916789486660861,2.35702868378934,2.27794689278565,1.3047961207771,0.151452386666368,0.151143120213571,0,0,1.3599426674155,3.2382191498269,11.695975514058,0.448026887097336,0.140444420131752,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,1.01104889002957,0.79928715803342,0,0.148442139064825,0.520455980298408,0.608930956624282,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,1.45462575940567,0,0.292780797011547,0.628340120440365,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.205809224758569,0.660837565967596,0,0,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0.198956472041151,0,2.69645822596266,0,0.398282546508734,0.189667900953082,0,1.1270773567308,1.01825663922657,0,0.280543279561274,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,2.87536413054709,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.16296497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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:3754474..3754491,- | |||
|id=chr8:3754474..3754491,- | |||
|ontology_enrichment_celltype=CL:0000055!3.32e-17!50;CL:0002319!1.38e-16!43;CL:0000221!1.10e-15!44;CL:0000133!1.10e-15!44;CL:0000393!2.11e-14!39;CL:0000211!2.11e-14!39;CL:0000548!1.74e-13!115;CL:0000004!1.74e-13!115;CL:0000255!1.74e-13!115;CL:0000540!5.30e-13!33;CL:0000047!5.30e-13!33;CL:0000031!5.30e-13!33;CL:0000404!5.30e-13!33;CL:0002321!7.47e-13!70;CL:0000220!7.47e-13!70;CL:0000723!1.49e-12!91;CL:0000048!1.49e-12!91;CL:0002371!3.33e-12!118;CL:0000034!6.44e-12!97;CL:0000144!5.10e-11!121;CL:0000012!5.10e-11!121;CL:0000117!5.12e-08!23;CL:0000337!5.12e-08!23;CL:0000107!9.38e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.03e-22,43;CL:0000221,5.14e-22,44;CL:0000133,5.14e-22,44;CL:0002321,5.26e-19,70;CL:0000540,3.21e-18,33;CL:0000047,3.21e-18,33;CL:0000031,3.21e-18,33;CL:0000404,3.21e-18,33;CL:0000723,1.49e-17,91;CL:0000048,1.49e-17,91;CL:0000393,2.52e-17,39;CL:0000211,2.52e-17,39;CL:0000034,6.47e-17,97;CL:0000107,5.09e-16,9;CL:0000117,1.21e-07,23;CL:0000337,1.21e-07,23;CL:0002194,2.72e-07,4;CL:0000766,2.72e-07,4;CL:0000234,2.72e-07,4;CL:0000576,2.72e-07,4;CL:0000235,2.72e-07,4;CL:0000864,2.72e-07,4;CL:0002009,2.72e-07,4;CL:0000040,2.72e-07,4;CL:0000559,2.72e-07,4;CL:0002453,5.15e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.77e-15!73;UBERON:0005743!8.77e-15!73;UBERON:0000073!2.18e-14!75;UBERON:0001016!2.18e-14!75;UBERON:0002020!3.11e-09!34;UBERON:0004121!5.86e-08!102;UBERON:0000924!5.86e-08!102;UBERON:0006601!5.86e-08!102;UBERON:0002410!9.38e-08!9;UBERON:0000956!1.63e-07!21;UBERON:0001869!1.63e-07!21;UBERON:0000203!1.63e-07!21;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52;UBERON:0002619!3.36e-07!17;UBERON:0002791!5.29e-07!29;UBERON:0003528!5.29e-07!29;UBERON:0001893!5.29e-07!29;UBERON:0002616!6.94e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.29e-18,73;UBERON:0001016,1.28e-17,75;UBERON:0002410,5.09e-16,9;UBERON:0000010,1.12e-12,11;UBERON:0004121,6.40e-12,95;UBERON:0000924,6.40e-12,95;UBERON:0006601,6.40e-12,95;UBERON:0002020,1.68e-08,34;UBERON:0001948,4.61e-07,5;UBERON:0002315,4.61e-07,5;UBERON:0002021,8.17e-07,10;UBERON:0000411,8.17e-07,10;UBERON:0001950,8.17e-07,10 | |||
|phase1_expression=0,0,0,0,1.00179145989269,0,0.467225281191051,0.774739940649458,0.140788722151667,0.468129052643987,0,0.159544317990673,0.171200729931206,0.174840804837995,0.999329285446988,0.202475267389826,2.79824751251259,0.315462165358238,0.274228867211478,0.84877930359606,0.340173160604279,0,0,0.47997726838022,0.68822784320151,0,0,0,0.190023419456374,0,0,8.25539875497521,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.550640256485045,2.34717403304412,0.872100625521786,2.85592037554813,0.777719596297134,3.07970127575798,4.31257693094915,0,0.725362142011344,2.01656279485478,0.771778308107841,1.14613375975503,1.03134418455488,1.61853168687678,1.5869729378161,0,1.69422266034566,0.889294796111139,2.2497492932035,6.92206453796882,9.2362414942993,3.89480143673926,1.92109152660777,1.24427534770173,0.810035629990144,1.05162480675691,1.42825492201902,1.10434270475807,0.734944795289724,0.670918297127655,0.919218786610021,3.30347642998166,0.766124028511126,1.22885226604995,1.18697658957174,0.365950574409639,2.08365348222704,0.558365998002762,0,0.916789486660861,2.35702868378934,2.27794689278565,1.3047961207771,0.151452386666368,0.151143120213571,0,0,1.3599426674155,3.2382191498269,11.695975514058,0.448026887097336,0.140444420131752,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0.760079596425296,1.01104889002957,0.79928715803342,0,0.148442139064825,0.520455980298408,0.608930956624282,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,1.45462575940567,0,0.292780797011547,0.628340120440365,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.351902248327898,0,0,0.348252166522167,0.411564272815887,0,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0,0.292399974850665,0.219550115291051,0,0.210289948564127,0.205809224758569,0.660837565967596,0,0,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0,0.251335208800269,0.198956472041151,0,2.69645822596266,0,0.398282546508734,0.189667900953082,0,1.1270773567308,1.01825663922657,0,0.280543279561274,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,2.87536413054709,0,0.312037673114561,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0,0,0.318909537314974,0.491589944147214,0,0,7.53956419696361,4.89515115436839,0,0.551873492609465,0.160550589987792,0,0,0.252470927204373,11.3582958989852,11.7131623288992,6.89354872744957,8.84184552424442,5.12436950389506,8.77537245445381,9.71545684019746,4.38383786866968,4.34816555741176,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0.291480836629851,0,0.683483523191411,0,0.185194527369712,1.31857919903284,0.546776910884101,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.330613822901344,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.104859344425711,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0,0.358053391334963,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0.705783295957884,0.194915761479505,0.192423683280659,0,0,0.221985953374065,1.52513556236109,0.671538465456314,0,0,0,0.214368379079066,0,2.82375921308533,2.76195141904306,4.01026859407578,2.40594455281163,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,0,0,0.341467211508268,0.486213434136588,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.282328141245992,0,0,0,0,0,0.118635018124174,0,0,0.464810523557898,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr8:3754474..3754491,- | |||
}} |
Revision as of 15:35, 14 September 2013
Short description: | p@chr8:3754474..3754491, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:3754474..3754491, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.03e-22 | 43 |
ectodermal cell | 5.14e-22 | 44 |
neurectodermal cell | 5.14e-22 | 44 |
embryonic cell | 5.26e-19 | 70 |
neuron | 3.21e-18 | 33 |
neuronal stem cell | 3.21e-18 | 33 |
neuroblast | 3.21e-18 | 33 |
electrically signaling cell | 3.21e-18 | 33 |
somatic stem cell | 1.49e-17 | 91 |
multi fate stem cell | 1.49e-17 | 91 |
electrically responsive cell | 2.52e-17 | 39 |
electrically active cell | 2.52e-17 | 39 |
stem cell | 6.47e-17 | 97 |
autonomic neuron | 5.09e-16 | 9 |
CNS neuron (sensu Vertebrata) | 1.21e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-07 | 23 |
monopoietic cell | 2.72e-07 | 4 |
myeloid leukocyte | 2.72e-07 | 4 |
phagocyte | 2.72e-07 | 4 |
monocyte | 2.72e-07 | 4 |
macrophage | 2.72e-07 | 4 |
tissue-resident macrophage | 2.72e-07 | 4 |
macrophage dendritic cell progenitor | 2.72e-07 | 4 |
monoblast | 2.72e-07 | 4 |
promonocyte | 2.72e-07 | 4 |
oligodendrocyte precursor cell | 5.15e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.29e-18 | 73 |
nervous system | 1.28e-17 | 75 |
autonomic nervous system | 5.09e-16 | 9 |
peripheral nervous system | 1.12e-12 | 11 |
ectoderm-derived structure | 6.40e-12 | 95 |
ectoderm | 6.40e-12 | 95 |
presumptive ectoderm | 6.40e-12 | 95 |
gray matter | 1.68e-08 | 34 |
regional part of spinal cord | 4.61e-07 | 5 |
gray matter of spinal cord | 4.61e-07 | 5 |
occipital lobe | 8.17e-07 | 10 |
visual cortex | 8.17e-07 | 10 |
neocortex | 8.17e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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