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{{Coexpression_clusters
{
|coexpression_dpi_cluster_scores_median=0,0,0,

Latest revision as of 10:17, 17 September 2013


Full id: C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix



Phase1 CAGE Peaks

Hg19::chr10:112115232..112115242,+p@chr10:112115232..112115242
+
Hg19::chr10:126301344..126301355,+p11@LHPP
Hg19::chr10:49880475..49880487,-p1@ENST00000440750
Hg19::chr10:63660172..63660177,-p@chr10:63660172..63660177
-
Hg19::chr10:63661750..63661755,+p@chr10:63661750..63661755
+
Hg19::chr10:94451574..94451587,+p6@HHEX
Hg19::chr10:97501785..97501801,+p9@ENTPD1
Hg19::chr10:98460572..98460581,-p12@PIK3AP1
Hg19::chr11:113848250..113848255,+p5@HTR3A
Hg19::chr11:118754576..118754585,+p4@CXCR5
Hg19::chr11:129992134..129992148,+p@chr11:129992134..129992148
+
Hg19::chr11:2405833..2405863,+p7@CD81
Hg19::chr11:45954806..45954817,-p22@PHF21A
Hg19::chr11:45954897..45954905,-p20@PHF21A
Hg19::chr11:58869776..58869807,-p@chr11:58869776..58869807
-
Hg19::chr11:60223312..60223353,+p1@MS4A1
Hg19::chr11:60233576..60233586,+p4@MS4A1
Hg19::chr11:61124250..61124257,-p11@CYBASC3
Hg19::chr11:65407284..65407293,+p18@SIPA1
Hg19::chr11:67770366..67770404,+p@chr11:67770366..67770404
+
Hg19::chr11:71752221..71752232,-p14@NUMA1
Hg19::chr11:73692949..73692958,+p@chr11:73692949..73692958
+
Hg19::chr11:82774371..82774374,-p@chr11:82774371..82774374
-
Hg19::chr12:103835345..103835379,-p1@C12orf42
Hg19::chr12:103835413..103835445,-p2@C12orf42
Hg19::chr12:109029618..109029632,+p1@ENST00000547282
Hg19::chr12:111078120..111078129,+p9@TCTN1
Hg19::chr12:111078151..111078169,+p8@TCTN1
Hg19::chr12:111078173..111078186,+p7@TCTN1
Hg19::chr12:111126910..111126949,-p1@HVCN1
Hg19::chr12:111127551..111127618,-p2@HVCN1
Hg19::chr12:132555836..132555842,+p@chr12:132555836..132555842
+
Hg19::chr12:14518598..14518627,+p1@ATF7IP
Hg19::chr12:26274917..26274929,+p5@SSPN
Hg19::chr12:26274939..26274946,+p15@SSPN
Hg19::chr12:32031834..32031838,-p@chr12:32031834..32031838
-
Hg19::chr12:32040123..32040161,-p1@ENST00000535163
Hg19::chr12:32040185..32040200,-p2@ENST00000535163
Hg19::chr12:51318431..51318459,+p3@METTL7A
Hg19::chr12:51318464..51318492,+p2@METTL7A
Hg19::chr12:51318499..51318511,+p5@METTL7A
Hg19::chr12:72080171..72080193,+p4@TMEM19
Hg19::chr12:90321492..90321497,+p@chr12:90321492..90321497
+
Hg19::chr12:92860457..92860483,+p2@uc001tcg.1
Hg19::chr12:92860585..92860604,+p1@uc001tcg.1
Hg19::chr12:92861820..92861854,-p@chr12:92861820..92861854
-
Hg19::chr12:93096733..93096750,+p2@C12orf74
Hg19::chr12:93096759..93096770,+p1@C12orf74
Hg19::chr12:93335118..93335125,+p@chr12:93335118..93335125
+
Hg19::chr12:9801021..9801040,+p9@LOC374443
Hg19::chr12:9801099..9801138,+p5@LOC374443
Hg19::chr13:115027352..115027359,+p@chr13:115027352..115027359
+
Hg19::chr14:105953215..105953234,+p3@CRIP1
Hg19::chr14:105953246..105953256,+p6@CRIP1
Hg19::chr14:106177058..106177070,-p1@BC098451
Hg19::chr14:106320578..106320592,-p5@IGHM
Hg19::chr14:106320631..106320646,-p9@IGHM
Hg19::chr14:106324410..106324421,-p@chr14:106324410..106324421
-
Hg19::chr14:106326958..106326970,-p@chr14:106326958..106326970
-
Hg19::chr14:106327543..106327574,-p5@DQ431661
Hg19::chr14:106328169..106328244,-p1@IGHM
Hg19::chr14:106328338..106328349,-p3@IGHM
Hg19::chr14:106351348..106351372,-p@chr14:106351348..106351372
-
Hg19::chr14:106352840..106352888,-p@chr14:106352840..106352888
-
Hg19::chr14:106371329..106371353,-p1@IGHD
Hg19::chr14:107013429..107013434,-p3@IGHV3-49
Hg19::chr14:22959438..22959459,+p2@TRAJ48
Hg19::chr14:50571781..50571823,-p@chr14:50571781..50571823
-
Hg19::chr14:53190525..53190534,+p4@PSMC6
Hg19::chr14:53190537..53190545,+p3@PSMC6
Hg19::chr14:65785456..65785467,-p3@ENST00000553754
Hg19::chr14:65785469..65785486,-p2@ENST00000553754
Hg19::chr14:65785502..65785529,-p1@ENST00000553754
Hg19::chr14:69262947..69262986,-p3@ZFP36L1
Hg19::chr14:96118411..96118425,+p@chr14:96118411..96118425
+
Hg19::chr14:96131115..96131131,+p2@TCL6
Hg19::chr14:96131144..96131159,+p1@TCL6
Hg19::chr14:96178667..96178678,-p2@TCL1A
Hg19::chr14:96180451..96180468,-p1@TCL1A
Hg19::chr14:96181767..96181778,+p2@ENST00000556386
Hg19::chr15:57592185..57592201,+p1@LOC283663
Hg19::chr15:64443905..64443943,+p1@SNX22
Hg19::chr15:81585055..81585070,+p12@IL16
Hg19::chr15:81585088..81585114,+p4@IL16
Hg19::chr15:85873537..85873558,-p1@ENST00000558365
Hg19::chr15:90735145..90735166,+p4@SEMA4B
Hg19::chr16:10972530..10972563,+p@chr16:10972530..10972563
+
Hg19::chr16:10982303..10982318,-p@chr16:10982303..10982318
-
Hg19::chr16:12058961..12058966,+p5@TNFRSF17
Hg19::chr16:15733143..15733164,-p13@KIAA0430
Hg19::chr16:15736417..15736433,-p5@KIAA0430
Hg19::chr16:15736446..15736485,-p3@KIAA0430
Hg19::chr16:19222512..19222531,+p@chr16:19222512..19222531
+
Hg19::chr16:24046710..24046754,+p@chr16:24046710..24046754
+
Hg19::chr16:28936007..28936037,-p@chr16:28936007..28936037
-
Hg19::chr16:28943267..28943316,+p1@CD19
Hg19::chr16:28943323..28943354,+p2@CD19
Hg19::chr16:68071924..68071973,+p3@DUS2L
Hg19::chr16:78784165..78784168,+p@chr16:78784165..78784168
+
Hg19::chr16:85969774..85969786,-p@chr16:85969774..85969786
-
Hg19::chr17:29297530..29297547,+p2@RNF135
Hg19::chr17:3599396..3599410,-p2@P2RX5
Hg19::chr17:47824582..47824596,-p4@FAM117A
Hg19::chr17:48226088..48226106,+p@chr17:48226088..48226106
+
Hg19::chr17:5322479..5322499,+p3@RPAIN
Hg19::chr17:5322512..5322530,+p6@RPAIN
Hg19::chr17:62009667..62009701,-p1@CD79B
Hg19::chr17:62009702..62009717,-p2@CD79B
Hg19::chr18:56325763..56325774,+p@chr18:56325763..56325774
+
Hg19::chr18:56631315..56631351,+p@chr18:56631315..56631351
+
Hg19::chr18:77220664..77220696,+p@chr18:77220664..77220696
+
Hg19::chr19:10978801..10978827,+p@chr19:10978801..10978827
+
Hg19::chr19:13213704..13213726,-p3@LYL1
Hg19::chr19:14693888..14693955,+p1@CLEC17A
Hg19::chr19:14722206..14722210,+p@chr19:14722206..14722210
+
Hg19::chr19:16493901..16493905,+p@chr19:16493901..16493905
+
Hg19::chr19:17638041..17638055,+p2@FAM129C
Hg19::chr19:17638059..17638105,+p1@FAM129C
Hg19::chr19:18209729..18209742,-p3@IL12RB1
Hg19::chr19:35697629..35697638,+p@chr19:35697629..35697638
+
Hg19::chr19:35820064..35820097,+p1@CD22
Hg19::chr19:42041537..42041547,+p4@CEACAM21
Hg19::chr19:42381337..42381360,+p1@CD79A
Hg19::chr19:42383282..42383313,+p@chr19:42383282..42383313
+
Hg19::chr19:42384975..42384986,+p4@CD79A
Hg19::chr19:42385114..42385126,+p@chr19:42385114..42385126
+
Hg19::chr19:42385139..42385152,+p@chr19:42385139..42385152
+
Hg19::chr19:44287112..44287154,-p@chr19:44287112..44287154
-
Hg19::chr19:45555338..45555350,+p@chr19:45555338..45555350
+
Hg19::chr19:49838656..49838736,+p1@CD37
Hg19::chr19:50922187..50922204,+p1@SPIB
Hg19::chr19:50923046..50923094,+p@chr19:50923046..50923094
+
Hg19::chr19:52053011..52053020,+p@chr19:52053011..52053020
+
Hg19::chr19:52053039..52053062,+p@chr19:52053039..52053062
+
Hg19::chr19:52053067..52053076,+p@chr19:52053067..52053076
+
Hg19::chr19:52104632..52104651,+p@chr19:52104632..52104651
+
Hg19::chr19:7413939..7413952,+p@chr19:7413939..7413952
+
Hg19::chr19:7414003..7414015,+p@chr19:7414003..7414015
+
Hg19::chr19:7755436..7755447,-p@chr19:7755436..7755447
-
Hg19::chr19:7766958..7766972,-p3@FCER2
Hg19::chr19:7766987..7766989,-p16@FCER2
Hg19::chr19:7766991..7767038,-p1@FCER2
Hg19::chr1:108506968..108506995,+p1@ENST00000438318
Hg19::chr1:111413791..111413841,+p3@CD53
Hg19::chr1:14027109..14027147,-p@chr1:14027109..14027147
-
Hg19::chr1:14027926..14027933,-p@chr1:14027926..14027933
-
Hg19::chr1:14057463..14057496,+p4@PRDM2
Hg19::chr1:151300160..151300196,-p3@PI4KB
Hg19::chr1:157670333..157670347,-p7@FCRL3
Hg19::chr1:157670355..157670367,-p8@FCRL3
Hg19::chr1:157670380..157670392,-p6@FCRL3
Hg19::chr1:157670537..157670568,-p1@FCRL3
Hg19::chr1:157746914..157746929,-p1@FCRL2
Hg19::chr1:157779174..157779185,-p@chr1:157779174..157779185
-
Hg19::chr1:157789861..157789887,-p1@FCRL1
Hg19::chr1:157789903..157789919,-p2@FCRL1
Hg19::chr1:157790244..157790248,-p3@FCRL1
Hg19::chr1:158259558..158259570,+p4@CD1C
Hg19::chr1:161677012..161677027,+p1@FCRLA
Hg19::chr1:161677036..161677047,+p2@FCRLA
Hg19::chr1:167598947..167598951,-p@chr1:167598947..167598951
-
Hg19::chr1:167599346..167599361,-p@chr1:167599346..167599361
-
Hg19::chr1:178511876..178511946,+p1@C1orf220
Hg19::chr1:178694362..178694400,+p1@RALGPS2
Hg19::chr1:178694408..178694442,+p2@RALGPS2
Hg19::chr1:178697552..178697555,+p@chr1:178697552..178697555
+
Hg19::chr1:178825560..178825565,+p@chr1:178825560..178825565
+
Hg19::chr1:198567966..198567999,-p1@ENST00000429469
Hg19::chr1:207095275..207095278,-p4@FAIM3
Hg19::chr1:220943806..220943817,+p@chr1:220943806..220943817
+
Hg19::chr1:221220469..221220478,+p@chr1:221220469..221220478
+
Hg19::chr1:222910538..222910572,+p2@FAM177B
Hg19::chr1:226309754..226309786,+p@chr1:226309754..226309786
+
Hg19::chr1:241695549..241695560,+p4@KMO
Hg19::chr1:24239844..24239858,-p1@CNR2
Hg19::chr1:2427900..2427911,+p@chr1:2427900..2427911
+
Hg19::chr1:31225180..31225207,-p@chr1:31225180..31225207
-
Hg19::chr1:40847466..40847481,+p@chr1:40847466..40847481
+
Hg19::chr1:81106951..81107001,+p1@ENST00000443565
Hg19::chr1:85741577..85741590,+p3@LOC646626
Hg19::chr20:31996962..31996997,-p@chr20:31996962..31996997
-
Hg19::chr20:46988646..46988664,+p1@LINC00494
Hg19::chr21:45626503..45626506,-p@chr21:45626503..45626506
-
Hg19::chr21:45627285..45627294,-p2@ENST00000423967
Hg19::chr21:45661428..45661492,+p@chr21:45661428..45661492
+
Hg19::chr21:45663850..45663868,-p@chr21:45663850..45663868
-
Hg19::chr22:22385335..22385377,+p1@IGLV4-69
Hg19::chr22:22453093..22453106,+p2@IGLV8-61
Hg19::chr22:22453119..22453135,+p1@IGLV8-61
Hg19::chr22:22673051..22673061,+p1@IGLV5-52
Hg19::chr22:22697537..22697541,+p1@IGLV9-49
Hg19::chr22:22707260..22707265,+p1@IGLV5-48
Hg19::chr22:22758537..22758542,+p1@IGLV1-41
Hg19::chr22:23089870..23089875,+p1@IGLV3-16
Hg19::chr22:23260324..23260332,+p@chr22:23260324..23260332
+
Hg19::chr22:24096562..24096619,-p1@VPREB3
Hg19::chr22:24096630..24096641,-p2@VPREB3
Hg19::chr22:33617765..33617772,-p2@ENST00000421232
Hg19::chr22:39462328..39462341,+p@chr22:39462328..39462341
+
Hg19::chr22:42320951..42320952,-p@chr22:42320951..42320952
-
Hg19::chr22:44576794..44576850,+p4@PARVG
Hg19::chr2:100758991..100759009,-p3@AFF3
Hg19::chr2:100759010..100759035,-p1@AFF3
Hg19::chr2:100759037..100759058,-p2@AFF3
Hg19::chr2:100759060..100759073,-p8@AFF3
Hg19::chr2:100759076..100759088,-p10@AFF3
Hg19::chr2:106366695..106366702,-p@chr2:106366695..106366702
-
Hg19::chr2:128397711..128397730,-p10@LIMS2
Hg19::chr2:135011615..135011625,+p11@MGAT5
Hg19::chr2:135011666..135011677,+p9@MGAT5
Hg19::chr2:165617893..165617932,-p@chr2:165617893..165617932
-
Hg19::chr2:165811849..165811866,-p3@SLC38A11
Hg19::chr2:172182856..172182905,-p4@METTL8
Hg19::chr2:17934493..17934510,+p@chr2:17934493..17934510
+
Hg19::chr2:17934537..17934551,+p@chr2:17934537..17934551
+
Hg19::chr2:183582774..183582807,+p6@DNAJC10
Hg19::chr2:224815566..224815579,+p@chr2:224815566..224815579
+
Hg19::chr2:227771444..227771457,+p3@RHBDD1
Hg19::chr2:231313038..231313049,+p@chr2:231313038..231313049
+
Hg19::chr2:232258477..232258517,+p1@ENST00000454416
Hg19::chr2:232536534..232536561,-p@chr2:232536534..232536561
-
Hg19::chr2:232536651..232536664,+p@chr2:232536651..232536664
+
Hg19::chr2:60779843..60779855,-p@chr2:60779843..60779855
-
Hg19::chr2:68962505..68962521,+p13@ARHGAP25
Hg19::chr2:88926442..88926514,+p@chr2:88926442..88926514
+
Hg19::chr2:89155111..89155122,-p@chr2:89155111..89155122
-
Hg19::chr2:89156674..89156682,+p6@CU688247
p6@CU689025
p6@CU689831
p6@CU689833
p6@CU689835
p6@CU691143
Hg19::chr2:89158929..89158932,-p@chr2:89158929..89158932
-
Hg19::chr2:89184868..89184885,+p1@IGKV4-1
Hg19::chr2:89196746..89196778,+p1@IGKV5-2
Hg19::chr2:89292422..89292430,-p1@IGKV1-8
Hg19::chr2:89952853..89952862,+p1@IGKV1D-33
Hg19::chr2:89986318..89986323,+p1@IGKV2D-29
Hg19::chr2:90121629..90121635,+p1@IGKV1D-17
Hg19::chr2:90139056..90139085,+p1@IGKV1D-16
Hg19::chr3:107844539..107844555,-p@chr3:107844539..107844555
-
Hg19::chr3:107844568..107844579,-p@chr3:107844568..107844579
-
Hg19::chr3:107938309..107938325,-p5@IFT57
Hg19::chr3:107938341..107938354,-p9@IFT57
Hg19::chr3:107938378..107938392,-p7@IFT57
Hg19::chr3:107938399..107938414,-p6@IFT57
Hg19::chr3:112178705..112178716,-p@chr3:112178705..112178716
-
Hg19::chr3:112178720..112178767,-p@chr3:112178720..112178767
-
Hg19::chr3:112218257..112218268,-p4@BTLA
Hg19::chr3:112218278..112218292,-p5@BTLA
Hg19::chr3:112218304..112218325,-p1@BTLA
Hg19::chr3:112218378..112218418,-p2@BTLA
Hg19::chr3:112218437..112218447,-p6@BTLA
Hg19::chr3:112218461..112218478,-p3@BTLA
Hg19::chr3:113730065..113730093,-p@chr3:113730065..113730093
-
Hg19::chr3:121554046..121554091,+p1@EAF2
Hg19::chr3:13064047..13064096,-p@chr3:13064047..13064096
-
Hg19::chr3:186714283..186714307,+p8@ST6GAL1
Hg19::chr3:186783358..186783385,+p@chr3:186783358..186783385
+
Hg19::chr3:19389327..19389339,+p4@KCNH8
Hg19::chr3:32022848..32022873,-p3@OSBPL10
Hg19::chr3:32023114..32023135,-p2@OSBPL10
Hg19::chr3:32023232..32023273,+p1@ZNF860
Hg19::chr3:34242347..34242381,+p@chr3:34242347..34242381
+
Hg19::chr3:40665374..40665401,+p@chr3:40665374..40665401
+
Hg19::chr3:45637869..45637880,-p@chr3:45637869..45637880
-
Hg19::chr3:45935688..45935714,+p@chr3:45935688..45935714
+
Hg19::chr3:58340058..58340075,-p@chr3:58340058..58340075
-
Hg19::chr3:71409904..71409927,-p46@FOXP1
Hg19::chr3:71630844..71630862,-p40@FOXP1
Hg19::chr4:102711802..102711843,+p2@BANK1
Hg19::chr4:102711874..102711898,+p1@BANK1
Hg19::chr4:102711912..102711934,+p5@BANK1
Hg19::chr4:102711936..102711947,+p6@BANK1
Hg19::chr4:102711977..102711978,+p9@BANK1
Hg19::chr4:102734967..102735022,+p3@BANK1
Hg19::chr4:102735026..102735056,+p4@BANK1
Hg19::chr4:102879640..102879645,+p@chr4:102879640..102879645
+
Hg19::chr4:16228083..16228108,-p1@TAPT1
Hg19::chr4:164534145..164534178,-p4@MARCH1
Hg19::chr4:26994342..26994358,-p@chr4:26994342..26994358
-
Hg19::chr4:3043409..3043417,+p@chr4:3043409..3043417
+
Hg19::chr4:39640700..39640712,-p8@C4orf34
Hg19::chr4:40198602..40198614,+p3@RHOH
Hg19::chr4:68424434..68424453,+p1@STAP1
Hg19::chr4:68424462..68424469,+p3@STAP1
Hg19::chr4:68424473..68424497,+p2@STAP1
Hg19::chr4:68456482..68456485,+p@chr4:68456482..68456485
+
Hg19::chr5:111857189..111857217,+p1@ENST00000541361
Hg19::chr5:122037691..122037728,-p@chr5:122037691..122037728
-
Hg19::chr5:122111045..122111064,+p4@SNX2
Hg19::chr5:132439186..132439209,+p13@HSPA4
Hg19::chr5:14168764..14168781,+p@chr5:14168764..14168781
+
Hg19::chr5:56111040..56111056,-p@chr5:56111040..56111056
-
Hg19::chr5:56111155..56111166,+p10@MAP3K1
Hg19::chr5:77409668..77409707,-p4@AP3B1
Hg19::chr5:88646789..88646794,+p@chr5:88646789..88646794
+
Hg19::chr5:96409425..96409436,+p@chr5:96409425..96409436
+
Hg19::chr6:107097003..107097023,+p@chr6:107097003..107097023
+
Hg19::chr6:128562429..128562459,-p3@PTPRK
Hg19::chr6:128562461..128562487,-p5@PTPRK
Hg19::chr6:136611744..136611772,-p@chr6:136611744..136611772
-
Hg19::chr6:139592467..139592482,+p2@ENST00000441249
Hg19::chr6:139592484..139592503,+p1@ENST00000441249
Hg19::chr6:150954094..150954119,+p@chr6:150954094..150954119
+
Hg19::chr6:159528034..159528048,+p@chr6:159528034..159528048
+
Hg19::chr6:167536537..167536608,+p4@CCR6
Hg19::chr6:167539117..167539121,-p@chr6:167539117..167539121
-
Hg19::chr6:24936851..24936874,-p@chr6:24936851..24936874
-
Hg19::chr6:24949610..24949620,+p@chr6:24949610..24949620
+
Hg19::chr6:2881829..2881867,-p@chr6:2881829..2881867
-
Hg19::chr6:32407411..32407431,-p@chr6:32407411..32407431
-
Hg19::chr6:32557773..32557796,+p@chr6:32557773..32557796
+
Hg19::chr6:32572305..32572317,-p@chr6:32572305..32572317
-
Hg19::chr6:32575596..32575598,-p@chr6:32575596..32575598
-
Hg19::chr6:32590879..32590905,-p@chr6:32590879..32590905
-
Hg19::chr6:32595760..32595805,-p@chr6:32595760..32595805
-
Hg19::chr6:32658073..32658091,-p@chr6:32658073..32658091
-
Hg19::chr6:32784768..32784839,-p1@HLA-DOB
Hg19::chr6:32784847..32784854,-p2@HLA-DOB
Hg19::chr6:32907816..32907820,-p@chr6:32907816..32907820
-
Hg19::chr6:32986728..32986743,-p@chr6:32986728..32986743
-
Hg19::chr6:33025326..33025346,+p@chr6:33025326..33025346
+
Hg19::chr6:33041560..33041585,+p@chr6:33041560..33041585
+
Hg19::chr6:33041595..33041611,+p@chr6:33041595..33041611
+
Hg19::chr6:36725157..36725188,-p2@CPNE5
Hg19::chr6:70577199..70577222,+p4@COL19A1
Hg19::chr6:89324022..89324033,-p@chr6:89324022..89324033
-
Hg19::chr6:91006518..91006570,-p1@BACH2
Hg19::chr7:120778561..120778576,-p@chr7:120778561..120778576
-
Hg19::chr7:120970624..120970651,-p@chr7:120970624..120970651
-
Hg19::chr7:127569199..127569218,+p@chr7:127569199..127569218
+
Hg19::chr7:18330035..18330050,+p13@HDAC9
Hg19::chr7:22701524..22701535,-p2@ENST00000442252
Hg19::chr7:22767228..22767258,-p1@ENST00000325042
p1@uc010kun.1
Hg19::chr7:33140498..33140517,-p3@RP9
Hg19::chr7:69289551..69289564,+p20@AUTS2
Hg19::chr7:69289580..69289610,+p6@AUTS2
Hg19::chr7:77469439..77469459,+p6@PHTF2
Hg19::chr7:87105337..87105344,-p3@ABCB4
Hg19::chr7:98528338..98528356,+p@chr7:98528338..98528356
+
Hg19::chr7:99797848..99797861,+p6@STAG3
Hg19::chr8:110535068..110535088,+p3@PKHD1L1
Hg19::chr8:11350850..11350859,+p@chr8:11350850..11350859
+
Hg19::chr8:11351494..11351511,+p6@BLK
Hg19::chr8:11351533..11351546,+p7@BLK
Hg19::chr8:11351852..11351874,+p5@BLK
Hg19::chr8:11351876..11351902,+p2@BLK
Hg19::chr8:11351905..11351925,+p1@BLK
Hg19::chr8:11351926..11351945,+p4@BLK
Hg19::chr8:11396776..11396795,+p@chr8:11396776..11396795
+
Hg19::chr8:11403533..11403544,+p8@BLK
Hg19::chr8:11403548..11403584,+p3@BLK
Hg19::chr8:134511656..134511679,-p7@ST3GAL1
Hg19::chr8:22397238..22397264,+p@chr8:22397238..22397264
+
Hg19::chr8:24151620..24151647,+p3@ADAM28
Hg19::chr8:24151652..24151664,+p5@ADAM28
Hg19::chr8:24182486..24182532,+p6@ADAM28
Hg19::chr8:24244842..24244865,-p1@ENST00000523700
Hg19::chr8:27243786..27243798,+p@chr8:27243786..27243798
+
Hg19::chr8:28196157..28196204,+p2@PNOC
Hg19::chr8:28196780..28196834,-p1@ENST00000521731
Hg19::chr8:53207024..53207045,+p1@ENST00000522228
Hg19::chr8:53207047..53207058,+p3@ENST00000522228
Hg19::chr8:56756829..56756848,+p@chr8:56756829..56756848
+
Hg19::chr8:86089498..86089519,+p6@E2F5
Hg19::chr8:86089531..86089544,+p7@E2F5
Hg19::chr8:86089627..86089653,+p3@E2F5
Hg19::chr8:86089662..86089671,+p12@E2F5
Hg19::chr8:86099884..86099918,+p4@E2F5
Hg19::chr9:134552214..134552234,-p@chr9:134552214..134552234
-
Hg19::chr9:35618364..35618415,-p1@CD72
Hg19::chr9:35618447..35618456,-p7@CD72
Hg19::chr9:36981428..36981430,-p@chr9:36981428..36981430
-
Hg19::chr9:37002632..37002666,+p1@ENST00000509911
Hg19::chr9:37003148..37003152,-p5@PAX5
Hg19::chr9:37025768..37025781,-p@chr9:37025768..37025781
-
Hg19::chr9:37027156..37027193,-p4@PAX5
Hg19::chr9:37034277..37034297,+p@chr9:37034277..37034297
+
Hg19::chr9:37034351..37034358,+p@chr9:37034351..37034358
+
Hg19::chr9:37187470..37187495,+p@chr9:37187470..37187495
+
Hg19::chr9:37371347..37371356,+p@chr9:37371347..37371356
+
Hg19::chr9:74301100..74301108,-p@chr9:74301100..74301108
-
Hg19::chr9:82847001..82847021,+p@chr9:82847001..82847021
+
Hg19::chr9:82847043..82847053,+p@chr9:82847043..82847053
+
Hg19::chr9:84270765..84270767,-p@chr9:84270765..84270767
-
Hg19::chr9:93589662..93589730,+p2@SYK
Hg19::chr9:93589734..93589747,+p10@SYK
Hg19::chr9:95491611..95491638,-p@chr9:95491611..95491638
-
Hg19::chrX:118892511..118892526,+p2@SOWAHD
Hg19::chrX:13752917..13752977,+p2@OFD1
Hg19::chrX:39159034..39159048,-p1@ENST00000438026
Hg19::chrX:49086909..49086938,+p@chrX:49086909..49086938
+
Hg19::chrX:77582949..77582959,-p8@CYSLTR1
Hg19::chrX:77582984..77583010,-p2@CYSLTR1
Hg19::chrX:77583024..77583047,-p3@CYSLTR1


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
3.61851816327161e-060.000572630499337732688Hematopoietic cell lineage (KEGG):04640
2.33011253571778e-097.37480617554678e-07875B cell receptor signaling pathway (KEGG):04662
2.7166582023335e-101.71964464207711e-0711161B Cell Receptor Signaling Pathway (Wikipathways):WP23
1.2724155829856e-072.68479688009961e-0514511Signaling in Immune system (Reactome):REACT_6900
7.47507525897941e-050.00788620439822327448{FCGR2B,50} (Static Module):NA
6.40970841609321e-050.00788620439822327317{HCLS1,17} (Static Module):NA



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0044459plasma membrane part8.69684340157993e-10
GO:0002376immune system process2.61187697123425e-09
GO:0006955immune response1.07273223209228e-06
GO:0005887integral to plasma membrane1.07273223209228e-06
GO:0031226intrinsic to plasma membrane1.07273223209228e-06
GO:0019814immunoglobulin complex3.62679970799788e-06
GO:0019815B cell receptor complex3.62679970799788e-06
GO:0046649lymphocyte activation3.62679970799788e-06
GO:0042113B cell activation3.85021397573723e-06
GO:0045321leukocyte activation9.23683158082192e-06
GO:0005886plasma membrane2.41354283046012e-05
GO:0001775cell activation2.41354283046012e-05
GO:0002521leukocyte differentiation2.778117368804e-05
GO:0044425membrane part4.40320254142735e-05
GO:0030098lymphocyte differentiation0.000105905021606921
GO:0006959humoral immune response0.000218718152574894
GO:0050853B cell receptor signaling pathway0.000252420369364762
GO:0016021integral to membrane0.000272367815823108
GO:0031224intrinsic to membrane0.000300970046953354
GO:0030097hemopoiesis0.000533940840611148
GO:0048534hemopoietic or lymphoid organ development0.000758483053711932
GO:0001772immunological synapse0.000758483053711932
GO:0050731positive regulation of peptidyl-tyrosine phosphorylation0.000758483053711932
GO:0002520immune system development0.000890481036423185
GO:0042327positive regulation of phosphorylation0.00179276517811719
GO:0004871signal transducer activity0.00185694193701626
GO:0060089molecular transducer activity0.00185694193701626
GO:0045937positive regulation of phosphate metabolic process0.00206939013156447
GO:0001934positive regulation of protein amino acid phosphorylation0.00229232763956547
GO:0050851antigen receptor-mediated signaling pathway0.00229232763956547
GO:0033240positive regulation of amine metabolic process0.00229232763956547
GO:0045764positive regulation of amino acid metabolic process0.00229232763956547
GO:0050730regulation of peptidyl-tyrosine phosphorylation0.00248396264683151
GO:0016020membrane0.00260633384870108
GO:0030183B cell differentiation0.00260633384870108
GO:0002429immune response-activating cell surface receptor signaling pathway0.00280910288616024
GO:0002768immune response-regulating cell surface receptor signaling pathway0.00295687741871095
GO:0005515protein binding0.00295687741871095
GO:0002757immune response-activating signal transduction0.00315348454123003
GO:0006661phosphatidylinositol biosynthetic process0.00321766955635076
GO:0002764immune response-regulating signal transduction0.00329214608495478
GO:0044464cell part0.0033552672498784
GO:0004872receptor activity0.00490011872974427
GO:0005057receptor signaling protein activity0.00490011872974427
GO:0030217T cell differentiation0.00575516284705213
GO:0007275multicellular organismal development0.00579735245880817
GO:0032502developmental process0.00579735245880817
GO:0018108peptidyl-tyrosine phosphorylation0.00579735245880817
GO:0018212peptidyl-tyrosine modification0.00652206006996487
GO:0032501multicellular organismal process0.00656820216743222
GO:0001932regulation of protein amino acid phosphorylation0.00669869866920849
GO:0033238regulation of amine metabolic process0.00688003703562435
GO:0006521regulation of amino acid metabolic process0.00688003703562435
GO:0008283cell proliferation0.00919648698864331
GO:0048731system development0.00965496260403426
GO:0032943mononuclear cell proliferation0.00971713845269114
GO:0046651lymphocyte proliferation0.00971713845269114
GO:0048869cellular developmental process0.0101981191409447
GO:0030154cell differentiation0.0101981191409447
GO:0000187activation of MAPK activity0.0114264093519731
GO:0048513organ development0.0130248394829955
GO:0042325regulation of phosphorylation0.0154983822395476
GO:0046632alpha-beta T cell differentiation0.0160138393456127
GO:0043406positive regulation of MAP kinase activity0.0164157822660956
GO:0051174regulation of phosphorus metabolic process0.0181030532310509
GO:0019220regulation of phosphate metabolic process0.0181030532310509
GO:0050871positive regulation of B cell activation0.0188043845351736
GO:0042100B cell proliferation0.0188043845351736
GO:0002253activation of immune response0.0188043845351736
GO:0006968cellular defense response0.0192980607195311
GO:0046631alpha-beta T cell activation0.0201251896329609
GO:0016044membrane organization and biogenesis0.0250298625119534
GO:0006486protein amino acid glycosylation0.0270368996375643
GO:0030595leukocyte chemotaxis0.0272679408203429
GO:0000118histone deacetylase complex0.0272679408203429
GO:0003823antigen binding0.0272679408203429
GO:0043413biopolymer glycosylation0.0272679408203429
GO:0051247positive regulation of protein metabolic process0.0275008024621621
GO:0050778positive regulation of immune response0.0275008024621621
GO:0002684positive regulation of immune system process0.0280753251900952
GO:0009101glycoprotein biosynthetic process0.0283173514595235
GO:0050864regulation of B cell activation0.0283173514595235
GO:0046488phosphatidylinositol metabolic process0.0283173514595235
GO:0048856anatomical structure development0.0283173514595235
GO:0030674protein binding, bridging0.0283173514595235
GO:0043126regulation of 1-phosphatidylinositol 4-kinase activity0.0283173514595235
GO:0046638positive regulation of alpha-beta T cell differentiation0.0283173514595235
GO:0043128positive regulation of 1-phosphatidylinositol 4-kinase activity0.0283173514595235
GO:0045588positive regulation of gamma-delta T cell differentiation0.0283173514595235
GO:0046643regulation of gamma-delta T cell activation0.0283173514595235
GO:0042492gamma-delta T cell differentiation0.0283173514595235
GO:0046645positive regulation of gamma-delta T cell activation0.0283173514595235
GO:0042571immunoglobulin complex, circulating0.0283173514595235
GO:0043366beta selection0.0283173514595235
GO:0045586regulation of gamma-delta T cell differentiation0.0283173514595235
GO:0046629gamma-delta T cell activation0.0283173514595235
GO:0004502kynurenine 3-monooxygenase activity0.0283173514595235
GO:0046813virion attachment, binding of host cell surface receptor0.0283173514595235
GO:0043405regulation of MAP kinase activity0.0283173514595235
GO:0007154cell communication0.0301890713169142
GO:0010324membrane invagination0.030230777816049
GO:0006897endocytosis0.030230777816049
GO:0042110T cell activation0.0312412174493656
GO:0050776regulation of immune response0.0312412174493656
GO:0002682regulation of immune system process0.032750037631295
GO:0032403protein complex binding0.0329122703697938
GO:0050671positive regulation of lymphocyte proliferation0.0329122703697938
GO:0032946positive regulation of mononuclear cell proliferation0.0329122703697938
GO:0009100glycoprotein metabolic process0.0343096599299752
GO:0050900leukocyte migration0.0344723708533048
GO:0051240positive regulation of multicellular organismal process0.0355138752750945
GO:0043235receptor complex0.0400692173493072
GO:0046489phosphoinositide biosynthetic process0.0425917706931027
GO:0009887organ morphogenesis0.0434769008379179
GO:0008284positive regulation of cell proliferation0.0434769008379179
GO:0032632interleukin-3 production0.0434769008379179
GO:0005232serotonin-activated cation-selective channel activity0.0434769008379179
GO:0046637regulation of alpha-beta T cell differentiation0.0434769008379179
GO:0042223interleukin-3 biosynthetic process0.0434769008379179
GO:0001865NK T cell differentiation0.0434769008379179
GO:0045401positive regulation of interleukin-3 biosynthetic process0.0434769008379179
GO:0051138positive regulation of NK T cell differentiation0.0434769008379179
GO:0048007antigen processing and presentation, exogenous lipid antigen via MHC class Ib0.0434769008379179
GO:0004949cannabinoid receptor activity0.0434769008379179
GO:0001820serotonin secretion0.0434769008379179
GO:0051136regulation of NK T cell differentiation0.0434769008379179
GO:0030144alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity0.0434769008379179
GO:0045399regulation of interleukin-3 biosynthetic process0.0434769008379179
GO:0051050positive regulation of transport0.0434769008379179
GO:0008373sialyltransferase activity0.0434769008379179
GO:0018193peptidyl-amino acid modification0.0445979381121493
GO:0007243protein kinase cascade0.0447639609071618
GO:0004715non-membrane spanning protein tyrosine kinase activity0.0469602334005007
GO:0005178integrin binding0.0489009162029623



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
blood1.07e-2815
haemolymphatic fluid1.07e-2815
organism substance1.07e-2815
adult organism8.22e-13114
hemopoietic organ1.06e-087
immune organ1.06e-087
hemolymphoid system5.14e-07108


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)
MA0003.12.26617e-15
MA0004.10.0498524
MA0006.10.00847404
MA0007.10.335118
MA0009.10.529564
MA0014.12.18048e-11
MA0017.10.0999926
MA0019.10.128467
MA0024.10.0849767
MA0025.10.0808482
MA0027.10.873219
MA0028.10.000107549
MA0029.10.0524735
MA0030.14.03243
MA0031.11.25005
MA0038.10.0983955
MA0040.10.617213
MA0041.10.00942342
MA0042.10.553065
MA0043.10.223681
MA0046.10.331791
MA0048.10.0200477
MA0050.13.2371
MA0051.10.583426
MA0052.14.8204
MA0055.10.103662
MA0056.10
MA0057.10.0160957
MA0058.10.0347953
MA0059.10.0135445
MA0060.14.87406e-06
MA0061.10.500093
MA0063.10
MA0066.12.44443
MA0067.10.253597
MA0068.10.326412
MA0069.11.78878
MA0070.10.297462
MA0071.10.304555
MA0072.10.435026
MA0073.12.25285e-09
MA0074.10.267257
MA0076.10.0025333
MA0077.10.412601
MA0078.10.589605
MA0081.11.24226
MA0083.10.23624
MA0084.10.53908
MA0087.10.607617
MA0088.18.74347e-05
MA0089.10
MA0090.10.0359324
MA0091.10.673592
MA0092.10.409696
MA0093.10.0339787
MA0095.10
MA0098.10
MA0100.10.337274
MA0101.10.323739
MA0103.11.67483
MA0105.10.0305739
MA0106.10.728431
MA0107.10.177326
MA0108.20.322571
MA0109.10
MA0111.10.192878
MA0113.11.21554
MA0114.10.0145986
MA0115.10.561684
MA0116.10.288376
MA0117.10.0340486
MA0119.10.00233492
MA0122.10.531299
MA0124.10.129913
MA0125.11.63483
MA0130.10
MA0131.10.046352
MA0132.10
MA0133.10
MA0135.10.278757
MA0136.12.02103
MA0139.10.00174176
MA0140.10.219685
MA0141.10.0317721
MA0142.10.485891
MA0143.10.414242
MA0144.10.374025
MA0145.10.197492
MA0146.15.21479e-06
MA0147.10.00783858
MA0148.11.014
MA0149.10.00591593
MA0062.20.000159959
MA0035.20.157069
MA0039.20.000858542
MA0138.20.244421
MA0002.21.8592
MA0137.20.0632644
MA0104.20.00355877
MA0047.20.651376
MA0112.20.127983
MA0065.20.0099754
MA0150.10.0115369
MA0151.10
MA0152.10.320615
MA0153.10.429293
MA0154.10.284382
MA0155.10.0211659
MA0156.12.06236
MA0157.10.669431
MA0158.10
MA0159.10.320028
MA0160.10.288808
MA0161.10
MA0162.17.38511e-12
MA0163.11.02317e-06
MA0164.10.179356
MA0080.23.58403
MA0018.20.000706886
MA0099.20.00181935
MA0079.20
MA0102.20.607137
MA0258.10.341457
MA0259.10.000140128
MA0442.10



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
BATF#10538503.114808413338061.88201254971634e-122.56935305463823e-10
BCL11A#53335785.659379790489391.90937378925643e-359.4958613893406e-33
BCL3#602262.297249802806139.45122834304396e-050.00137017884080951
BRF2#5529038.244825432700890.006012770902890850.0269537205050656
EBF1#18791162.642327760107433.92488792169293e-231.16122201035039e-20
IRF4#3662663.699124903644796.18276274702846e-201.55971390950943e-17
MEF2A#4205944.506045282625423.73920679942783e-351.83342262406311e-32
MEF2C#4208474.965814990161973.69611987148275e-198.8333881752354e-17
NFKB1#47901752.456294371442251.44756699683587e-336.71921998144627e-31
PAX5#50791312.234560318629915.65802214481225e-201.43079461206307e-17
POLR2A#54302791.532325923937862.52749475939695e-237.54197214790451e-21
POU2F2#54521222.841297020574392.97030653114101e-271.05515593131237e-24
SPI1#66881422.979575289540221.14078653949464e-345.54151653015261e-32
TAF1#68721431.222648641589710.002726672775500750.0149745479308263
TBP#69081471.393594094637262.94930946171222e-060.000101024247580112
TCF12#6938902.447830795899691.3162764663363e-152.44609604746792e-13
ZEB1#6935502.159646038049093.17975967025818e-071.59505725361236e-05



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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