FFCP PHASE1:Hg19::chr1:27701307..27701322,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8547 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3625 | |||
|TSSclassifier=weak | |||
|UniProt=O75636,Q6UXM4 | |||
|association_with_transcript=0bp_to_ENST00000270879,ENST00000354982,NM_003665,NM_173452,uc001boa.2,uc001bob.2_5end | |||
|coexpression_cluster_id=C308 | |||
|description=CAGE_peak_1_at_FCN3_5end | |||
|id=chr1:27701307..27701322,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.84e-07;2!CL:1000398;2.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.79e-07,2;CL:1000398,2.79e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.43e-11;7!UBERON:0005062;6.99e-08;4!UBERON:0007284;6.99e-08;4!UBERON:0003104;5.85e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.40e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.41e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-64!115;UBERON:0000025!2.21e-14!194;UBERON:0001049!4.33e-14!57;UBERON:0005068!4.33e-14!57;UBERON:0006241!4.33e-14!57;UBERON:0007135!4.33e-14!57;UBERON:0004111!4.91e-14!241;UBERON:0000477!2.14e-13!286;UBERON:0003075!2.49e-12!86;UBERON:0007284!2.49e-12!86;UBERON:0002346!2.19e-11!90;UBERON:0003080!3.08e-11!42;UBERON:0002616!3.13e-11!59;UBERON:0005743!7.13e-11!86;UBERON:0001017!8.33e-11!82;UBERON:0000955!3.11e-10!69;UBERON:0006238!3.11e-10!69;UBERON:0002780!3.36e-10!41;UBERON:0001890!3.36e-10!41;UBERON:0006240!3.36e-10!41;UBERON:0003103!9.27e-10!69;UBERON:0002298!2.76e-09!8;UBERON:0000481!2.79e-09!347;UBERON:0000073!4.43e-09!94;UBERON:0001016!4.43e-09!94;UBERON:0000483!5.80e-09!309;UBERON:0002368!6.20e-09!35;UBERON:0000119!1.03e-08!312;UBERON:0000062!2.20e-08!511;UBERON:0005057!1.77e-07!26;UBERON:0005177!2.53e-07!107;UBERON:0000949!4.74e-07!45;UBERON:0003296!4.88e-07!4;UBERON:0010133!4.88e-07!4;UBERON:0003056!5.01e-07!61;UBERON:0001893!6.85e-07!34;UBERON:0005172!8.66e-07!55;UBERON:0005173!8.66e-07!55;UBERON:0004151!9.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;6.23e-11;3!UBERON:0003978;2.22e-10;3!UBERON:0000946;2.22e-10;3!UBERON:0001896;7.51e-10;3!UBERON:0005290;7.51e-10;3!UBERON:0007100;2.56e-09;25!UBERON:0007023;1.70e-08;114!UBERON:0002107;9.23e-08;19!UBERON:0006925;9.23e-08;19!UBERON:0002081;1.00e-07;2!UBERON:0002133;1.26e-07;2!UBERON:0002368;2.25e-07;33!UBERON:0001281;2.84e-07;2!UBERON:0003497;2.84e-07;2!UBERON:0003909;2.84e-07;2!UBERON:0003835;2.84e-07;2!UBERON:0000007;3.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-31,114;UBERON:0004151,6.13e-11,3;UBERON:0003978,1.92e-10,3;UBERON:0009751,1.92e-10,3;UBERON:0000946,1.92e-10,3;UBERON:0002523,1.92e-10,3;UBERON:0005983,1.92e-10,3;UBERON:0002165,1.92e-10,3;UBERON:0002062,1.92e-10,3;UBERON:0007280,1.92e-10,3;UBERON:0005177,5.51e-10,101;UBERON:0001896,7.29e-10,3;UBERON:0005290,7.29e-10,3;UBERON:0010096,7.29e-10,3;UBERON:0005172,1.31e-08,54;UBERON:0005173,1.31e-08,54;UBERON:0009856,1.56e-08,26;UBERON:0007100,1.62e-08,27;UBERON:0003103,2.20e-08,68;UBERON:0009854,6.41e-08,23;UBERON:0002107,9.09e-08,19;UBERON:0006925,9.09e-08,19;UBERON:0008836,9.09e-08,19;UBERON:0002081,9.87e-08,2;UBERON:0010227,9.87e-08,2;UBERON:0009569,1.20e-07,112;UBERON:0002133,1.24e-07,2;UBERON:0002368,1.56e-07,35;UBERON:0002417,1.93e-07,60;UBERON:0000916,1.93e-07,60;UBERON:0001281,2.79e-07,2;UBERON:0003497,2.79e-07,2;UBERON:0003909,2.79e-07,2;UBERON:0003835,2.79e-07,2;UBERON:0000007,2.98e-07,2;UBERON:0007499,3.45e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,107.402841908124,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.7157309109916,1.40241773803446,0.4115740113314,0,15.2106041786197,5.89696330006576,293.622583620658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0,0,1.54324424557285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.510281115829547,1.0795795805107,0,0,0,0,0.831076008928724,0,0,0,0,0,0,195.984004153968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,195.442530412594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5043097479175,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,1.38100767891707,0,0,0.969332746095218,0.463840490809256,0,0,0,83.3749511750013,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76915129006678,0.611030144933625,0,0,0,0.876214728748802,0.802577647298789,0,0,0,0,0,0,0,6.25547138322031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90967049465258,0,5.64951851951331,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86493042671734,2.97908551215189,18.6646986389972,39.5364420988002,75.973010520173,96.4100696148889,33.2558188809295,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,0.242998226632099,0,42.555081941567,11.0679180964846,0,0,0,10.7204298956005,86.0719561475061,0,0,0,0,0,0,0,0,242.837051204583,120.581268910121,0.129282956361551,0,0,0,704.369773296514,27.0391404771425,283.339513857482,3.47316215268366,0,0,0,1.08803560673895,2.0055191521816,0.612691153526923,0.327872630709804,0,0,0.366078794705889,0.1251909307065,2.29363678276028,4.21530395840039,1.55241007353459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0.82731361184183,0,6.25211208986474,0,0,0,0.0675375846183947,0,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0.336283722218824,1.82089681270989,6.82986574053893,9.31374886707708,0,0,0.0679697329768317,0.0657727735628491,0,0,0.706437835654626,0.314231179832004,0,0.913158720509496,0,0,2.64463213453628,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,1.94228651156368,2.15591894398119,0,2.4285549652957,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,8.64652045414653,18.1126665205752,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,2.04602485189246,0.267964130156178,0,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0.931120714437869,0,28.8321627000087,0.606351566874658,0.435433495793923,0.342233301085281,0.673520530145875,4.94883217209467,0.99798106963804,0,0,0,0,23.4640942403454,0.122241444182866,1.22068853494722,1.99727032255654,1.00636896795513,0 | |||
|short_description=p1@FCN3 | |||
}} |
Revision as of 17:19, 10 January 2014
Short description: | p1@FCN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCN3_5end |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | 0bp_to_ENST00000270879, ENST00000354982, NM_003665, NM_173452, uc001boa.2, uc001bob.2_5end |
EntrezGene: | FCN3 |
HGNC: | 3625 |
UniProt: | O75636Q6UXM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.79e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-31 | 114 |
cardiac chamber | 6.13e-11 | 3 |
valve | 1.92e-10 | 3 |
cardiac mesenchyme | 1.92e-10 | 3 |
cardial valve | 1.92e-10 | 3 |
tunica intima | 1.92e-10 | 3 |
heart layer | 1.92e-10 | 3 |
endocardium | 1.92e-10 | 3 |
endocardial cushion | 1.92e-10 | 3 |
presumptive endocardium | 1.92e-10 | 3 |
trunk region element | 5.51e-10 | 101 |
medulla oblongata | 7.29e-10 | 3 |
myelencephalon | 7.29e-10 | 3 |
future myelencephalon | 7.29e-10 | 3 |
abdomen element | 1.31e-08 | 54 |
abdominal segment element | 1.31e-08 | 54 |
sac | 1.56e-08 | 26 |
primary circulatory organ | 1.62e-08 | 27 |
compound organ | 2.20e-08 | 68 |
digestive tract diverticulum | 6.41e-08 | 23 |
liver | 9.09e-08 | 19 |
digestive gland | 9.09e-08 | 19 |
liver bud | 9.09e-08 | 19 |
cardiac atrium | 9.87e-08 | 2 |
future cardiac atrium | 9.87e-08 | 2 |
subdivision of trunk | 1.20e-07 | 112 |
atrioventricular valve | 1.24e-07 | 2 |
endocrine gland | 1.56e-07 | 35 |
abdominal segment of trunk | 1.93e-07 | 60 |
abdomen | 1.93e-07 | 60 |
hepatic sinusoid | 2.79e-07 | 2 |
abdomen blood vessel | 2.79e-07 | 2 |
sinusoid | 2.79e-07 | 2 |
abdominal segment blood vessel | 2.79e-07 | 2 |
pituitary gland | 2.98e-07 | 2 |
epithelial sac | 3.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.41e-08 | 2 |