FFCP PHASE1:Hg19::chr1:110429102..110429103,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2512 | |||
|description=CAGE_peak_at_chr1:110429102..110429103,+ | |||
|id=chr1:110429102..110429103,+ | |||
|ontology_enrichment_celltype=CL:0002539!7.31e-36!10;CL:0000054!2.90e-12!2;CL:0000137!2.90e-12!2;CL:0000092!2.90e-12!2;CL:0000359!1.50e-11!32;CL:0000192!6.91e-09!42;CL:0000514!6.91e-09!42;CL:0000187!5.55e-07!54;CL:0000569!9.63e-07!4;CL:0000011!9.63e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002539;5.78e-79;10!CL:0000359;7.93e-25;32!CL:0000192;8.99e-15;43!CL:0000187;4.19e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,5.79e-79,10;CL:0000359,1.80e-25,32;CL:0000192,3.24e-19,43;CL:0000514,3.24e-19,43;CL:0000187,3.12e-15,55;CL:0000680,1.72e-14,58;CL:0000056,1.72e-14,58;CL:0000355,1.72e-14,58;CL:0000393,7.99e-14,61;CL:0000211,7.99e-14,61;CL:0000222,2.26e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;8.99e-15;43!CL:0000355;1.28e-07;58 | |||
|ontology_enrichment_disease=DOID:0060085!4.10e-23!1;DOID:3165!4.10e-23!1;DOID:0060121!4.10e-23!1;DOID:2438!4.10e-23!1;DOID:4418!4.10e-23!1;DOID:200!2.90e-12!2;DOID:4305!2.90e-12!2;DOID:0060072!9.11e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004237!7.31e-36!10;UBERON:0004695!7.31e-36!10;UBERON:0002111!7.31e-36!10;UBERON:0004178!7.31e-36!10;UBERON:0001135!4.15e-24!15;UBERON:0000947!2.28e-17!21;UBERON:0010191!2.28e-17!21;UBERON:0004573!3.28e-11!33;UBERON:0004571!3.28e-11!33;UBERON:0001637!6.91e-09!42;UBERON:0003509!6.91e-09!42;UBERON:0004572!6.91e-09!42;UBERON:0000014!9.11e-07!4;UBERON:0004872!9.35e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;5.78e-79;10!UBERON:0004695;5.78e-79;10!UBERON:0002111;5.78e-79;10!UBERON:0004178;5.78e-79;10!UBERON:0001135;4.60e-53;15!UBERON:0000947;3.06e-38;21!UBERON:0010191;3.06e-38;21!UBERON:0002385;5.83e-26;31!UBERON:0001015;5.83e-26;31!UBERON:0000383;5.83e-26;31!UBERON:0004573;3.72e-25;33!UBERON:0004571;3.72e-25;33!UBERON:0001637;1.23e-13;42!UBERON:0003509;1.23e-13;42!UBERON:0004572;1.23e-13;42!UBERON:0007500;8.22e-08;56!UBERON:0001981;8.22e-08;56!UBERON:0004537;8.22e-08;56!UBERON:0002204;5.37e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,5.79e-79,10;UBERON:0004695,5.79e-79,10;UBERON:0002111,5.79e-79,10;UBERON:0004178,5.79e-79,10;UBERON:0001135,4.60e-53,15;UBERON:0000947,3.06e-38,21;UBERON:0010191,3.06e-38,21;UBERON:0004573,9.87e-25,33;UBERON:0004571,9.87e-25,33;UBERON:0001637,1.19e-19,42;UBERON:0003509,1.19e-19,42;UBERON:0004572,1.19e-19,42;UBERON:0007500,2.92e-14,59;UBERON:0001981,2.92e-14,59;UBERON:0004537,2.92e-14,59;UBERON:0006965,2.92e-14,59;UBERON:0001134,1.29e-13,62;UBERON:0002036,1.29e-13,62;UBERON:0003082,1.29e-13,62;UBERON:0002385,3.22e-13,64;UBERON:0001015,3.22e-13,64;UBERON:0000383,3.22e-13,64;UBERON:0000055,1.71e-12,68;UBERON:0002329,5.31e-12,71;UBERON:0003059,5.31e-12,71;UBERON:0007282,5.31e-12,71;UBERON:0004290,5.31e-12,71;UBERON:0009618,5.31e-12,71;UBERON:0003077,7.58e-12,72;UBERON:0007285,7.58e-12,72;UBERON:0007524,1.07e-11,73;UBERON:0002049,5.31e-11,78;UBERON:0007503,5.31e-11,78;UBERON:0007798,5.31e-11,78;UBERON:0000486,2.17e-10,83;UBERON:0004872,2.17e-10,83;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.72325146451775,6.62963980826375,5.84248072309899,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:110429102..110429103,+ | |||
}} |
Revision as of 20:01, 10 January 2014
Short description: | p@chr1:110429102..110429103, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:110429102..110429103, + |
Coexpression cluster: | C2512_Aortic_CD14_Fibroblast_Smooth_extraskeletal_tridermal_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 5.79e-79 | 10 |
vascular associated smooth muscle cell | 1.80e-25 | 32 |
smooth muscle cell | 3.24e-19 | 43 |
smooth muscle myoblast | 3.24e-19 | 43 |
muscle cell | 3.12e-15 | 55 |
muscle precursor cell | 1.72e-14 | 58 |
myoblast | 1.72e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.72e-14 | 58 |
electrically responsive cell | 7.99e-14 | 61 |
electrically active cell | 7.99e-14 | 61 |
mesodermal cell | 2.26e-07 | 121 |