FFCP PHASE1:Hg19::chr1:153348067..153348103,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10489 | |||
|TSSclassifier=not | |||
|UniProt=P80511 | |||
|association_with_transcript=0bp_to_ENST00000368736,NM_005621,uc001fbr.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_S100A12_5end | |||
|id=chr1:153348067..153348103,- | |||
|ontology_enrichment_celltype=CL:0002057!3.28e-35!42;CL:0000766!3.11e-32!76;CL:0000860!2.15e-31!45;CL:0000738!2.51e-29!140;CL:0002194!5.88e-28!63;CL:0000576!5.88e-28!63;CL:0000040!5.88e-28!63;CL:0000559!5.88e-28!63;CL:0002087!9.61e-27!119;CL:0002009!2.30e-26!65;CL:0000839!3.01e-24!70;CL:0000557!1.42e-23!71;CL:0000037!1.39e-22!172;CL:0000566!1.39e-22!172;CL:0002031!2.69e-22!124;CL:0002032!4.73e-20!165;CL:0000837!4.73e-20!165;CL:0000988!2.70e-19!182;CL:0000763!1.40e-18!112;CL:0000049!1.40e-18!112;CL:0000094!1.48e-08!8;CL:0002393!2.24e-07!9;CL:0002397!2.24e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.21e-30;33!CL:0002057;1.21e-30;33!CL:0000473;2.53e-24;39!CL:0000234;2.53e-24;39!CL:0000576;1.97e-21;48!CL:0000766;3.33e-16;69!CL:0000094;1.11e-09;8!CL:0002087;2.60e-09;104!CL:0000763;8.17e-08;100!CL:0000738;2.77e-07;136!CL:0002393;8.58e-07;6!CL:0002397;8.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-40,42;CL:0002057,1.18e-40,42;CL:0000473,7.12e-39,48;CL:0000234,7.12e-39,48;CL:0000766,2.96e-33,72;CL:0002194,1.19e-29,59;CL:0000576,1.19e-29,59;CL:0000040,1.19e-29,59;CL:0000559,1.19e-29,59;CL:0000738,7.65e-29,136;CL:0002009,4.87e-28,61;CL:0002087,2.59e-26,115;CL:0000839,1.86e-24,66;CL:0000557,8.25e-24,67;CL:0000037,2.81e-23,168;CL:0002031,6.20e-21,120;CL:0000988,1.61e-20,177;CL:0002032,2.11e-20,161;CL:0000837,2.11e-20,161;CL:0000763,2.42e-20,108;CL:0000049,2.42e-20,108;CL:0000094,1.11e-09,8;CL:0002393,2.59e-08,9;CL:0002397,2.59e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.79e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.61e-31!115;UBERON:0002390!9.09e-27!102;UBERON:0003061!9.09e-27!102;UBERON:0002193!2.64e-24!112;UBERON:0002371!3.15e-19!80;UBERON:0001474!2.42e-16!86;UBERON:0002405!1.06e-14!115;UBERON:0004765!7.00e-14!101;UBERON:0001434!7.00e-14!101;UBERON:0001049!1.74e-08!57;UBERON:0005068!1.74e-08!57;UBERON:0006241!1.74e-08!57;UBERON:0007135!1.74e-08!57;UBERON:0000178!2.35e-07!15;UBERON:0000179!2.35e-07!15;UBERON:0000463!2.35e-07!15;UBERON:0003080!8.97e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-08;15!UBERON:0000179;1.31e-08;15!UBERON:0000463;1.31e-08;15!UBERON:0007023;5.07e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.96e-28,98;UBERON:0003061,5.96e-28,98;UBERON:0007023,4.01e-26,114;UBERON:0002193,3.66e-25,108;UBERON:0002371,1.06e-19,76;UBERON:0002405,2.54e-18,93;UBERON:0001474,6.16e-17,82;UBERON:0004765,2.71e-16,90;UBERON:0001434,2.09e-13,100;UBERON:0000178,1.32e-08,15;UBERON:0000179,1.32e-08,15;UBERON:0000463,1.32e-08,15;UBERON:0003081,8.29e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,962.169021172419,871.67656307877,493.089352761702,9.19421224478927,1.8072355126695,1.84877005083394,0,0,4.11040615068786,847.058979645241,667.612465628102,350.472556206101,0.671746422719773,0.971680998056939,0.515151135268373,838.220846564191,341.599853094684,353.444977150648,1082.65445390668,337.980003953941,531.146426085103,1136.09725728017,496.439449253397,741.844755160492,981.490953057153,360.825938123359,521.391973388216,922.575706098306,396.259729883992,642.933888997387,1221.88689834464,513.807372348826,460.32273057531,1066.40925350365,474.125114166619,476.519271095552,1473.10209527869,434.617082113413,507.600132931394,1105.74537579493,438.045651472969,766.459432964357,1261.65256348794,616.865040279171,842.739337755075,62.1090541757109,137.129773477453,247.187543054375,1368.27505599546,1737.54665017623,1092.45181278005,8.26536956849621,8.95125047395906,14.0651398398768,1.75996244461323,13.6534652815533,1.77901850772711,67.4233751655081,5.60554381850417,10.3455439191807,11.8988077101275,5.72432252721218,7.96898156753228,23.4894875748376,11.8504700718821,29.0776922873857,153.018837693959,3.95076127162616,0.196709770113833,1.17903228824749,3.70082698199117,0,0.651844533267181,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0.267540828089713,2.09071047609954,0,0.766440987203842,0,0.253019692019503,12.1054857443157,0,0.950452044448374,42.6127586990097,14.5904736716037,43.7257542933211,48.3025594169794,7.39015197228942,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0.702678285545008,2.88153966094968,14.2075162434091,4.44941331341315,0,0,0,72.501149788824,60.0594656319134,10.0293525358983,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,545.570928185302,1958.29033394904,17.0076680335588,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.474778409804,66.5500534241637,9.46455164783713,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0.539325232640658,0,0,0,0,0,0,0,30.4676437170064,3.54473944008842,0,0,0,2.41450627898976,2.24803506515239,0.100528972411631,0.740707561268237,0,0,0,0,0,0,0,0,0,0.858486162094873,0.984868024349589,0.936017060556951,4.01304138179566,46.8669169933885,1.17587489739202,37.0033003802629,0,0.871901815541886,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,4.21667878966063,0,0,0,0,0,0,0,28.9635217496833,1.50939302401662,24.3851768931522,0,0,0,0,0,1086.80919174736,1142.79677415938,2172.3661214317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,263.422465280559,416.544121780749,138.318914913264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.368323955743585,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.2822467622143,0,0,17.2279661398852,3.25030123018261,0,0,0,0,0,0,0,0.596586391912706,0,9.58652509093673,1.72971060628596,1.91419068741876,2.73126008309985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,1.05553817648832,0,0,0,1.15466535270614,6.70302275535787,3.26672954583968,32.9503302718727,1.72202149068492,26.9554361068201,6.20802214951346,0,337.960107748625,334.146459521218,317.293483256009,175.576818512391,341.430686661541,452.634371212517,382.342257564585,250.627555708989,0,0,0.245040215981032,0,0,0,0,0,20.6825799742956,0,0,0,0,1.25343916618419,0,0,41.1105472265471,1.81619736471943,70.6904754565942,4.12206413706918,0.921722292925374,1.11838053946208,0.500547425135725,1.75849285861836,0,0,0,0,0,0,16.9949487955397,0,0,0,0,13.957339999134,0,4.97073823883149,2.39138007897872,0,26.2038160020548,0,4.18420775327246,0.276283915531148,0,0,0,0,0,0.179021174675609,0,2.56472854656027,397.54193329592,0,0,7.0503754603007,5.98841394003583,0,0,0.724999575434793,0.341380344856499,0,1.89110145414349,0,0,0,11.5146380155799,2.05013945663194,3.05163472634166,2.21158519862449,0,0,0,14.6394931492533,10.619135673524,0,0,0,0,0.957003479195758,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,4.5113357896703,9.77648231893801,0,0,0,1.41542379259422,4.01288823649394,0,0,0,0,0.394584402849391,2.41981432097328,0,39.5547988474335,0,0,0,0,0,0,0,0,0,0.979923974143776,0,1.57254001417827,0,0,0,0,29.0967049465258,0,6.55344148263544,0,0,0.126621591911757,2.93327074102205,0.400794101257669,0.426905989478705,0.19980960958213,0,0,0,0,0,4.9495747269527,0,0,0,0,9.60672461935663,1.64286454670392,0,0,0,1.67569440763353,0,16.5110795652667,3.59422200898184,6.43839072204856,128.76993094396,40.4444504370092,0,0,0,0,0,0,0,3.18091875923721,2.04305109167363,0,0,0,0,0,0.789744236554321,64.0680253314598,3.94028536495991,21.4539265472142,0,0,0,21.440859791201,198.627591109629,0,0,0,0,0,0,0,0,11.4310742268904,87.4545466820661,5.04203529810047,3.17358244182456,0,0,143.842644728685,75.1436578376403,15.7410841031934,84.8443897298436,0,0,0,0,0,0,0,0,4.43034089983493,4.39294553647067,4.38168257472749,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| |||
|short_description=p1@S100A12 | |||
}} |
Revision as of 20:59, 10 January 2014
Short description: | p1@S100A12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_S100A12_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000368736, NM_005621, uc001fbr.1_5end |
EntrezGene: | S100A12 |
HGNC: | 10489 |
UniProt: | P80511 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.18e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.18e-40 | 42 |
defensive cell | 7.12e-39 | 48 |
phagocyte | 7.12e-39 | 48 |
myeloid leukocyte | 2.96e-33 | 72 |
monopoietic cell | 1.19e-29 | 59 |
monocyte | 1.19e-29 | 59 |
monoblast | 1.19e-29 | 59 |
promonocyte | 1.19e-29 | 59 |
leukocyte | 7.65e-29 | 136 |
macrophage dendritic cell progenitor | 4.87e-28 | 61 |
nongranular leukocyte | 2.59e-26 | 115 |
myeloid lineage restricted progenitor cell | 1.86e-24 | 66 |
granulocyte monocyte progenitor cell | 8.25e-24 | 67 |
hematopoietic stem cell | 2.81e-23 | 168 |
hematopoietic lineage restricted progenitor cell | 6.20e-21 | 120 |
hematopoietic cell | 1.61e-20 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-20 | 161 |
myeloid cell | 2.42e-20 | 108 |
common myeloid progenitor | 2.42e-20 | 108 |
granulocyte | 1.11e-09 | 8 |
intermediate monocyte | 2.59e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.96e-28 | 98 |
blood island | 5.96e-28 | 98 |
adult organism | 4.01e-26 | 114 |
hemolymphoid system | 3.66e-25 | 108 |
bone marrow | 1.06e-19 | 76 |
immune system | 2.54e-18 | 93 |
bone element | 6.16e-17 | 82 |
skeletal element | 2.71e-16 | 90 |
skeletal system | 2.09e-13 | 100 |
blood | 1.32e-08 | 15 |
haemolymphatic fluid | 1.32e-08 | 15 |
organism substance | 1.32e-08 | 15 |
lateral plate mesoderm | 8.29e-08 | 203 |