FFCP PHASE1:Hg19::chr10:4822908..4822927,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C391 | |||
|description=CAGE_peak_at_chr10:4822908..4822927,- | |||
|id=chr10:4822908..4822927,- | |||
|ontology_enrichment_celltype=CL:0002139!1.90e-18!24;CL:0005020!2.62e-13!6;CL:0002138!2.62e-13!6;CL:0005022!2.62e-13!6;CL:0000115!4.69e-12!35;CL:1000306!3.12e-11!4;CL:0002547!3.12e-11!4;CL:0002078!3.29e-09!44;CL:0000071!3.40e-09!18;CL:0002546!3.40e-09!18;CL:0002144!7.97e-08!3;CL:0002166!2.26e-07!3;CL:0002618!4.83e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.61e-30;3!CL:0000054;2.90e-12;2!CL:0000137;2.90e-12;2!CL:0000092;2.90e-12;2!CL:0000083;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,4.84e-30,3;CL:0000054,2.90e-12,2;CL:0000137,2.90e-12,2;CL:0000092,2.90e-12,2;CL:0000062,5.41e-09,11;CL:0000375,5.41e-09,11;CL:0000335,5.41e-09,11;CL:0000083,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000335;5.41e-09;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;1.67e-23;1!DOID:0060085;4.10e-23;1!DOID:3165;4.10e-23;1!DOID:0060121;4.10e-23;1!DOID:2438;4.10e-23;1!DOID:4418;4.10e-23;1!DOID:201;1.13e-15;6!DOID:0060100;1.13e-15;6!DOID:4074;2.90e-12;2!DOID:4905;2.90e-12;2!DOID:200;2.90e-12;2!DOID:4305;2.90e-12;2!DOID:3498;2.90e-12;2!DOID:4556;8.31e-09;3!DOID:0060072;9.10e-07;4!DOID:1793;9.10e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.67e-23,1;DOID:0060085,4.10e-23,1;DOID:3165,4.10e-23,1;DOID:0060121,4.10e-23,1;DOID:2438,4.10e-23,1;DOID:4418,4.10e-23,1;DOID:201,1.13e-15,6;DOID:0060100,1.13e-15,6;DOID:4074,2.59e-12,2;DOID:4905,2.59e-12,2;DOID:3498,2.59e-12,2;DOID:200,2.90e-12,2;DOID:4305,2.90e-12,2;DOID:4556,8.31e-09,3;DOID:1793,8.61e-07,4;DOID:0060072,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000415!3.12e-11!4;UBERON:0007240!3.12e-11!4;UBERON:0005742!3.12e-11!4;UBERON:0005734!3.12e-11!4;UBERON:0004664!3.12e-11!4;UBERON:0004663!3.12e-11!4;UBERON:0000055!1.14e-10!69;UBERON:0001473!5.28e-10!8;UBERON:0004536!5.28e-10!8;UBERON:0006558!5.28e-10!8;UBERON:0001986!3.40e-09!18;UBERON:0004638!3.40e-09!18;UBERON:0004852!3.40e-09!18;UBERON:0002049!5.96e-09!79;UBERON:0007798!5.96e-09!79;UBERON:0002465!5.15e-08!10;UBERON:0001915!7.97e-08!3;UBERON:0001982!7.97e-08!3;UBERON:0004535!1.25e-07!110;UBERON:0000487!2.07e-07!22;UBERON:0001009!2.43e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.61e-30;3!UBERON:0001915;5.61e-30;3!UBERON:0001982;5.61e-30;3!UBERON:0000014;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.84e-30,3;UBERON:0001915,4.84e-30,3;UBERON:0001982,4.84e-30,3;UBERON:0000014,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0.35576626268671,0,0,1.52054421143703,1.95249646038536,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.403008392910561,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32949287252801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69946265673865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58971689362392,0,0,0.320635281006135,0,0,0,0.114536596165916,0,0,7.33089959836052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.0512511509498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1421595563606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88184358887261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:4822908..4822927,- | |||
}} |
Revision as of 01:30, 11 January 2014
Short description: | p@chr10:4822908..4822927, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4822908..4822927, - |
Coexpression cluster: | C391_large_bronchioalveolar_fibrosarcoma_lung_pancreatic_giant_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 4.84e-30 | 3 |
bone matrix secreting cell | 2.90e-12 | 2 |
osteocyte | 2.90e-12 | 2 |
osteoclast | 2.90e-12 | 2 |
osteoblast | 5.41e-09 | 11 |
osteoprogenitor cell | 5.41e-09 | 11 |
mesenchyme condensation cell | 5.41e-09 | 11 |
epithelial cell of pancreas | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.84e-30 | 3 |
endothelium of capillary | 4.84e-30 | 3 |
capillary | 4.84e-30 | 3 |
zone of skin | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.67e-23 | 1 |
organ system benign neoplasm | 4.10e-23 | 1 |
skin benign neoplasm | 4.10e-23 | 1 |
integumentary system benign neoplasm | 4.10e-23 | 1 |
dermis tumor | 4.10e-23 | 1 |
cutaneous fibrous histiocytoma | 4.10e-23 | 1 |
connective tissue cancer | 1.13e-15 | 6 |
musculoskeletal system cancer | 1.13e-15 | 6 |
pancreas adenocarcinoma | 2.59e-12 | 2 |
pancreatic carcinoma | 2.59e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.59e-12 | 2 |
giant cell tumor | 2.90e-12 | 2 |
bone giant cell tumor | 2.90e-12 | 2 |
lung large cell carcinoma | 8.31e-09 | 3 |
pancreatic cancer | 8.61e-07 | 4 |
benign neoplasm | 9.11e-07 | 4 |