FFCP PHASE1:Hg19::chr10:8097321..8097348,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4172 | |||
|TSSclassifier=strong | |||
|UniProt=P23771 | |||
|association_with_transcript=-69bp_to_X55122_5end | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_4_at_GATA3_5end | |||
|id=chr10:8097321..8097348,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.99e-12!25;CL:0000827!6.99e-12!25;CL:0000791!1.83e-08!18;CL:0000789!1.83e-08!18;CL:0002420!1.83e-08!18;CL:0002419!1.83e-08!18;CL:0000790!1.83e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.94e-16;25!CL:0000349;7.01e-15;19!CL:0000791;3.93e-12;18!CL:0000789;3.93e-12;18!CL:0002419;3.93e-12;18!CL:0000624;1.43e-10;6!CL:0002541;2.54e-09;3!CL:0000623;2.55e-08;3!CL:0002577;2.89e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.31e-16,25;CL:0000827,1.31e-16,25;CL:0000349,6.09e-15,19;CL:0000791,3.13e-12,18;CL:0000789,3.13e-12,18;CL:0002420,3.13e-12,18;CL:0002419,3.13e-12,18;CL:0000790,3.13e-12,18;CL:0000624,8.50e-11,6;CL:0000838,8.89e-10,52;CL:0000542,1.63e-09,53;CL:0000051,1.63e-09,53;CL:0002541,2.41e-09,3;CL:0002577,2.34e-08,3;CL:0000623,3.09e-08,3;CL:0000825,3.09e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.93e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;4.08e-12;4!DOID:1612;4.08e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.05e-12,4;DOID:1612,4.05e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.54e-10!14;UBERON:0000158!2.54e-10!14;UBERON:0000478!3.17e-08!24;UBERON:0003124!3.74e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.46e-16;10!UBERON:0000158;1.46e-16;10!UBERON:0000478;8.00e-16;24!UBERON:0001987;1.76e-10;4!UBERON:0000305;1.61e-09;7!UBERON:0003124;2.54e-09;3!UBERON:0000920;2.54e-09;3!UBERON:0006947;6.17e-08;3!UBERON:0004054;6.17e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.21e-25,14;UBERON:0000158,3.21e-25,14;UBERON:0003124,3.96e-18,7;UBERON:0000478,7.41e-16,24;UBERON:0001987,1.64e-10,4;UBERON:0004340,1.64e-10,4;UBERON:0000305,1.62e-09,7;UBERON:0000920,2.41e-09,3;UBERON:0004871,2.87e-08,8;UBERON:0006947,7.72e-08,3;UBERON:0004054,7.72e-08,3 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,2.18441372130172,2.37390280405608,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,1.00272223735071,1.08505435357926,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,1.96709770113833,7.07419372948497,6.37364646898479,1.17030546773475,0,0.946895611469467,0,8.0215528957325,2.65145316727353,0.886135578334485,2.43723477388514,5.50792674820403,6.50296737799391,5.26201294731764,4.42160028457357,1.15921234294021,0.593146252648242,0.802622484269139,0,1.81294948316106,1.53288197440768,2.06176467289578,2.02415753615602,0,1.30216690771284,0,0.602300476311091,0.255973222308837,0,1.18388626022008,0.821127996921047,2.62088766192152,12.3022490060413,2.17236605824198,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.658501712451753,0,0.502644862058154,0,0,0,0,0.115930404975077,0,0,0,0,46.6220594795972,26.613071024941,0,0,0,0,0,0,0.0895585227028483,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.448340575974109,1.18218456121156,4.74380664690938,3.46526197955321,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.533637789017222,3.03127571446259,1.66435439510497,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,1.60405176242628,1.47329582297434,0,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0,1.03041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,5.05414427002877,0.886860307073351,0.229723400206959,0,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0,0,2.37937552888281,0,0,0.980160863924127,0,0.721346064882224,1.70740424036194,2.71024663638998,0,0.191505370132367,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.99921590399346,0,0,0,0,2.22886768554957,0,6.20735660317994,6.83018765915069,5.22173193568695,0,0,0.333926115068718,0.329607748453519,0,0,0,0,0.20453736500431,0,0,0,0.716084698702437,0,0.394573622547734,0,0,0,0,0,35.678603268677,7.52155999967283,0.724999575434793,0.455173793141999,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,9.45312007991047,12.7455855061876,9.99555821682474,16.2690591463279,4.76307485689684,57.0347210339939,2.04386596391473,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.741383633679017,0.730953646538188,0,0,0.234264445725339,0,0,0.242780379534093,1.57833761139756,0,0,0.063186579628488,0,0.103688191397247,0,0.992975867626496,0.313932918407225,0,0,0.693373365065693,0,0.293977192243133,0.34823682632161,1.04836000945218,0,0,0,0.0821154570532092,0,0,0.225980740780532,0.274083849293502,0,0,0.391102765469606,0.160317640503067,0.213452994739353,0.599428828746391,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.305994652908965,0,0,0,0,0,0,0,0.458320848023367,0,1.79711100449092,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,0.236417121897595,0.629455057619977,0,0,1.91915197319445,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0.39669780522807,0,0,0,0.157204305099666,0,1.48849806543585,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,1.14241563650639,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0.680117776536817,1.62065732026684,1.22368352253234,0.179088841081487,0,0,1.06013487567529,0.192914038270915,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0.491545817507439,0,0.79994958341972,0,0,0.567515953566836,0,0,0.622077260032973,1.91841556955478,3.66604358748718,0,4.25917588948854,0.169732529954025,0,1.23935764259002,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0.183428598521679,0,0,0.690359926060101,0,0,0,0,5.76194727859129,0.327543835020193,0.147856086217045,0,0,0,0,0,0,1.48863353516788,0,0.12776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| |||
|short_description=p4@GATA3 | |||
}} |
Revision as of 01:39, 11 January 2014
Short description: | p4@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GATA3_5end |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | -69bp_to_X55122_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | P23771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.31e-16 | 25 |
pro-T cell | 1.31e-16 | 25 |
extraembryonic cell | 6.09e-15 | 19 |
mature alpha-beta T cell | 3.13e-12 | 18 |
alpha-beta T cell | 3.13e-12 | 18 |
immature T cell | 3.13e-12 | 18 |
mature T cell | 3.13e-12 | 18 |
immature alpha-beta T cell | 3.13e-12 | 18 |
CD4-positive, alpha-beta T cell | 8.50e-11 | 6 |
lymphoid lineage restricted progenitor cell | 8.89e-10 | 52 |
lymphocyte | 1.63e-09 | 53 |
common lymphoid progenitor | 1.63e-09 | 53 |
chorionic membrane mesenchymal stem cell | 2.41e-09 | 3 |
placental epithelial cell | 2.34e-08 | 3 |
natural killer cell | 3.09e-08 | 3 |
pro-NK cell | 3.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.21e-25 | 14 |
membranous layer | 3.21e-25 | 14 |
chorion | 3.96e-18 | 7 |
extraembryonic structure | 7.41e-16 | 24 |
placenta | 1.64e-10 | 4 |
allantois | 1.64e-10 | 4 |
amnion | 1.62e-09 | 7 |
egg chorion | 2.41e-09 | 3 |
somatic layer of lateral plate mesoderm | 2.87e-08 | 8 |
male genital duct | 7.72e-08 | 3 |
internal male genitalia | 7.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.05e-12 | 4 |
breast cancer | 4.05e-12 | 4 |