FFCP PHASE1:Hg19::chr10:26726690..26726726,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17379 | |||
|TSSclassifier=strong | |||
|UniProt=B4E100 | |||
|association_with_transcript=0bp_to_ENST00000445780_5end | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_6_at_APBB1IP_5end | |||
|id=chr10:26726690..26726726,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.16e-44!172;CL:0000566!5.16e-44!172;CL:0000988!2.23e-41!182;CL:0002032!3.25e-38!165;CL:0000837!3.25e-38!165;CL:0000542!2.21e-36!53;CL:0000051!2.21e-36!53;CL:0000738!1.85e-35!140;CL:0000838!4.40e-35!52;CL:0002087!1.36e-31!119;CL:0002031!7.28e-26!124;CL:0000945!8.84e-18!24;CL:0000826!8.84e-18!24;CL:0000084!2.55e-15!25;CL:0000827!2.55e-15!25;CL:0000791!4.96e-15!18;CL:0000789!4.96e-15!18;CL:0002420!4.96e-15!18;CL:0002419!4.96e-15!18;CL:0000790!4.96e-15!18;CL:0000763!4.03e-10!112;CL:0000049!4.03e-10!112;CL:0000624!4.92e-10!6;CL:0000134!2.78e-09!358;CL:0002320!1.05e-08!365;CL:0000625!2.30e-08!11;CL:0000219!9.70e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.56e-27;25!CL:0000791;9.62e-23;18!CL:0000789;9.62e-23;18!CL:0002419;9.62e-23;18!CL:0000542;1.13e-20;53!CL:0000624;1.73e-18;6!CL:0000784;1.79e-15;3!CL:0000945;2.87e-14;24!CL:0000625;7.51e-10;11!CL:0000451;3.99e-07;10!CL:0000898;8.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.25e-40,53;CL:0000051,7.25e-40,53;CL:0000838,3.73e-37,52;CL:0000084,2.07e-27,25;CL:0000827,2.07e-27,25;CL:0000791,1.36e-22,18;CL:0000789,1.36e-22,18;CL:0002420,1.36e-22,18;CL:0002419,1.36e-22,18;CL:0000790,1.36e-22,18;CL:0000738,7.91e-20,136;CL:0000037,3.81e-19,168;CL:0000624,2.09e-18,6;CL:0000988,7.92e-18,177;CL:0002087,5.30e-17,115;CL:0002032,1.32e-15,161;CL:0000837,1.32e-15,161;CL:0000784,1.84e-15,3;CL:0002031,1.39e-14,120;CL:0000945,3.10e-14,24;CL:0000826,3.10e-14,24;CL:0000625,8.96e-10,11;CL:0000451,4.29e-07,10;CL:0000817,7.58e-07,3;CL:0000898,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.62e-23;18!CL:0000051;1.13e-20;53 | |||
|ontology_enrichment_disease=DOID:2531!1.75e-18!51;DOID:0060083!1.75e-18!51;DOID:1240!1.38e-12!39;DOID:8692!5.36e-09!31;DOID:0060058!1.66e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.08e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.47e-09,51;DOID:0060083,9.47e-09,51;DOID:0060058,1.04e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-10!102;UBERON:0003061!2.51e-10!102;UBERON:0002193!5.25e-10!112;UBERON:0000178!1.95e-08!15;UBERON:0000179!1.95e-08!15;UBERON:0000463!1.95e-08!15;UBERON:0004177!4.05e-08!7;UBERON:0002384!6.22e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.93e-11;2!UBERON:0005058;3.93e-11;2!UBERON:0009113;3.93e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-11,4;UBERON:0005058,2.17e-11,4;UBERON:0009113,2.17e-11,4;UBERON:0003295,2.17e-11,4;UBERON:0005562,2.17e-11,4;UBERON:0003351,9.87e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51501666440576,3.28402357799783,4.09296062831132,0.393364276848904,0,0.309632246632152,0,0,0,2.63388481973026,1.56386155736164,0,0,0,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,2.64342657158052,0.560508562981536,0.263384084775077,1.37696839079683,2.35806457649499,1.02800749499755,0.167186495390678,1.95553359980154,3.31413464014313,1.94826728407911,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0,0.260118695119756,0.164437904603676,0.552700035571697,1.44901542867526,1.77943875794473,2.67540828089713,2.09071047609954,0.113309342697566,1.14966148080576,0.68725489096526,0.759059076058509,1.27426165729639,0,0,1.05402583354441,1.66382594500744,1.24930726552346,0,0.821127996921047,0.604820229674197,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,5.96226560763355,4.0039643754609,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,11.9195036841956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,1.19115887728894,0,0,0,0.79312517629427,0,0,0,1.11481905075431,1.00988449083511,15.8646310666963,1.91311527274587,1.99579371432817,0.5745161103971,0.635020748171649,0.324621940274555,2.24637742490767,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0.811367035427949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,2.95403533106567,0,0,0,0.511572370226872,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,2.04386596391473,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,2.18945747058799,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,1.19578356282027,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.806637912890455,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.375935671919414,0.515663103788617,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,53.7379729835571,42.397029864071,0,0,0,0,0,0.5388164241167,0,0,0,0.106727345877715,0,0,0,0,0,0,6.44076139491284,2.24397944612263 | |||
|short_description=p6@APBB1IP | |||
}} |
Revision as of 02:15, 11 January 2014
Short description: | p6@APBB1IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APBB1IP_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000445780_5end |
EntrezGene: | APBB1IP |
HGNC: | 17379 |
UniProt: | B4E100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.25e-40 | 53 |
common lymphoid progenitor | 7.25e-40 | 53 |
lymphoid lineage restricted progenitor cell | 3.73e-37 | 52 |
T cell | 2.07e-27 | 25 |
pro-T cell | 2.07e-27 | 25 |
mature alpha-beta T cell | 1.36e-22 | 18 |
alpha-beta T cell | 1.36e-22 | 18 |
immature T cell | 1.36e-22 | 18 |
mature T cell | 1.36e-22 | 18 |
immature alpha-beta T cell | 1.36e-22 | 18 |
leukocyte | 7.91e-20 | 136 |
hematopoietic stem cell | 3.81e-19 | 168 |
CD4-positive, alpha-beta T cell | 2.09e-18 | 6 |
hematopoietic cell | 7.92e-18 | 177 |
nongranular leukocyte | 5.30e-17 | 115 |
hematopoietic oligopotent progenitor cell | 1.32e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-15 | 161 |
plasmacytoid dendritic cell | 1.84e-15 | 3 |
hematopoietic lineage restricted progenitor cell | 1.39e-14 | 120 |
lymphocyte of B lineage | 3.10e-14 | 24 |
pro-B cell | 3.10e-14 | 24 |
CD8-positive, alpha-beta T cell | 8.96e-10 | 11 |
dendritic cell | 4.29e-07 | 10 |
precursor B cell | 7.58e-07 | 3 |
naive T cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.17e-11 | 4 |
hemolymphoid system gland | 2.17e-11 | 4 |
thymic region | 2.17e-11 | 4 |
pharyngeal gland | 2.17e-11 | 4 |
thymus primordium | 2.17e-11 | 4 |
pharyngeal epithelium | 9.87e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.47e-09 | 51 |
immune system cancer | 9.47e-09 | 51 |
lymphoma | 1.04e-07 | 10 |