FFCP PHASE1:Hg19::chr11:57185250..57185263,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:57185250..57185263,- | |||
|id=chr11:57185250..57185263,- | |||
|ontology_enrichment_celltype=CL:0002057!1.03e-15!42;CL:0000860!1.17e-13!45;CL:0000839!4.50e-13!70;CL:0000763!1.00e-11!112;CL:0000049!1.00e-11!112;CL:0000557!4.47e-11!71;CL:0002194!4.52e-11!63;CL:0000576!4.52e-11!63;CL:0000040!4.52e-11!63;CL:0000559!4.52e-11!63;CL:0002009!2.94e-10!65;CL:0000766!9.91e-10!76;CL:0000219!1.58e-09!390;CL:0002032!2.51e-08!165;CL:0000837!2.51e-08!165;CL:0002320!3.25e-08!365;CL:0000134!7.50e-08!358;CL:0000723!1.02e-07!436;CL:0000048!1.38e-07!430;CL:0002031!2.38e-07!124;CL:0000034!3.28e-07!444;CL:0000037!4.61e-07!172;CL:0000566!4.61e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-30;33!CL:0002057;5.96e-30;33!CL:0000473;1.02e-22;39!CL:0000234;1.02e-22;39!CL:0000576;1.29e-14;48!CL:0000766;3.71e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.73e-25,42;CL:0002057,7.73e-25,42;CL:0000473,6.92e-24,48;CL:0000234,6.92e-24,48;CL:0002194,3.78e-18,59;CL:0000576,3.78e-18,59;CL:0000040,3.78e-18,59;CL:0000559,3.78e-18,59;CL:0002009,2.07e-17,61;CL:0000839,9.29e-16,66;CL:0000557,1.86e-15,67;CL:0000766,4.44e-14,72;CL:0000763,9.68e-14,108;CL:0000049,9.68e-14,108;CL:0002032,2.74e-08,161;CL:0000837,2.74e-08,161;CL:0002087,3.30e-08,115;CL:0000037,1.03e-07,168;CL:0002031,1.11e-07,120;CL:0000988,4.82e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.81e-19;42!UBERON:0008947;7.62e-07;29 | |||
|ontology_enrichment_disease=DOID:1240!3.72e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.94e-11!80;UBERON:0002405!3.70e-09!115;UBERON:0001474!8.53e-09!86;UBERON:0002390!1.15e-08!102;UBERON:0003061!1.15e-08!102;UBERON:0001737!1.43e-08!9;UBERON:0002193!1.97e-08!112;UBERON:0002384!1.32e-07!375;UBERON:0001557!6.92e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.84e-25;9!UBERON:0001557;5.84e-25;9!UBERON:0000072;3.10e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.27e-26,9;UBERON:0002371,4.15e-13,76;UBERON:0001474,7.88e-12,82;UBERON:0001557,1.48e-11,19;UBERON:0002405,3.66e-11,93;UBERON:0004765,2.15e-10,90;UBERON:0002390,3.38e-09,98;UBERON:0003061,3.38e-09,98;UBERON:0002193,5.53e-09,108;UBERON:0001434,6.28e-09,100;UBERON:0008947,6.90e-08,38;UBERON:0003258,6.90e-08,38 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0.246242116153576,0.408001382488506,0,0,0,0,0.764134057479513,0.656804715599566,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0.77272670290256,1.74477886535478,0.377875943688809,0.970336244751265,1.16214518452842,2.05583944010913,1.23882548358041,1.43846196161075,0.256160706529101,1.6553756092201,0,3.22742341791913,2.70852973188684,2.07066573496865,1.91034305040492,2.02251136000576,3.67300670845083,0.962787081228281,0.639337125799041,0.659702600373432,0.797854630486527,0,1.45104619314292,0.56738522469114,3.73693349397345,1.50749199154046,0.521482918420201,1.08594422352558,3.02699751316684,1.84138817993782,0.949387162322653,0.211255286311942,0,0,0,0.300353785683013,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,1.25849830862972,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.625098097988558,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.448346041655403,1.05691048779388,0.809364721840658,0.421352420106746,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,1.43723628363248,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0.717558542755448,0.213557388818567,0,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.302256294682921,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0.721879481669586,1.53798840051797,1.85443159085912,1.44606617930089,1.54411561825352,1.96091499683166,2.37270619111097,0.808987848960987,1.56977172100277,2.30848294167834,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0.109750285408626,0,0.502644862058154,0,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0.432359860250884,0.25248486685276,0.571481048629521,0.763976851116555,1.17217447210047,3.4214489204541,2.87916979569306,2.10240140490742,0.857479297891735,0,0,0,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0.199945982364114,2.43247561282381,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,1.48418066444991,0,0,0.410635780069046,0.519254429183621,0.697262270759755,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.671624264166535,0.438519753291869,0.522870902049801,0,0,0.325378394664303,0.515205058238611,0,0,0,0,0,0.386682873168488,0.154048617114644,1.07452572308291,0.689182862422653,0.537101224341368,0.435050081742686,0.255679882248303,0.0890320356467374,0.165284915360978,0.384380134730212,0,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0,2.19342140668156,0,0,0.141405431953713,0,0.551365343546124,0,0,0,1.31178950409327,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,1.08890984861323,0.659006605437454,0,0,0,0,0.507447609232169,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.142283686696828,0.318852545457645,0.997896857164083,0,1.48171507906718,0.324621940274555,0.280797178113459,0,1.41011906195721,0,0,0.802940375518498,0.80719882876419,0.425846237690326,1.37402137902306,0.307240764308458,0.223676107892416,0.500547425135725,1.17232857241224,0.556812347790485,0,1.08182271390393,0,0,0.18714054040822,0.439524537815682,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0.111308705022906,0.659215496907038,0,0,0,0.251932747854276,0,0.369254416383208,0,0.359473404589307,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0,0,0,0,0,0.533034776018635,2.04386596391473,0.156980256395025,0.664846727600626,0.225595660617181,0.19606253431774,0.671286347903371,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0.208843899010911,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0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| |||
|short_description=p@chr11:57185250..57185263,- | |||
}} |
Revision as of 07:44, 11 January 2014
Short description: | p@chr11:57185250..57185263, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57185250..57185263, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.73e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.73e-25 | 42 |
defensive cell | 6.92e-24 | 48 |
phagocyte | 6.92e-24 | 48 |
monopoietic cell | 3.78e-18 | 59 |
monocyte | 3.78e-18 | 59 |
monoblast | 3.78e-18 | 59 |
promonocyte | 3.78e-18 | 59 |
macrophage dendritic cell progenitor | 2.07e-17 | 61 |
myeloid lineage restricted progenitor cell | 9.29e-16 | 66 |
granulocyte monocyte progenitor cell | 1.86e-15 | 67 |
myeloid leukocyte | 4.44e-14 | 72 |
myeloid cell | 9.68e-14 | 108 |
common myeloid progenitor | 9.68e-14 | 108 |
hematopoietic oligopotent progenitor cell | 2.74e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-08 | 161 |
nongranular leukocyte | 3.30e-08 | 115 |
hematopoietic stem cell | 1.03e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 1.11e-07 | 120 |
hematopoietic cell | 4.82e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.27e-26 | 9 |
bone marrow | 4.15e-13 | 76 |
bone element | 7.88e-12 | 82 |
upper respiratory tract | 1.48e-11 | 19 |
immune system | 3.66e-11 | 93 |
skeletal element | 2.15e-10 | 90 |
hematopoietic system | 3.38e-09 | 98 |
blood island | 3.38e-09 | 98 |
hemolymphoid system | 5.53e-09 | 108 |
skeletal system | 6.28e-09 | 100 |
respiratory primordium | 6.90e-08 | 38 |
endoderm of foregut | 6.90e-08 | 38 |