FFCP PHASE1:Hg19::chr11:60050026..60050037,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13371 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_uc001npb.2_5end | |||
|coexpression_cluster_id=C2073 | |||
|description=CAGE_peak_5_at_MS4A4A_5end | |||
|id=chr11:60050026..60050037,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.67e-59!42;CL:0002194!2.47e-58!63;CL:0000576!2.47e-58!63;CL:0000040!2.47e-58!63;CL:0000559!2.47e-58!63;CL:0002009!4.07e-56!65;CL:0000766!1.02e-55!76;CL:0000860!1.56e-54!45;CL:0000839!2.20e-53!70;CL:0000557!1.96e-52!71;CL:0000763!5.14e-33!112;CL:0000049!5.14e-33!112;CL:0000738!1.97e-28!140;CL:0002087!2.15e-28!119;CL:0002031!2.49e-25!124;CL:0000037!2.76e-20!172;CL:0000566!2.76e-20!172;CL:0002032!9.54e-19!165;CL:0000837!9.54e-19!165;CL:0000988!2.39e-18!182;CL:0002393!2.05e-07!9;CL:0002397!2.05e-07!9;CL:0000767!2.86e-07!3;CL:0002619!5.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-44;33!CL:0002057;4.35e-44;33!CL:0000473;3.63e-43;39!CL:0000234;3.63e-43;39!CL:0000576;5.25e-29;48!CL:0000766;1.54e-23;69!CL:0000767;3.33e-14;3!CL:0000763;1.65e-11;100!CL:0002087;5.14e-09;104!CL:0000235;8.23e-08;6!CL:0000738;1.11e-07;136!CL:0002619;2.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.12e-56,59;CL:0000576,1.12e-56,59;CL:0000040,1.12e-56,59;CL:0000559,1.12e-56,59;CL:0000766,2.09e-56,72;CL:0002009,1.21e-54,61;CL:0000473,3.51e-52,48;CL:0000234,3.51e-52,48;CL:0000839,4.36e-50,66;CL:0000557,2.95e-49,67;CL:0000860,1.25e-45,42;CL:0002057,1.25e-45,42;CL:0000763,1.66e-35,108;CL:0000049,1.66e-35,108;CL:0000738,7.74e-27,136;CL:0002087,3.23e-26,115;CL:0002031,7.21e-25,120;CL:0002032,1.25e-21,161;CL:0000837,1.25e-21,161;CL:0000037,1.90e-20,168;CL:0000988,4.58e-19,177;CL:0000767,1.87e-14,3;CL:0000235,9.04e-08,6;CL:0002619,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.20e-33;42!CL:0000049;2.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.94e-45!80;UBERON:0001474!7.81e-41!86;UBERON:0002390!8.27e-41!102;UBERON:0003061!8.27e-41!102;UBERON:0002193!3.98e-39!112;UBERON:0002405!4.83e-36!115;UBERON:0004765!2.99e-34!101;UBERON:0001434!2.99e-34!101;UBERON:0002204!5.77e-18!167;UBERON:0003081!3.74e-16!216;UBERON:0007023!2.70e-10!115;UBERON:0000062!1.00e-09!511;UBERON:0002308!4.27e-09!9;UBERON:0000125!4.27e-09!9;UBERON:0002420!5.15e-07!9;UBERON:0007245!5.15e-07!9;UBERON:0010009!5.15e-07!9;UBERON:0010011!5.15e-07!9;UBERON:0000454!5.15e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.49e-43,76;UBERON:0002405,2.81e-39,93;UBERON:0001474,3.40e-39,82;UBERON:0004765,3.49e-35,90;UBERON:0002390,2.47e-34,98;UBERON:0003061,2.47e-34,98;UBERON:0002193,6.06e-33,108;UBERON:0001434,4.59e-31,100;UBERON:0002204,4.00e-16,167;UBERON:0003081,1.53e-14,203;UBERON:0000926,4.67e-07,315;UBERON:0004120,4.67e-07,315;UBERON:0006603,4.67e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,1.70297735647684,0,0,0,0,0,0,4.43196326825502,2.4065333696417,0.868043482863407,2.91090116511902,0.32389366601898,3.34848237924443,0.872389432677388,0.755751887377619,0.970336244751265,2.55671940596253,2.46700732813095,4.02618282163635,0.863077176966451,0.768482119587302,0.47296445977717,11.0318617835718,12.9096936716765,10.8341189275473,2.44715041405386,3.0019676506363,3.82029923556644,9.18251677112708,7.70229664982625,12.1474053901818,0,0.398927315243264,0.426224750532694,2.61188314765726,2.26954089876456,1.24564449799115,0.75374599577023,0.521482918420201,1.95469960234605,1.81619850790011,3.68277635987565,5.06339819905415,0.211255286311942,0,0.209658645508376,0.336985893439485,0.450530678524519,0,0,0.59675003159727,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,2.61194605948901,12.4980482887733,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20082107913617,2.34004265139238,6.8370334652815,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,1.11585728720936,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,1.06787412567695,0,1.24271716604159,1.48849806543585,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,1.14681839138014,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0.535701835878287,0,0.606965604236632,0,7.27359435333638,0,0,0,0,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0,0,1.37415926980462,0,0,0,1.4097587696978,0.773494655682926,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0,0,0,0,0.248298857183432,0,0.0636471582781649,0,0,0,0.0673520530145875,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@MS4A4A | |||
}} |
Revision as of 07:53, 11 January 2014
Short description: | p5@MS4A4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MS4A4A_5end |
Coexpression cluster: | C2073_Macrophage_Dendritic_CD14_Monocytederived_acute_placenta_mesenchymal |
Association with transcript: | -29bp_to_uc001npb.2_5end |
EntrezGene: | MS4A4A |
HGNC: | 13371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.12e-56 | 59 |
monocyte | 1.12e-56 | 59 |
monoblast | 1.12e-56 | 59 |
promonocyte | 1.12e-56 | 59 |
myeloid leukocyte | 2.09e-56 | 72 |
macrophage dendritic cell progenitor | 1.21e-54 | 61 |
defensive cell | 3.51e-52 | 48 |
phagocyte | 3.51e-52 | 48 |
myeloid lineage restricted progenitor cell | 4.36e-50 | 66 |
granulocyte monocyte progenitor cell | 2.95e-49 | 67 |
classical monocyte | 1.25e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-45 | 42 |
myeloid cell | 1.66e-35 | 108 |
common myeloid progenitor | 1.66e-35 | 108 |
leukocyte | 7.74e-27 | 136 |
nongranular leukocyte | 3.23e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 7.21e-25 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-21 | 161 |
hematopoietic stem cell | 1.90e-20 | 168 |
hematopoietic cell | 4.58e-19 | 177 |
basophil | 1.87e-14 | 3 |
macrophage | 9.04e-08 | 6 |
adult endothelial progenitor cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.49e-43 | 76 |
immune system | 2.81e-39 | 93 |
bone element | 3.40e-39 | 82 |
skeletal element | 3.49e-35 | 90 |
hematopoietic system | 2.47e-34 | 98 |
blood island | 2.47e-34 | 98 |
hemolymphoid system | 6.06e-33 | 108 |
skeletal system | 4.59e-31 | 100 |
musculoskeletal system | 4.00e-16 | 167 |
lateral plate mesoderm | 1.53e-14 | 203 |
mesoderm | 4.67e-07 | 315 |
mesoderm-derived structure | 4.67e-07 | 315 |
presumptive mesoderm | 4.67e-07 | 315 |