FFCP PHASE1:Hg19::chr14:100704847..100704859,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000554537_5end | |||
|description=CAGE_peak_5_at_ENST00000554537_5end | |||
|id=chr14:100704847..100704859,- | |||
|ontology_enrichment_celltype=CL:0000860!2.76e-24!45;CL:0002057!2.34e-23!42;CL:0000037!1.41e-22!172;CL:0000566!1.41e-22!172;CL:0002087!2.35e-21!119;CL:0000988!4.08e-21!182;CL:0000738!5.30e-21!140;CL:0002032!2.33e-19!165;CL:0000837!2.33e-19!165;CL:0002031!2.43e-19!124;CL:0000557!3.07e-16!71;CL:0002009!4.55e-16!65;CL:0002194!3.56e-15!63;CL:0000576!3.56e-15!63;CL:0000040!3.56e-15!63;CL:0000559!3.56e-15!63;CL:0000839!8.73e-14!70;CL:0000763!1.47e-13!112;CL:0000049!1.47e-13!112;CL:0000766!7.40e-13!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.86e-35;33!CL:0002057;8.86e-35;33!CL:0000473;8.43e-24;39!CL:0000234;8.43e-24;39!CL:0000576;5.34e-21;48!CL:0000766;4.84e-12;69!CL:0002087;1.54e-10;104!CL:0000540;2.89e-10;6!CL:0000404;2.89e-10;6!CL:0000763;6.93e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.64e-38,42;CL:0002057,4.64e-38,42;CL:0000473,1.38e-32,48;CL:0000234,1.38e-32,48;CL:0002194,6.23e-25,59;CL:0000576,6.23e-25,59;CL:0000040,6.23e-25,59;CL:0000559,6.23e-25,59;CL:0002009,6.04e-24,61;CL:0000557,1.66e-23,67;CL:0002087,2.17e-23,115;CL:0002031,4.18e-22,120;CL:0000839,9.71e-22,66;CL:0000738,9.96e-22,136;CL:0000766,1.54e-21,72;CL:0000037,5.23e-20,168;CL:0000988,1.47e-18,177;CL:0002032,2.01e-18,161;CL:0000837,2.01e-18,161;CL:0000763,2.89e-15,108;CL:0000049,2.89e-15,108;CL:0000540,1.33e-10,6;CL:0000031,1.33e-10,6;CL:0000404,1.33e-10,6;CL:0000047,5.95e-08,8;CL:0000048,5.03e-07,427;CL:0000723,8.55e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.10e-24;42!CL:0000031;2.89e-10;6 | |||
|ontology_enrichment_disease=DOID:162!2.27e-10!235;DOID:14566!1.11e-09!239;DOID:0050687!2.55e-08!143;DOID:305!9.65e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.64e-14!80;UBERON:0002390!4.38e-13!102;UBERON:0003061!4.38e-13!102;UBERON:0001474!1.43e-12!86;UBERON:0002193!7.64e-12!112;UBERON:0002405!6.18e-10!115;UBERON:0004765!1.98e-09!101;UBERON:0001434!1.98e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.97e-22,76;UBERON:0002405,3.05e-20,93;UBERON:0001474,5.34e-20,82;UBERON:0002390,4.88e-19,98;UBERON:0003061,4.88e-19,98;UBERON:0002193,3.57e-18,108;UBERON:0004765,1.04e-17,90;UBERON:0001434,2.28e-15,100;UBERON:0002204,8.28e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0,0,0,0.383829398097213,0,0,0.30120591877825,0,0.232401601740905,0.284338464974843,1.17440175733939,1.10799081706375,0.200544447470142,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,1.21292030593908,0.697287110717054,0.411167888021826,4.64559556342655,1.1507695692886,1.7931249457037,0.945928919554341,2.06847408441971,1.29096936716765,0,0.941211697713023,1.36453075028923,0.898893937780338,3.97909060082173,3.85114832491312,3.83602275479425,0.989553900560148,0.797854630486527,1.27867425159808,2.61188314765726,1.13477044938228,2.4912889959823,1.7587406567972,0,1.08594422352558,7.87019353423379,3.31449872388808,3.48108626184973,0.633765858935825,1.70083439972035,0.628975936525128,0.112328631146495,0.150176892841506,0.32145117339416,0.570025487482497,1.39241674039363,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0.393419540227666,1.96505381374582,2.67281948699362,0.334372990781356,0,0.946895611469467,0,0.111410456885174,0.589211814949674,0.221533894583621,0.812411591295047,0.640456598628376,0.520237390239513,0.164437904603676,1.10540007114339,0,0.14828656316206,0,0,0.226618685395132,1.14966148080576,1.03088233644789,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0,0,0.473554504088034,0,1.20964045934839,2.40696176205157,0.724122019413995,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0.348259474598534,0.132957960518865,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0.347140501607594,0,0.838998872419812,0,0,0,0.35576626268671,1.00416183829401,0,0,0.24406205754817,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0.355009592516614,0.201504196455281,0,0,0,0,0.487894824518382,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,1.26755034821831,0,0,1.7658523976586,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29243081047436,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0.414656231081544,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0.112085143993527,1.57624608161542,2.58753089831421,0.77005821767849,0,0,0,0,1.91381625495949,1.49801404789436,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0.620304078368662,0.862856803274467,0.960548020230999,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0.267096106940212,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0,0,0.371606350251437,0.28853842595289,0.142283686696828,0.797131363644112,0.199579371432817,0,0.211673582723883,0,0.561594356226918,0.684704037099577,0.313359791546046,0,0.846458889008016,0,0.201799707191048,0.425846237690326,0,0,0.671028323677248,0.166849141711909,0,0.278406173895242,0,0,0.66614393599564,1.4098700508785,0,0,0.121360521749513,0,0.284136146806413,0.71623345421307,0,0.614321404198464,0,0.140669416410513,0.333926115068718,0.16480387422676,0.63337622438398,0,0,0.503865495708552,0.102268682502155,1.10776324914963,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,1.30213880542617,0.0874599999961957,0,0,0,0,0.689486746482929,1.45802306691627,0.694499979733169,0,0.120596438625408,0,0.110579259931225,0,0,0,0.41827123283581,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0.451191321234361,0,0.167821586975843,0.75901493089674,0.317873157960757,0,0.163232808159148,0.282706142867882,0,0,0,0,0.593042257361244,0,0,0,0.802577647298789,0,0.729819156862664,0.782658475728359,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,0,0.489961987071888,0,0,0.171986032471617,0.580537987734511,0.365446585430928,0.246346371159628,0.0969890164884194,0,0,0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| |||
|short_description=p5@ENST00000554537 | |||
}} |
Revision as of 21:54, 11 January 2014
Short description: | p5@ENST00000554537 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ENST00000554537_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_ENST00000554537_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.64e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-38 | 42 |
defensive cell | 1.38e-32 | 48 |
phagocyte | 1.38e-32 | 48 |
monopoietic cell | 6.23e-25 | 59 |
monocyte | 6.23e-25 | 59 |
monoblast | 6.23e-25 | 59 |
promonocyte | 6.23e-25 | 59 |
macrophage dendritic cell progenitor | 6.04e-24 | 61 |
granulocyte monocyte progenitor cell | 1.66e-23 | 67 |
nongranular leukocyte | 2.17e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 4.18e-22 | 120 |
myeloid lineage restricted progenitor cell | 9.71e-22 | 66 |
leukocyte | 9.96e-22 | 136 |
myeloid leukocyte | 1.54e-21 | 72 |
hematopoietic stem cell | 5.23e-20 | 168 |
hematopoietic cell | 1.47e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.01e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-18 | 161 |
myeloid cell | 2.89e-15 | 108 |
common myeloid progenitor | 2.89e-15 | 108 |
neuron | 1.33e-10 | 6 |
neuroblast | 1.33e-10 | 6 |
electrically signaling cell | 1.33e-10 | 6 |
neuronal stem cell | 5.95e-08 | 8 |
multi fate stem cell | 5.03e-07 | 427 |
somatic stem cell | 8.55e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.97e-22 | 76 |
immune system | 3.05e-20 | 93 |
bone element | 5.34e-20 | 82 |
hematopoietic system | 4.88e-19 | 98 |
blood island | 4.88e-19 | 98 |
hemolymphoid system | 3.57e-18 | 108 |
skeletal element | 1.04e-17 | 90 |
skeletal system | 2.28e-15 | 100 |
musculoskeletal system | 8.28e-08 | 167 |