FFCP PHASE1:Hg19::chr16:27343504..27343525,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr16:27343504..27343525,- | |||
|id=chr16:27343504..27343525,- | |||
|ontology_enrichment_celltype=CL:0002057!7.69e-33!42;CL:0000860!2.45e-30!45;CL:0000839!5.81e-27!70;CL:0000766!7.54e-27!76;CL:0000557!1.65e-26!71;CL:0002194!6.03e-20!63;CL:0000576!6.03e-20!63;CL:0000040!6.03e-20!63;CL:0000559!6.03e-20!63;CL:0002009!3.35e-19!65;CL:0000763!1.99e-16!112;CL:0000049!1.99e-16!112;CL:0002274!1.37e-14!5;CL:0000457!1.37e-14!5;CL:0002191!1.37e-14!5;CL:0000097!1.37e-14!5;CL:0000831!1.37e-14!5;CL:0002028!1.37e-14!5;CL:0002031!6.64e-13!124;CL:0000738!4.94e-12!140;CL:0002032!2.20e-09!165;CL:0000837!2.20e-09!165;CL:0000037!8.74e-09!172;CL:0000566!8.74e-09!172;CL:0002087!1.45e-08!119;CL:0000163!4.04e-08!9;CL:0000988!5.19e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000097;9.69e-37;5!CL:0000163;8.88e-21;9!CL:0000860;1.32e-12;33!CL:0002057;1.32e-12;33!CL:0000473;2.00e-10;39!CL:0000234;2.00e-10;39!CL:0000766;3.91e-09;69!CL:0000576;8.51e-08;48!CL:0000763;2.90e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.70e-37,5;CL:0002028,9.70e-37,5;CL:0000163,8.88e-21,9;CL:0000839,1.17e-18,66;CL:0000557,2.22e-18,67;CL:0000766,4.20e-17,72;CL:0000860,6.63e-12,42;CL:0002057,6.63e-12,42;CL:0000763,2.41e-11,108;CL:0000049,2.41e-11,108;CL:0000473,1.97e-10,48;CL:0000234,1.97e-10,48;CL:0002031,3.52e-10,120;CL:0000738,6.11e-09,136;CL:0002194,2.31e-08,59;CL:0000576,2.31e-08,59;CL:0000040,2.31e-08,59;CL:0000559,2.31e-08,59;CL:0002009,4.28e-08,61;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.70e-07,168;CL:0000988,9.05e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.23e-23!80;UBERON:0001474!5.82e-21!86;UBERON:0004765!4.69e-17!101;UBERON:0001434!4.69e-17!101;UBERON:0002390!7.78e-17!102;UBERON:0003061!7.78e-17!102;UBERON:0002405!6.83e-16!115;UBERON:0002193!7.43e-15!112;UBERON:0001875!1.79e-09!2;UBERON:0006514!1.79e-09!2;UBERON:0002204!3.75e-09!167;UBERON:0002420!1.36e-07!9;UBERON:0007245!1.36e-07!9;UBERON:0010009!1.36e-07!9;UBERON:0010011!1.36e-07!9;UBERON:0000454!1.36e-07!9;UBERON:0002308!1.41e-07!9;UBERON:0000125!1.41e-07!9;UBERON:0003081!1.97e-07!216;UBERON:0007023!2.22e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;5.71e-21;1!UBERON:0002133;3.52e-11;2!UBERON:0003978;7.02e-08;3!UBERON:0000946;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,7.72e-21,1;UBERON:0002371,3.37e-16,76;UBERON:0001474,5.25e-15,82;UBERON:0004765,1.17e-13,90;UBERON:0002405,3.27e-13,93;UBERON:0002390,1.58e-12,98;UBERON:0003061,1.58e-12,98;UBERON:0001434,2.85e-12,100;UBERON:0002193,2.41e-11,108;UBERON:0002133,4.09e-11,2;UBERON:0003978,7.76e-08,3;UBERON:0009751,7.76e-08,3;UBERON:0000946,7.76e-08,3;UBERON:0002523,7.76e-08,3;UBERON:0005983,7.76e-08,3;UBERON:0002165,7.76e-08,3;UBERON:0002062,7.76e-08,3;UBERON:0007280,7.76e-08,3;UBERON:0003081,1.97e-07,203;UBERON:0002204,3.34e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0,0,0.619412741790207,1.43846196161075,0,0.236482229888585,1.03423704220986,0.645484683583826,0,0,0,0,0.612167784741805,0,2.55734850319616,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,1.7587406567972,1.5644487552606,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,13.683655625691,7.49423757768199,5.80715193761348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,1.11712960508902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:27343504..27343525,- | |||
}} |
Revision as of 02:54, 12 January 2014
Short description: | p@chr16:27343504..27343525, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:27343504..27343525, - |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.70e-37 | 5 |
basophil mast progenitor cell | 9.70e-37 | 5 |
endocrine cell | 8.88e-21 | 9 |
myeloid lineage restricted progenitor cell | 1.17e-18 | 66 |
granulocyte monocyte progenitor cell | 2.22e-18 | 67 |
myeloid leukocyte | 4.20e-17 | 72 |
classical monocyte | 6.63e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.63e-12 | 42 |
myeloid cell | 2.41e-11 | 108 |
common myeloid progenitor | 2.41e-11 | 108 |
defensive cell | 1.97e-10 | 48 |
phagocyte | 1.97e-10 | 48 |
hematopoietic lineage restricted progenitor cell | 3.52e-10 | 120 |
leukocyte | 6.11e-09 | 136 |
monopoietic cell | 2.31e-08 | 59 |
monocyte | 2.31e-08 | 59 |
monoblast | 2.31e-08 | 59 |
promonocyte | 2.31e-08 | 59 |
macrophage dendritic cell progenitor | 4.28e-08 | 61 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 9.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 7.72e-21 | 1 |
bone marrow | 3.37e-16 | 76 |
bone element | 5.25e-15 | 82 |
skeletal element | 1.17e-13 | 90 |
immune system | 3.27e-13 | 93 |
hematopoietic system | 1.58e-12 | 98 |
blood island | 1.58e-12 | 98 |
skeletal system | 2.85e-12 | 100 |
hemolymphoid system | 2.41e-11 | 108 |
atrioventricular valve | 4.09e-11 | 2 |
valve | 7.76e-08 | 3 |
cardiac mesenchyme | 7.76e-08 | 3 |
cardial valve | 7.76e-08 | 3 |
tunica intima | 7.76e-08 | 3 |
heart layer | 7.76e-08 | 3 |
endocardium | 7.76e-08 | 3 |
endocardial cushion | 7.76e-08 | 3 |
presumptive endocardium | 7.76e-08 | 3 |
lateral plate mesoderm | 1.97e-07 | 203 |
musculoskeletal system | 3.34e-07 | 167 |