FFCP PHASE1:Hg19::chr16:52580953..52580992,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11972 | |||
|TSSclassifier=strong | |||
|UniProt=O15405,B4DRD0 | |||
|association_with_transcript=-147bp_to_ENST00000219746,NM_001080430,uc002egw.2,uc010vgu.1_5end | |||
|description=CAGE_peak_2_at_TOX3_5end | |||
|id=chr16:52580953..52580992,- | |||
|ontology_enrichment_celltype=CL:0002319!9.40e-10!25;CL:0000047!9.56e-10!8;CL:0000540!3.20e-07!6;CL:0000031!3.20e-07!6;CL:0000404!3.20e-07!6;CL:0002322!6.07e-07!5;CL:0000133!9.63e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.60e-14;12!CL:0002605;9.81e-11;3!CL:0000047;5.77e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.81e-14,12;CL:0002605,9.18e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.60e-12;11!UBERON:0009497;8.01e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.69e-23!82;UBERON:0005743!2.31e-22!86;UBERON:0000073!7.00e-22!94;UBERON:0001016!7.00e-22!94;UBERON:0007023!2.78e-19!115;UBERON:0001049!6.12e-18!57;UBERON:0005068!6.12e-18!57;UBERON:0006241!6.12e-18!57;UBERON:0007135!6.12e-18!57;UBERON:0002780!1.66e-16!41;UBERON:0001890!1.66e-16!41;UBERON:0006240!1.66e-16!41;UBERON:0003080!6.43e-16!42;UBERON:0000955!1.52e-15!69;UBERON:0006238!1.52e-15!69;UBERON:0002020!2.55e-15!34;UBERON:0003528!2.55e-15!34;UBERON:0001893!2.84e-15!34;UBERON:0002616!1.00e-14!59;UBERON:0000956!1.25e-14!25;UBERON:0000203!1.25e-14!25;UBERON:0002791!1.46e-14!33;UBERON:0001869!6.17e-14!32;UBERON:0002346!1.38e-13!90;UBERON:0003075!5.63e-13!86;UBERON:0007284!5.63e-13!86;UBERON:0003056!7.42e-13!61;UBERON:0000924!1.55e-12!173;UBERON:0006601!1.55e-12!173;UBERON:0004121!6.04e-12!169;UBERON:0001950!1.34e-11!20;UBERON:0002619!1.73e-11!22;UBERON:0000153!1.24e-09!129;UBERON:0007811!1.24e-09!129;UBERON:0004921!1.48e-09!129;UBERON:0004185!1.48e-09!129;UBERON:0000033!2.33e-09!123;UBERON:0000922!4.34e-09!612;UBERON:0000481!6.47e-09!347;UBERON:0000025!9.17e-08!194;UBERON:0000468!1.34e-07!659;UBERON:0000062!1.93e-07!511;UBERON:0000475!4.17e-07!365;UBERON:0005409!5.86e-07!35;UBERON:0002050!8.02e-07!605;UBERON:0005423!8.02e-07!605;UBERON:0005177!8.47e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.27e-13;22!UBERON:0000160;2.25e-11;17!UBERON:0004921;3.69e-11;33!UBERON:0002107;5.43e-11;19!UBERON:0006925;5.43e-11;19!UBERON:0002423;3.52e-10;25!UBERON:0002365;3.69e-09;31!UBERON:0002330;3.69e-09;31!UBERON:0000956;2.39e-07;25!UBERON:0000203;2.39e-07;25!UBERON:0002368;3.03e-07;33!UBERON:0002108;5.14e-07;4!UBERON:0000922;5.74e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.41e-12,118;UBERON:0005409,7.20e-12,25;UBERON:0011216,1.94e-11,223;UBERON:0000160,2.09e-11,17;UBERON:0009854,4.52e-11,23;UBERON:0002107,4.64e-11,19;UBERON:0006925,4.64e-11,19;UBERON:0008836,4.64e-11,19;UBERON:0009497,3.02e-10,25;UBERON:0000015,3.02e-10,25;UBERON:0002423,3.02e-10,25;UBERON:0006235,3.02e-10,25;UBERON:0004161,3.02e-10,25;UBERON:0001007,5.91e-10,145;UBERON:0001555,5.91e-10,145;UBERON:0007026,5.91e-10,145;UBERON:0009856,1.34e-09,26;UBERON:0002365,1.56e-09,31;UBERON:0002330,1.56e-09,31;UBERON:0008835,2.31e-09,22;UBERON:0003894,2.31e-09,22;UBERON:0004119,1.82e-08,160;UBERON:0000925,1.82e-08,160;UBERON:0006595,1.82e-08,160;UBERON:0005172,2.15e-08,54;UBERON:0005173,2.15e-08,54;UBERON:0007499,4.49e-08,25;UBERON:0000956,2.11e-07,25;UBERON:0000203,2.11e-07,25;UBERON:0002417,2.80e-07,60;UBERON:0000916,2.80e-07,60;UBERON:0002108,4.73e-07,4;UBERON:0002368,9.70e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28988789704845,1.50561867580173,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,1.19276791489337,0.580969714347592,1.0366105501537,0.756962552626885,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,2.94848165003288,1.77236972004421,0,2.7057456479485,0,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,3.90419561572865,0.773288812777695,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,0,0.184161977871793,0,0,0,1.35359883872224,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0.447749509444357,0,0,0,0,0,0.721287081534056,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,1.9882952955326,0.562677665642051,0,0,0.211125408127993,0,1.10513566212459,0.503865495708552,0.102268682502155,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.463840490809256,0,0.260427761085233,0.524759999977174,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0.520874984799877,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,3.00755719311353,5.49927130440263,0,0.247127877893006,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,3.36680037793539,0,0.300646838828985,0.518440956986236,0,0,0,0,0,0,0,0,0,3.66926003308263,0,0,0,0,0.0969890164884194,13.5031873837995,2.03382666702479,0,0,0.316553979779393,0,0,3.84215390530835,0,5.47543585185603,0,5.8342299273068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12090684996954,3.29663433524666,4.51603743823039,5.70879392785543,0,0,0.136203406111576,0.160753148465019,0.687697182986169,0.415440338029185,0,0,0.303747783290123,0,2.20655980437755,3.35709364063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,2.65013777824443,0.517131825446202,0.13223260174269,0,0,0.320362237703084,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,3.14108192500469,0,0,0.1251909307065,0,0.332787154610557,0.496771223531068,0.276697269872462,0.499921631848426,0,0,0,1.40500471742064,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0,0,0.511577485214607,0,0.314531883711793,0.109209638192014,0,0.212574920101683,0.991486114072017,0,0,0,0.80057074828547,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,5.04143392443436,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,2.34454203369928,0,0,0,0.270150338473579,1.56215619722769,0,0.380494861163441,4.37579847214576,1.09651553371436,0,0,0,0.535701835878287,0,0,1.36597314810779,0,0,0,0.40781839786099,0.328863867814245,0,0,0.313972371402056,0,0.280272163313789,0.913158720509496,0.431855182437243,0,0.571812353413251,0.316027223465453,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0.588901401691458,0.731507549893617,0,0,0,0,7.25212336732527,0.198950775161368,0,0.79062257427272,0.329821550236287,4.98177383770023,3.85870790539723,0.218559560503957,1.88126918544609,0,12.7265335434878,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,2.92134555298607,0,0.143339583151451,4.57537530360235,0.475940431336403,2.61810414204226,2.645134202577,0,0,0,0,0.655593431782173,0,0,1.3360870263278,0.0918948995348449,0,0.303114792872958,0,0,0.103432995861895,1.91910583710883,0,0,0.31037357147929,0,0,0,0,0,0.740872583160463,4.2316101181679,0.99798106963804,0,0,0,0.179650404213174,0,0.244482888365733,0.813792356631477,1.33151354837103,0,0 | |||
|short_description=p2@TOX3 | |||
}} |
Revision as of 03:34, 12 January 2014
Short description: | p2@TOX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TOX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -147bp_to_ENST00000219746, NM_001080430, uc002egw.2, uc010vgu.1_5end |
EntrezGene: | TOX3 |
HGNC: | 11972 |
UniProt: | O15405B4DRD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.81e-14 | 12 |
astrocyte of the cerebral cortex | 9.18e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.41e-12 | 118 |
gastrointestinal system | 7.20e-12 | 25 |
organ system subdivision | 1.94e-11 | 223 |
intestine | 2.09e-11 | 17 |
digestive tract diverticulum | 4.52e-11 | 23 |
liver | 4.64e-11 | 19 |
digestive gland | 4.64e-11 | 19 |
liver bud | 4.64e-11 | 19 |
epithelium of foregut-midgut junction | 3.02e-10 | 25 |
anatomical boundary | 3.02e-10 | 25 |
hepatobiliary system | 3.02e-10 | 25 |
foregut-midgut junction | 3.02e-10 | 25 |
septum transversum | 3.02e-10 | 25 |
digestive system | 5.91e-10 | 145 |
digestive tract | 5.91e-10 | 145 |
primitive gut | 5.91e-10 | 145 |
sac | 1.34e-09 | 26 |
exocrine gland | 1.56e-09 | 31 |
exocrine system | 1.56e-09 | 31 |
hepatic diverticulum | 2.31e-09 | 22 |
liver primordium | 2.31e-09 | 22 |
endoderm-derived structure | 1.82e-08 | 160 |
endoderm | 1.82e-08 | 160 |
presumptive endoderm | 1.82e-08 | 160 |
abdomen element | 2.15e-08 | 54 |
abdominal segment element | 2.15e-08 | 54 |
epithelial sac | 4.49e-08 | 25 |
cerebral cortex | 2.11e-07 | 25 |
pallium | 2.11e-07 | 25 |
abdominal segment of trunk | 2.80e-07 | 60 |
abdomen | 2.80e-07 | 60 |
small intestine | 4.73e-07 | 4 |
endocrine gland | 9.70e-07 | 35 |