FFCP PHASE1:Hg19::chr17:56494908..56494949,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18505 | |||
|TSSclassifier=strong | |||
|UniProt=Q68DV7 | |||
|association_with_transcript=0bp_to_NM_017763,uc002iwg.3,uc002iwh.3,uc010dcw.2_5end | |||
|coexpression_cluster_id=C2423 | |||
|description=CAGE_peak_2_at_RNF43_5end | |||
|id=chr17:56494908..56494949,- | |||
|ontology_enrichment_celltype=CL:0000066!1.17e-19!254;CL:0000223!6.25e-19!59;CL:0002076!3.09e-15!43;CL:0002251!2.30e-09!21;CL:0002368!2.65e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.32e-13;42!CL:0002251;1.76e-10;20!CL:0002368;4.91e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.88e-19,58;CL:0000066,4.06e-18,253;CL:0002076,5.11e-17,42;CL:0002251,1.78e-10,20;CL:0002368,4.07e-09,13 | |||
|ontology_enrichment_development_v019=CL:0000223;2.08e-10;58!UBERON:0006595;4.67e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.12e-21!106;DOID:0050687!3.06e-14!143;DOID:1749!1.19e-08!14;DOID:162!6.82e-08!235;DOID:14566!3.92e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-10;14!DOID:305;6.11e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.56e-18,106;DOID:1749,6.93e-11,14;DOID:0050687,2.17e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.55e-23!169;UBERON:0000925!1.55e-23!169;UBERON:0006595!1.55e-23!169;UBERON:0007023!7.76e-22!115;UBERON:0001007!3.87e-20!155;UBERON:0001555!3.87e-20!155;UBERON:0007026!3.87e-20!155;UBERON:0004921!1.92e-19!129;UBERON:0004185!1.92e-19!129;UBERON:0000077!7.90e-17!130;UBERON:0001041!1.74e-14!98;UBERON:0001004!6.83e-14!72;UBERON:0000481!9.88e-14!347;UBERON:0005911!1.06e-12!82;UBERON:0000064!2.04e-12!219;UBERON:0000065!3.07e-11!53;UBERON:0000062!3.68e-11!511;UBERON:0000153!5.05e-11!129;UBERON:0007811!5.05e-11!129;UBERON:0001049!5.06e-11!57;UBERON:0005068!5.06e-11!57;UBERON:0006241!5.06e-11!57;UBERON:0007135!5.06e-11!57;UBERON:0000033!2.12e-10!123;UBERON:0002616!1.44e-09!59;UBERON:0008947!2.62e-09!38;UBERON:0003258!2.62e-09!38;UBERON:0000466!2.89e-09!126;UBERON:0000955!5.21e-09!69;UBERON:0006238!5.21e-09!69;UBERON:0001048!1.08e-08!168;UBERON:0005177!1.59e-08!107;UBERON:0000063!1.74e-08!97;UBERON:0002780!2.45e-08!41;UBERON:0001890!2.45e-08!41;UBERON:0006240!2.45e-08!41;UBERON:0004111!2.60e-08!241;UBERON:0000072!3.87e-08!46;UBERON:0002365!4.75e-08!31;UBERON:0002330!4.75e-08!31;UBERON:0001017!5.19e-08!82;UBERON:0004121!6.39e-08!169;UBERON:0003080!6.77e-08!42;UBERON:0002530!7.60e-08!59;UBERON:0000924!1.72e-07!173;UBERON:0006601!1.72e-07!173;UBERON:0005743!1.73e-07!86;UBERON:0000475!2.35e-07!365;UBERON:0005153!2.53e-07!37;UBERON:0000477!4.19e-07!286;UBERON:0003075!4.77e-07!86;UBERON:0007284!4.77e-07!86;UBERON:0001950!5.02e-07!20;UBERON:0003929!5.43e-07!54;UBERON:0005178!7.00e-07!34;UBERON:0002224!7.00e-07!34;UBERON:0009569!9.21e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.13e-11;33!UBERON:0005409;5.30e-10;22!UBERON:0000065;3.16e-08;44!UBERON:0001555;6.85e-08;54!UBERON:0000160;1.25e-07;17!UBERON:0001004;6.36e-07;65!UBERON:0001950;9.10e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.38e-22,160;UBERON:0000925,4.38e-22,160;UBERON:0006595,4.38e-22,160;UBERON:0001007,1.81e-19,145;UBERON:0001555,1.81e-19,145;UBERON:0007026,1.81e-19,145;UBERON:0004921,2.48e-19,118;UBERON:0011216,2.06e-17,223;UBERON:0001041,4.03e-14,87;UBERON:0001004,6.53e-14,74;UBERON:0007023,1.70e-12,114;UBERON:0000065,4.25e-11,54;UBERON:0005911,9.22e-11,82;UBERON:0008947,7.23e-09,38;UBERON:0003258,7.23e-09,38;UBERON:0005409,3.60e-08,25;UBERON:0001048,3.99e-08,160;UBERON:0000160,1.30e-07,17;UBERON:0000072,1.81e-07,47;UBERON:0005153,4.87e-07,37;UBERON:0005177,4.99e-07,101;UBERON:0001950,6.42e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,2.09340350391728,0,0.791300934685361,0,0,0,0,0,0,6.1560529038394,0.612002073732759,2.19418305034661,0,0,0,13.6015862231353,11.9866860596921,10.3898231334057,0,0,0,2.75826367343678,2.10844143144775,2.9580320813343,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,3.27447688744282,6.55731518926576,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1843473012255,9.54611422067921,8.31733326628111,3.29329006549908,0.927708378250397,3.36962434321603,2.798848485415,3.28017106138317,1.45990943630332,0,0,1.38134921352481,0,0,1.8929088006375,1.18009283054671,1.92808823906786,1.21323370005633,1.96091499683166,1.18635309555548,0.943819157121151,1.17732879075208,1.53898862778556,0,0,0.4115740113314,0,5.07020139287323,3.9313088667105,3.54473944008842,0,23.859757077364,0,8.12152112023829,4.49607013030478,3.82010095164197,5.09236448371913,0,0,0,0.231860809950154,0,0,0,0,11.0628615714299,12.8772924314231,0,0,0,7.49870671894216,12.5986596149145,8.79005602902796,1.34337784054272,2.3250715081117,1.15014803749563,0,0,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.50719688529793,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,17.4037607411936,2.80709058424599,3.68323955743585,0,0,0,1.80479845162965,0.616122696835318,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0.764628819135115,3.3243040357149,0.447749509444357,0,0,0,0,0,7.00678879204511,0,0,4.01985876597321,8.45078319847478,0,0,0,0,0,0,0,0,0,5.61968712227326,3.84380134730212,15.951589061823,1.8208400553999,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52243929809907,1.34060455107157,2.17781969722645,8.37879826913334,2.15252686335615,5.05414427002877,1.7737206141467,1.60806380144872,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,2.94048259177238,0,0,0.853702120180969,0.159426272728822,0,0,1.90506224451495,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,5.98849729306303,0.146508179271894,0,4.23484860254418,3.69376990848337,0.23874448473769,2.67268212749375,1.22864280839693,3.97659059106519,0.422008249231538,0,0,1.05562704063997,0.796991953004279,3.03912307084262,12.8485701405681,0.306806047506464,15.2625158771726,0,0,0.895105873378046,0,0.789147245095469,0,0,5.81599647657131,2.50473865036998,0,9.63582716015363,4.1106199998212,0,3.30001000027949,4.32231205497703,3.30942754475111,0.344743373241465,2.04123229368278,0,4.42870692906919,0.120596438625408,12.2065389053667,16.9186267694774,6.79759523593159,1.09692698576986,0.10893846351899,7.38945844676597,1.53900517007594,0.341826167541004,0.69169171316418,0.448788222048861,5.75831071186643,0.638002319463839,0.0915975934018623,0.533034776018635,3.06579894587209,0,0,0.902382642468723,1.37243774022418,1.1747511088309,0,0.317873157960757,1.68798451622422,6.8557779426842,29.9668511439955,33.323850520282,8.95735737970654,11.9417712079508,17.7198742030751,0,0,0,0.876214728748802,0,0.234264445725339,0,2.34797542718508,0,8.68085686268659,13.308978765353,0,0.442306057399416,6.16326019599419,6.94710882361556,0,0,0,0,0.853828638089378,0,0.520679215005393,5.38958185779077,5.92002604746737,5.2418000472609,0,0.0967563312890851,0,0,6.40127508823568,0,1.12990370390266,0.137041924646751,0,2.089256266544,10.1686719022098,3.52698809106748,2.98834192635094,0.39961921916426,7.49270169201351,14.889757501569,0.514784993585894,4.75380833360894,0,5.42096279618629,0,0,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.525774708558629,1.11712960508902,0.687481272035051,0,2.99518500748487,2.14613024068285,1.11585728720936,3.02325626190268,0,29.1239873818635,35.7675647674795,35.3564032455204,42.2620219965739,0.78741985211799,5.50376658427599,0,0.408610218334727,2.08979093004525,0.687697182986169,1.66176135211674,0.2249738915515,0.77380195455795,1.57948847310864,1.34173875039706,4.57073102335349,8.75991621854468,0,0,8.0604382874167,2.1440859791201,0,0,0,0,0,0,1.23138781124008,0,0.566560457600628,3.07759690723973,1.32506888912221,0.129282956361551,0.52893040697076,4.61934462287689,0,3.52398461473392,7.54580664478397,2.89967338743037,0,0.592834895693833,16.8073785765636,41.4921817550618,0,0,0,0,31.8819815387976,5.31640907980192,5.36915565568638,2.75420047554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| |||
|short_description=p2@RNF43 | |||
}} |
Revision as of 16:31, 20 January 2014
Short description: | p2@RNF43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF43_5end |
Coexpression cluster: | C2423_small_signet_papillotubular_malignant_hepatocellular_maxillary_colon |
Association with transcript: | 0bp_to_NM_017763, uc002iwg.3, uc002iwh.3, uc010dcw.2_5end |
EntrezGene: | RNF43 |
HGNC: | 18505 |
UniProt: | Q68DV7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.88e-19 | 58 |
epithelial cell | 4.06e-18 | 253 |
endo-epithelial cell | 5.11e-17 | 42 |
epithelial cell of alimentary canal | 1.78e-10 | 20 |
respiratory epithelial cell | 4.07e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.38e-22 | 160 |
endoderm | 4.38e-22 | 160 |
presumptive endoderm | 4.38e-22 | 160 |
digestive system | 1.81e-19 | 145 |
digestive tract | 1.81e-19 | 145 |
primitive gut | 1.81e-19 | 145 |
subdivision of digestive tract | 2.48e-19 | 118 |
organ system subdivision | 2.06e-17 | 223 |
foregut | 4.03e-14 | 87 |
respiratory system | 6.53e-14 | 74 |
adult organism | 1.70e-12 | 114 |
respiratory tract | 4.25e-11 | 54 |
endo-epithelium | 9.22e-11 | 82 |
respiratory primordium | 7.23e-09 | 38 |
endoderm of foregut | 7.23e-09 | 38 |
gastrointestinal system | 3.60e-08 | 25 |
primordium | 3.99e-08 | 160 |
intestine | 1.30e-07 | 17 |
segment of respiratory tract | 1.81e-07 | 47 |
epithelial bud | 4.87e-07 | 37 |
trunk region element | 4.99e-07 | 101 |
neocortex | 6.42e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.56e-18 | 106 |
squamous cell carcinoma | 6.93e-11 | 14 |
cell type cancer | 2.17e-10 | 143 |