FFCP PHASE1:Hg19::chr18:56320715..56320732,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr18:56320715..56320732,+ | |||
|id=chr18:56320715..56320732,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.15e-36!42;CL:0000860!2.10e-33!45;CL:0000738!5.07e-32!140;CL:0002031!1.04e-29!124;CL:0002009!2.02e-29!65;CL:0002087!1.01e-26!119;CL:0000557!1.54e-26!71;CL:0002032!4.25e-26!165;CL:0000837!4.25e-26!165;CL:0000453!5.16e-25!5;CL:0000037!9.57e-25!172;CL:0000566!9.57e-25!172;CL:0002194!1.08e-24!63;CL:0000576!1.08e-24!63;CL:0000040!1.08e-24!63;CL:0000559!1.08e-24!63;CL:0000988!5.42e-23!182;CL:0000839!8.47e-22!70;CL:0000763!1.55e-20!112;CL:0000049!1.55e-20!112;CL:0000766!9.72e-20!76;CL:0000990!8.84e-14!8;CL:0000945!1.30e-11!24;CL:0000826!1.30e-11!24;CL:0000451!3.22e-11!10;CL:0001014!9.21e-11!2;CL:0001016!9.21e-11!2;CL:0000134!1.09e-09!358;CL:0002320!2.34e-09!365;CL:0000219!6.03e-09!390;CL:0000034!1.08e-07!444;CL:0000048!1.78e-07!430;CL:0000723!2.89e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.79e-30;33!CL:0002057;2.79e-30;33!CL:0000453;4.90e-28;5!CL:0000473;3.38e-21;39!CL:0000234;3.38e-21;39!CL:0000990;1.09e-15;8!CL:0000451;7.17e-13;10!CL:0000945;3.99e-12;24!CL:0000576;4.28e-12;48!CL:0002087;9.48e-11;104!CL:0000738;1.25e-10;136!CL:0000946;7.50e-10;1!CL:0000786;7.50e-10;1!CL:0000766;1.09e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.07e-28,136;CL:0000453,5.25e-28,5;CL:0000860,4.62e-26,42;CL:0002057,4.62e-26,42;CL:0002031,4.53e-24,120;CL:0002032,9.74e-24,161;CL:0000837,9.74e-24,161;CL:0000037,1.31e-22,168;CL:0000473,1.47e-22,48;CL:0000234,1.47e-22,48;CL:0002087,1.67e-22,115;CL:0000988,2.73e-21,177;CL:0002009,3.43e-20,61;CL:0000557,3.25e-18,67;CL:0002194,1.19e-17,59;CL:0000576,1.19e-17,59;CL:0000040,1.19e-17,59;CL:0000559,1.19e-17,59;CL:0000763,1.01e-16,108;CL:0000049,1.01e-16,108;CL:0000990,1.13e-15,8;CL:0000839,1.34e-15,66;CL:0000766,3.74e-14,72;CL:0000451,7.39e-13,10;CL:0000945,4.15e-12,24;CL:0000826,4.15e-12,24;CL:0000946,7.50e-10,1;CL:0000786,7.50e-10,1;CL:0000980,7.50e-10,1;CL:0000134,7.44e-09,354;CL:0002320,1.31e-08,361;CL:0000219,9.54e-08,386;CL:0000838,3.84e-07,52;CL:0000542,5.42e-07,53;CL:0000051,5.42e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;3.01e-16;42 | |||
|ontology_enrichment_disease=DOID:0060058!4.59e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;4.46e-10;1!DOID:630;7.50e-10;1!DOID:0050177;7.50e-10;1!DOID:0050427;7.50e-10;1!DOID:0060058;3.06e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,4.46e-10,1;DOID:630,8.17e-10,1;DOID:0050177,8.17e-10,1;DOID:0050427,8.17e-10,1;DOID:0060058,2.99e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.09e-23!80;UBERON:0001474!4.44e-21!86;UBERON:0002390!9.45e-21!102;UBERON:0003061!9.45e-21!102;UBERON:0002193!3.57e-20!112;UBERON:0002405!1.67e-19!115;UBERON:0004765!3.13e-17!101;UBERON:0001434!3.13e-17!101;UBERON:0002204!1.60e-09!167;UBERON:0002384!6.63e-09!375;UBERON:0003081!7.37e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.94e-16,76;UBERON:0002405,9.57e-15,93;UBERON:0001474,1.60e-14,82;UBERON:0002390,7.06e-14,98;UBERON:0003061,7.06e-14,98;UBERON:0004765,4.75e-13,90;UBERON:0002193,2.22e-12,108;UBERON:0001434,1.55e-11,100;UBERON:0002384,2.82e-08,371 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43860325865781,4.10502947249729,2.91229890860613,0,0,0,0,0,0,0,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,4.33588919253145,0,0.256160706529101,0.709446689665756,4.82643953031266,7.74581620300591,4.06279459783025,0,0.545812300115692,1.12361742222542,1.53041946185451,7.06043859567406,1.91801137739712,0,0,0,0.580418477257168,2.26954089876456,1.86846674698672,0,0.521482918420201,0.217188844705117,0,3.68277635987565,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57515967237122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8660730658805,0,0,0,0,0,11.0237206860235,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,7.01497111821798,21.6569689710782,24.5348091383766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.56833729067942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59670473179602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,6.09080135376143 | |||
|short_description=p@chr18:56320715..56320732,+ | |||
}} |
Revision as of 19:33, 20 January 2014
Short description: | p@chr18:56320715..56320732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56320715..56320732, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.94e-16 | 76 |
immune system | 9.57e-15 | 93 |
bone element | 1.60e-14 | 82 |
hematopoietic system | 7.06e-14 | 98 |
blood island | 7.06e-14 | 98 |
skeletal element | 4.75e-13 | 90 |
hemolymphoid system | 2.22e-12 | 108 |
skeletal system | 1.55e-11 | 100 |
connective tissue | 2.82e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
anemia | 4.46e-10 | 1 |
genetic disease | 8.17e-10 | 1 |
monogenic disease | 8.17e-10 | 1 |
xeroderma pigmentosum | 8.17e-10 | 1 |
lymphoma | 2.99e-08 | 10 |