FFCP PHASE1:Hg19::chr18:67956289..67956296,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16833 | |||
|TSSclassifier=strong | |||
|UniProt=O14544 | |||
|association_with_transcript=121bp_to_ENST00000397942_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_SOCS6_5end | |||
|id=chr18:67956289..67956296,+ | |||
|ontology_enrichment_celltype=CL:0000557!1.92e-09!71;CL:0000839!8.49e-09!70;CL:0000860!1.60e-08!45;CL:0002057!2.28e-08!42;CL:0002009!1.05e-07!65;CL:0002194!1.67e-07!63;CL:0000576!1.67e-07!63;CL:0000040!1.67e-07!63;CL:0000559!1.67e-07!63;CL:0000766!1.72e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.73e-17;33!CL:0002057;3.73e-17;33!CL:0000097;2.95e-14;5!CL:0000473;2.85e-12;39!CL:0000234;2.85e-12;39!CL:0000576;1.19e-10;48!CL:0000766;2.60e-09;69!CL:0000163;9.90e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,5.90e-18,66;CL:0000557,1.36e-17,67;CL:0000766,6.12e-16,72;CL:0000860,4.08e-15,42;CL:0002057,4.08e-15,42;CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0000473,2.00e-14,48;CL:0000234,2.00e-14,48;CL:0002194,4.38e-12,59;CL:0000576,4.38e-12,59;CL:0000040,4.38e-12,59;CL:0000559,4.38e-12,59;CL:0002009,1.54e-11,61;CL:0000763,1.51e-10,108;CL:0000049,1.51e-10,108;CL:0000163,7.69e-08,9;CL:0002031,3.28e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.74e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.06e-09!80;UBERON:0004765!3.34e-08!101;UBERON:0001434!3.34e-08!101;UBERON:0001474!8.36e-08!86;UBERON:0000062!1.40e-07!511;UBERON:0000468!5.90e-07!659;UBERON:0000467!8.01e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.58e-07;10!UBERON:0000158;6.58e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-16,76;UBERON:0002390,9.48e-15,98;UBERON:0003061,9.48e-15,98;UBERON:0001474,1.15e-14,82;UBERON:0004765,4.57e-14,90;UBERON:0002193,1.02e-12,108;UBERON:0002405,3.56e-12,93;UBERON:0001434,5.36e-12,100;UBERON:0003081,2.78e-08,203 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0.631719873426831,0.261185628199839,0.737201809504527,0,0.873765488520689,0.263766978228454,0.74259811776028,1.32558950291166,0,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0.587200878669695,1.10799081706375,0.401088894940283,0.434021741431704,0.671746422719773,0.647787332037959,1.80302897343931,1.45398238779565,1.51150377475524,0,0.464858073811369,1.6446715520873,0.929119112685311,1.43846196161075,2.81776777182011,1.41889337933151,1.03423704220986,0.645484683583826,1.35426486594342,0.752969358170419,0.818718450173537,0.449446968890169,0.612167784741805,1.60464513538047,0,0.659702600373432,2.39356389145958,2.13112375266347,0.870627715885752,1.13477044938228,0,2.51248665256743,1.5644487552606,3.69221035998698,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.628975936525128,0.22465726229299,1.05123824989054,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0.557052284425868,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.567208902984407,0,0.614843499851882,0.0654895377488563,0,0,0,0,0.930705723632056,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0.535798369704479,0.44905874525234,0.675668882899933,0,0,0.732806975721629,0,0,0.436094052142534,0.993943903390637,0.25326102332916,1.05927344650575,0.286836620748814,1.06400514659507,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0.326923806226917,0.302714855289863,0,0.468642863667593,0.624320153660641,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.421352420106746,0.408308342509787,0.122834317311768,0.516628905878827,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0,0.919463387397059,0.300476117813194,0.453728732640084,0.179389635688862,0.85422955527427,0.847727604638247,0.600182192168805,0.309157587715317,0.257640540045629,0.744467425326359,2.19409231913646,0.974370051611986,0.252433774244115,0.460249493211497,0.323292113637624,0.710019185033229,0.806016785821122,0.339121184620975,0.193260853163297,0.818238361772504,0.573609190778008,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,1.92972281457866,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.482022059766964,0.330881918197182,1.08939722046203,0.71181185733329,0,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.857839051492628,0.439001141634502,1.1240175325762,0.201057944823262,0.925884451585296,0,0,0,0.34779121492523,0.587043471179108,0.144366447761074,0,0,0,0,1.47730203652438,0.702012795417713,0.148631162288728,0,0.335964256397719,0.283550194484773,0.358234090811393,0.290633938513962,0.383382679165211,18.2285398021499,1.58487181223807,2.28060927094849,1.72943944100354,1.00993946741104,1.39695367442772,0,0,0,0.411309970813294,0.300343057843917,0.285826432630578,0.224262168690721,0.87192013766656,0.22001485746285,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0.904318131178758,0,0.699810938274399,0,0.502257091432126,0,0,1.14861935834114,0,0.579125226670317,0.410952645100767,0.895304816199478,0,0,0,0.128343036279748,0,3.90419561572865,0,0.167516265334349,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,0,0.178428988797162,0.473107245101804,0.35142424497814,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0.195801157462741,0,0,0.431428401637234,0,0,0,0,0.248107807818777,1.2276957863045,0,0.128139149255701,0.511707249066704,0.804269605718038,0,0,0.355123450626254,0.821271560138091,0.519254429183621,0.464841513839837,0.362578348774867,0,1.01289087829486,0.229628896329213,0,0.262248829918848,0,0.308061348417659,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.537101224341368,0.435050081742686,0.255679882248303,0.445160178233687,0.661139661443912,0.768760269460425,0.255225424989168,0.6069466851333,0.929691098594572,0.31481234683064,0,0.308033580176089,0.532306030317022,0.869932992075073,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0.48763373908959,0.243713489631284,0,0.818999468447914,0.42421629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| |||
|short_description=p3@SOCS6 | |||
}} |
Revision as of 19:46, 20 January 2014
Short description: | p3@SOCS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SOCS6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 121bp_to_ENST00000397942_5end |
EntrezGene: | SOCS6 |
HGNC: | 16833 |
UniProt: | O14544 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 5.90e-18 | 66 |
granulocyte monocyte progenitor cell | 1.36e-17 | 67 |
myeloid leukocyte | 6.12e-16 | 72 |
classical monocyte | 4.08e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.08e-15 | 42 |
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
defensive cell | 2.00e-14 | 48 |
phagocyte | 2.00e-14 | 48 |
monopoietic cell | 4.38e-12 | 59 |
monocyte | 4.38e-12 | 59 |
monoblast | 4.38e-12 | 59 |
promonocyte | 4.38e-12 | 59 |
macrophage dendritic cell progenitor | 1.54e-11 | 61 |
myeloid cell | 1.51e-10 | 108 |
common myeloid progenitor | 1.51e-10 | 108 |
endocrine cell | 7.69e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.28e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-16 | 76 |
hematopoietic system | 9.48e-15 | 98 |
blood island | 9.48e-15 | 98 |
bone element | 1.15e-14 | 82 |
skeletal element | 4.57e-14 | 90 |
hemolymphoid system | 1.02e-12 | 108 |
immune system | 3.56e-12 | 93 |
skeletal system | 5.36e-12 | 100 |
lateral plate mesoderm | 2.78e-08 | 203 |