FFCP PHASE1:Hg19::chr19:2042012..2042062,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7111 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NV89 | |||
|association_with_transcript=16bp_to_uc002luq.1_5end | |||
|description=CAGE_peak_2_at_MKNK2_5end | |||
|id=chr19:2042012..2042062,- | |||
|ontology_enrichment_celltype=CL:0000738!1.27e-28!140;CL:0002031!2.03e-19!124;CL:0002087!3.04e-19!119;CL:0000988!6.60e-18!182;CL:0000037!7.28e-18!172;CL:0000566!7.28e-18!172;CL:0002032!1.00e-15!165;CL:0000837!1.00e-15!165;CL:0000766!9.52e-15!76;CL:0002057!3.62e-12!42;CL:0000557!9.28e-12!71;CL:0000860!4.18e-11!45;CL:0002009!1.50e-10!65;CL:0000839!9.83e-10!70;CL:0002194!1.09e-09!63;CL:0000576!1.09e-09!63;CL:0000040!1.09e-09!63;CL:0000559!1.09e-09!63;CL:0000838!2.36e-09!52;CL:0000542!2.72e-09!53;CL:0000051!2.72e-09!53;CL:0000763!1.35e-07!112;CL:0000049!1.35e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-09;33!CL:0002057;1.58e-09;33!CL:0000473;2.64e-09;39!CL:0000234;2.64e-09;39!CL:0000766;1.11e-08;69!CL:0000094;1.53e-07;8!CL:0000576;1.61e-07;48!CL:0000738;3.13e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.73e-33,136;CL:0002031,2.30e-23,120;CL:0000988,3.67e-23,177;CL:0000037,3.37e-22,168;CL:0002087,5.92e-22,115;CL:0002032,1.47e-19,161;CL:0000837,1.47e-19,161;CL:0000766,7.15e-19,72;CL:0000557,4.39e-15,67;CL:0000473,6.32e-15,48;CL:0000234,6.32e-15,48;CL:0000860,1.97e-13,42;CL:0002057,1.97e-13,42;CL:0002009,2.41e-13,61;CL:0000839,5.95e-13,66;CL:0002194,2.97e-12,59;CL:0000576,2.97e-12,59;CL:0000040,2.97e-12,59;CL:0000559,2.97e-12,59;CL:0000763,9.21e-11,108;CL:0000049,9.21e-11,108;CL:0000838,1.22e-09,52;CL:0000542,3.40e-09,53;CL:0000051,3.40e-09,53;CL:0000094,1.54e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.69e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.94e-15!102;UBERON:0003061!3.94e-15!102;UBERON:0002193!2.23e-13!112;UBERON:0007023!2.98e-12!115;UBERON:0002371!5.17e-09!80;UBERON:0001474!5.88e-08!86;UBERON:0002405!5.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.25e-07;15!UBERON:0000179;8.25e-07;15!UBERON:0000463;8.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.99e-20,98;UBERON:0003061,2.99e-20,98;UBERON:0002193,9.39e-18,108;UBERON:0002371,9.89e-13,76;UBERON:0002405,1.17e-12,93;UBERON:0001474,1.69e-11,82;UBERON:0007023,8.75e-10,114;UBERON:0004765,4.30e-09,90;UBERON:0000178,4.65e-07,15;UBERON:0000179,4.65e-07,15;UBERON:0000463,4.65e-07,15;UBERON:0001434,8.37e-07,100 | |||
|phase1_expression=0,1.2846031433459,0.140954404095971,0,0.893922188854576,0,2.53299878168311,0,0.261185628199839,0.491467873003018,2.09340350391728,0.218441372130172,0.791300934685361,0.618831764800233,0.662794751455832,0,0.602694528023977,0,0,1.23121058076788,1.02000345622126,3.13454721478088,0.572471974262113,0.273748850145768,0.502170558379211,4.27915072188527,6.40384597709577,5.50975469195755,5.50709987588466,4.60595277716655,6.81190942590734,0,0.30120591877825,1.10926203050036,2.63388481973026,0.142169232487422,3.81680571135301,4.43196326825502,7.2196001089251,6.51032612147556,1.34349284543955,1.29557466407592,0.77272670290256,1.01778767145695,0.755751887377619,1.4555043671269,6.97287110717054,4.52284676824008,2.78735733805593,2.3015391385772,2.30544635876191,3.07426898855161,3.10271112662957,1.93645405075148,2.70852973188684,5.83551252582075,4.63940455098338,3.59557575112135,4.59125838556354,1.60464513538047,3.83602275479425,1.31940520074686,1.79517291859469,2.98357325372886,4.06292934080018,1.70215567407342,8.71951148593805,0.75374599577023,2.08593167368081,2.38907729175628,3.02699751316684,2.94622108790052,3.79754864929061,3.16882929467913,1.4882300997553,2.09658645508376,2.2465726229299,3.00353785683013,3.05378614724452,2.56511469367124,1.19350006319454,2.73996230646951,0,1.63841583378639,0,1.28019066769952,1.60158394814405,0,2.64417949113945,1.90810750907073,7.39976859842283,5.28513470433845,3.82273228125229,6.60856642895129,6.1655941927969,0.526768169550154,7.08155172409799,5.10913991573914,2.67281948699362,0.501559486172034,4.56291173287027,2.8406868344084,1.94826728407911,2.33961959458865,2.65145316727353,1.32920336750173,3.24964636518019,0.896639238079726,2.9913649938772,0.657751618414705,0.829050053357545,0.289803085735052,2.66915813691709,2.40786745280742,1.04535523804977,0.226618685395132,1.14966148080576,2.06176467289578,3.28925599625354,0.318565414324097,0.651083453856419,0.950452044448374,0.903450714466637,0.383959833463255,2.49861453104692,1.4206635122641,1.64225599384209,4.43534835094411,6.15112450302067,4.34473211648397,4.87613732627923,0.670700859703636,0.639312809217652,0,0.50133791063589,0.289693037921647,0,0,0.850813354476611,0.443458794925128,1.66886092816939,1.76821751921912,1.45718115317017,0.370784442784429,1.9472843619281,1.0447784237956,2.12732736830184,3.10037811596945,4.57595928624102,2.60020250930695,0,0,0.347140501607594,0,0,1.37559020970034,0.417989933073621,0,0,1.33888245105868,0.402829317109147,0.760272105718513,0.24406205754817,0.367663080345869,0,0.625098097988558,0.22452937262617,0,0,0,0.366403487860815,23.7204751384914,34.9002237733493,1.3082821564276,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0.933633106199299,0,0.163461903113459,0.302714855289863,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,2.37600571456411,0.989067717114227,0,0.718618141816238,0,0.500474079487857,0,0.438977620880838,0,0,0,0,0.427114777637135,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0.966304265816484,0,0.286804595389004,1.95157929807353,3.31324420803713,2.20768491452085,1.96956004529204,1.7662459561294,2.18986415445498,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.392442930250692,0,0,2.80483547606892,0.4115740113314,0,8.87285243752816,3.9313088667105,2.95394953340702,3.97316789473185,0.491953754172454,0.686271241194102,1.64625428112938,0,1.91005047582099,1.574003567695,0.977424915930974,1.03993478527958,1.44331342025273,1.85488647960123,0.821860859650752,0.433099343283221,0.462985512576611,0.190254152234598,1.58040879591855,0,0,3.51006397708857,1.93220510975347,0,1.00789276919316,0.283550194484773,0,0.871901815541886,0,0,3.43388892651582,13.8909837412317,13.5472756211944,8.58448547299384,0.063497894292169,0.763976851116555,1.17217447210047,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0.87192013766656,0.07333828582095,0.517086863031111,3.57656445851882,0,0,0,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0,0,1.50719688529793,0.871533458600294,1.79951384127703,8.51366464488333,3.01354254859276,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,1.34502172792233,4.53170748464433,5.60631694634745,6.28880877770767,0,2.60279707715243,1.54657762555539,3.51784157202132,0.637938751653163,23.2192177423627,14.9580729602012,21.1351911852378,0.12269149171914,0,0.271265023699736,0.207970861530807,0.535286966391485,0,0,0.300946099727719,2.27407504055985,0,0,0,0.0868836144680828,0.195801157462741,0,1.86091223510599,4.74571241800957,2.77491650288955,0,0,1.20956117331872,0,0,0,0.256278298511402,0,0.160853921143607,1.48418066444991,0.462629081407967,0.355123450626254,0.0821271560138091,1.03850885836724,0.116210378459959,0.120859449591622,1.00253235151642,1.28913384510255,0.459257792658427,0.182091168006717,0.786746489756545,2.25599806453706,0.462092022626489,1.56869953835371,0,0.73886140225013,1.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| |||
|short_description=p2@MKNK2 | |||
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Revision as of 20:20, 20 January 2014
Short description: | p2@MKNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MKNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_uc002luq.1_5end |
EntrezGene: | MKNK2 |
HGNC: | 7111 |
UniProt: | Q9NV89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.73e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 2.30e-23 | 120 |
hematopoietic cell | 3.67e-23 | 177 |
hematopoietic stem cell | 3.37e-22 | 168 |
nongranular leukocyte | 5.92e-22 | 115 |
hematopoietic oligopotent progenitor cell | 1.47e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-19 | 161 |
myeloid leukocyte | 7.15e-19 | 72 |
granulocyte monocyte progenitor cell | 4.39e-15 | 67 |
defensive cell | 6.32e-15 | 48 |
phagocyte | 6.32e-15 | 48 |
classical monocyte | 1.97e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-13 | 42 |
macrophage dendritic cell progenitor | 2.41e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.95e-13 | 66 |
monopoietic cell | 2.97e-12 | 59 |
monocyte | 2.97e-12 | 59 |
monoblast | 2.97e-12 | 59 |
promonocyte | 2.97e-12 | 59 |
myeloid cell | 9.21e-11 | 108 |
common myeloid progenitor | 9.21e-11 | 108 |
lymphoid lineage restricted progenitor cell | 1.22e-09 | 52 |
lymphocyte | 3.40e-09 | 53 |
common lymphoid progenitor | 3.40e-09 | 53 |
granulocyte | 1.54e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.99e-20 | 98 |
blood island | 2.99e-20 | 98 |
hemolymphoid system | 9.39e-18 | 108 |
bone marrow | 9.89e-13 | 76 |
immune system | 1.17e-12 | 93 |
bone element | 1.69e-11 | 82 |
adult organism | 8.75e-10 | 114 |
skeletal element | 4.30e-09 | 90 |
blood | 4.65e-07 | 15 |
haemolymphatic fluid | 4.65e-07 | 15 |
organism substance | 4.65e-07 | 15 |
skeletal system | 8.37e-07 | 100 |