FFCP PHASE1:Hg19::chr19:18061616..18061657,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=6290 | |||
|TSSclassifier=weak | |||
|UniProt=Q92952 | |||
|association_with_transcript=-453bp_to_ENST00000222249,NM_002248,uc002nht.2_5end | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_3_at_KCNN1_5end | |||
|id=chr19:18061616..18061657,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-26!140;CL:0002031!2.99e-21!124;CL:0000557!4.24e-21!71;CL:0000037!1.12e-20!172;CL:0000566!1.12e-20!172;CL:0000766!1.71e-19!76;CL:0000988!2.92e-19!182;CL:0002057!1.19e-18!42;CL:0002032!3.64e-18!165;CL:0000837!3.64e-18!165;CL:0002393!2.40e-17!9;CL:0002397!2.40e-17!9;CL:0000860!2.98e-17!45;CL:0000839!2.64e-16!70;CL:0002087!3.77e-16!119;CL:0000763!1.06e-15!112;CL:0000049!1.06e-15!112;CL:0002009!2.13e-15!65;CL:0001014!1.04e-13!2;CL:0001016!1.04e-13!2;CL:0002274!1.04e-11!5;CL:0000457!1.04e-11!5;CL:0002191!1.04e-11!5;CL:0000097!1.04e-11!5;CL:0000831!1.04e-11!5;CL:0002028!1.04e-11!5;CL:0002194!1.90e-11!63;CL:0000576!1.90e-11!63;CL:0000040!1.90e-11!63;CL:0000559!1.90e-11!63;CL:0000767!2.06e-09!3;CL:0000623!2.64e-09!3;CL:0000825!2.64e-09!3;CL:0000842!4.68e-09!3;CL:0000134!3.36e-07!358;CL:0000224!5.38e-07!4;CL:0002320!5.84e-07!365;CL:0000034!7.60e-07!444;CL:0000219!7.71e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002393;4.90e-38;6!CL:0002397;4.90e-38;6!CL:0001014;1.00e-13;2!CL:0001016;1.00e-13;2!CL:0000767;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.17e-25,9;CL:0002397,1.17e-25,9;CL:0001014,1.07e-13,2;CL:0001016,1.07e-13,2;CL:0002009,2.61e-10,61;CL:0000860,5.72e-10,42;CL:0002057,5.72e-10,42;CL:0000767,1.67e-09,3;CL:0000557,2.04e-09,67;CL:0000738,7.06e-09,136;CL:0000473,9.00e-09,48;CL:0000234,9.00e-09,48;CL:0000766,9.03e-09,72;CL:0000763,2.62e-08,108;CL:0000049,2.62e-08,108;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0002031,1.77e-07,120;CL:0000037,3.55e-07,168;CL:0002194,4.34e-07,59;CL:0000576,4.34e-07,59;CL:0000040,4.34e-07,59;CL:0000559,4.34e-07,59;CL:0000988,8.33e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.12e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-19!102;UBERON:0003061!1.45e-19!102;UBERON:0002371!2.32e-18!80;UBERON:0002193!1.83e-17!112;UBERON:0001474!7.53e-17!86;UBERON:0004765!7.48e-14!101;UBERON:0001434!7.48e-14!101;UBERON:0002405!2.53e-13!115;UBERON:0003081!3.93e-07!216;UBERON:0002204!4.68e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.45e-08,76;UBERON:0001474,9.54e-08,82;UBERON:0004765,4.45e-07,90;UBERON:0002405,7.42e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0,0,0,0,0,3.87796785972314,6.61796676651468,7.81239134577067,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0.344745680736619,0,2.70852973188684,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.419317291016752,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@KCNN1 | |||
}} |
Revision as of 22:06, 20 January 2014
Short description: | p3@KCNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNN1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -453bp_to_ENST00000222249, NM_002248, uc002nht.2_5end |
EntrezGene: | KCNN1 |
HGNC: | 6290 |
UniProt: | Q92952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.17e-25 | 9 |
CD14-positive, CD16-positive monocyte | 1.17e-25 | 9 |
CD1a-positive Langerhans cell | 1.07e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.07e-13 | 2 |
macrophage dendritic cell progenitor | 2.61e-10 | 61 |
classical monocyte | 5.72e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.72e-10 | 42 |
basophil | 1.67e-09 | 3 |
granulocyte monocyte progenitor cell | 2.04e-09 | 67 |
leukocyte | 7.06e-09 | 136 |
defensive cell | 9.00e-09 | 48 |
phagocyte | 9.00e-09 | 48 |
myeloid leukocyte | 9.03e-09 | 72 |
myeloid cell | 2.62e-08 | 108 |
common myeloid progenitor | 2.62e-08 | 108 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.77e-07 | 120 |
hematopoietic stem cell | 3.55e-07 | 168 |
monopoietic cell | 4.34e-07 | 59 |
monocyte | 4.34e-07 | 59 |
monoblast | 4.34e-07 | 59 |
promonocyte | 4.34e-07 | 59 |
hematopoietic cell | 8.33e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.45e-08 | 76 |
bone element | 9.54e-08 | 82 |
skeletal element | 4.45e-07 | 90 |
immune system | 7.42e-07 | 93 |