FFCP PHASE1:Hg19::chr2:20402086..20402095,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_at_chr2:20402086..20402095,- | |||
|id=chr2:20402086..20402095,- | |||
|ontology_enrichment_celltype=CL:0000066!6.78e-23!254;CL:0002076!5.12e-15!43;CL:0000223!3.43e-14!59;CL:0002321!4.46e-12!248;CL:0000220!1.35e-11!246;CL:0002368!3.46e-09!13;CL:0002251!9.37e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.88e-21;13!CL:0000244;2.34e-19;4!CL:0000731;2.34e-19;4!CL:0002202;9.94e-18;9!CL:0002632;9.94e-18;9!CL:0002076;1.10e-16;42!CL:0002621;6.41e-15;3!CL:0002328;1.63e-14;3!CL:0000307;4.07e-14;3!CL:0002159;2.37e-11;14!CL:0002327;4.24e-11;4!CL:0000575;2.19e-10;2!CL:0002231;1.52e-07;3!CL:0000240;1.75e-07;6!CL:0000311;1.75e-07;6!CL:0000079;1.75e-07;6!CL:0000237;1.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.60e-21,42;CL:0002368,5.46e-21,13;CL:0000066,4.05e-20,253;CL:0000244,2.60e-19,4;CL:0000731,2.60e-19,4;CL:0000223,3.82e-19,58;CL:0002202,1.44e-17,9;CL:0002632,1.44e-17,9;CL:0002621,6.02e-15,3;CL:0002328,1.68e-14,3;CL:0000068,6.92e-14,3;CL:0000069,6.92e-14,3;CL:0000307,6.92e-14,3;CL:0000377,6.92e-14,3;CL:0002159,1.08e-11,14;CL:0002327,4.19e-11,4;CL:0000575,1.09e-10,2;CL:0000240,1.55e-07,6;CL:0000311,1.55e-07,6;CL:0000079,1.55e-07,6;CL:0000237,1.55e-07,6;CL:0000036,1.55e-07,6;CL:0000357,1.55e-07,6;CL:0000114,1.55e-07,6;CL:0002231,1.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.07e-14;3!CL:0000223;7.14e-13;58!CL:0000357;1.75e-07;6!CL:0000114;1.75e-07;6 | |||
|ontology_enrichment_disease=DOID:305!1.95e-08!106;DOID:0050687!3.95e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.60e-13!169;UBERON:0000925!1.60e-13!169;UBERON:0006595!1.60e-13!169;UBERON:0005911!2.74e-10!82;UBERON:0005153!1.71e-09!37;UBERON:0001007!4.32e-09!155;UBERON:0001555!4.32e-09!155;UBERON:0007026!4.32e-09!155;UBERON:0000077!1.01e-08!130;UBERON:0001004!2.01e-08!72;UBERON:0003104!4.07e-08!238;UBERON:0009142!4.07e-08!238;UBERON:0005157!4.54e-08!51;UBERON:0006554!6.45e-08!44;UBERON:0003102!8.59e-08!95;UBERON:0000065!1.28e-07!53;UBERON:0004921!1.37e-07!129;UBERON:0004185!1.37e-07!129;UBERON:0001008!1.43e-07!45;UBERON:0000161!2.29e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.43e-18;12!UBERON:0000365;1.63e-15;5!UBERON:0001949;6.41e-15;3!UBERON:0004815;1.63e-14;3!UBERON:0002031;1.63e-14;3!UBERON:0005910;6.04e-13;6!UBERON:0001911;4.24e-11;4!UBERON:0007196;2.10e-10;15!UBERON:0001558;2.10e-10;15!UBERON:0005911;5.25e-09;36!UBERON:0002185;6.75e-09;5!UBERON:0006554;1.00e-08;30!UBERON:0001008;1.00e-08;30!UBERON:0004807;4.25e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.77e-15,5;UBERON:0001949,6.02e-15,3;UBERON:0004119,1.19e-14,160;UBERON:0000925,1.19e-14,160;UBERON:0006595,1.19e-14,160;UBERON:0004815,1.68e-14,3;UBERON:0002031,1.68e-14,3;UBERON:0005911,2.89e-14,82;UBERON:0006554,6.75e-14,47;UBERON:0001008,1.50e-13,48;UBERON:0005910,6.47e-13,6;UBERON:0001911,4.19e-11,4;UBERON:0005333,4.19e-11,4;UBERON:0008425,4.19e-11,4;UBERON:0005311,4.19e-11,4;UBERON:0007196,2.60e-10,15;UBERON:0001558,2.60e-10,15;UBERON:0005157,6.45e-10,47;UBERON:0002185,6.88e-09,5;UBERON:0005153,1.08e-08,37;UBERON:0003929,2.74e-08,54;UBERON:0001007,4.66e-07,145;UBERON:0001555,4.66e-07,145;UBERON:0007026,4.66e-07,145;UBERON:0005177,6.94e-07,101 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,2.09340350391728,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,2.75826367343678,1.8072355126695,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0,0,0,2.91436230634034,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0,0.169560592310488,2.51239109112286,1.63647672354501,2.00763216772303,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,0,0,0.122988438543114,0,1.86575485194663,0,2.91534019993729,1.11106134190236,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,1.27597587518148,1.16426079513703,1.74380363108377,3.4504441124869,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.22001485746285,0,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0.561320188866147,0,0,0,0,0.308419387605311,0.887808626565635,0.328508624055237,0,1.39452454151951,0.483437798366489,2.20557117333613,3.95948252424354,0,0.182091168006717,0,0.902399225814824,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.618246069886334,0,0,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0.275673144969061,0,0,0.340906509664404,0,1.81813406897076,0.768760269460425,0.382838137483752,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0,0,1.44333169088268,1.34060455107157,1.08890984861323,0.0941438007767792,1.29151611801369,5.05414427002877,6.20802214951346,1.37834040124176,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,1.25314822272926,0,0,0,0,0,0,0,0,0.0874599999961957,0,1.137934482855,0.508507300585533,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,1.25481369850743,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.685946781900644,0,0,0.171986032471617,0,0,0.0821154570532092,0.290967049465258,0,0.451961481561065,0.274083849293502,0.397429223405979,0,1.17330829640882,0.240476460754601,0.640358984218058,0,0.144090417154106,0.114536596165916,0,0,0,0.707082103850386,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0,0,0.393915911536118,0.0824158583811665,0.471824806979294,0.196854963029498,0,0,0,0,0,0.83088067605837,0,0,0,0.670869375198532,1.10327990218877,0.104909176269996,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0.340776043570843,0,0.732761168390412,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0.468334905806882,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0.813741466409323,0.545545977607678,0,0,0,0,0.343395705182793,0,0,0.385239660814607,0.643324774124777,0,0,0.463044948647668,0,0.537266523244462,0.617602894321944,0.219284049578707,0.883445729729405,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0.419638523158333,2.48830904013189,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.733714394086716,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0.255524855279191,0,0,0,0,1.1531308121143,0,0,0,0,0.827356886187777,1.4460082245969,0.078493092850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| |||
|short_description=p@chr2:20402086..20402095,- | |||
}} |
Revision as of 01:55, 21 January 2014
Short description: | p@chr2:20402086..20402095, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402086..20402095, - |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.60e-21 | 42 |
respiratory epithelial cell | 5.46e-21 | 13 |
epithelial cell | 4.05e-20 | 253 |
transitional epithelial cell | 2.60e-19 | 4 |
urothelial cell | 2.60e-19 | 4 |
endodermal cell | 3.82e-19 | 58 |
epithelial cell of tracheobronchial tree | 1.44e-17 | 9 |
epithelial cell of lower respiratory tract | 1.44e-17 | 9 |
gingival epithelial cell | 6.02e-15 | 3 |
bronchial epithelial cell | 1.68e-14 | 3 |
duct epithelial cell | 6.92e-14 | 3 |
branched duct epithelial cell | 6.92e-14 | 3 |
tracheal epithelial cell | 6.92e-14 | 3 |
tracheoblast | 6.92e-14 | 3 |
general ecto-epithelial cell | 1.08e-11 | 14 |
mammary gland epithelial cell | 4.19e-11 | 4 |
corneal epithelial cell | 1.09e-10 | 2 |
stratified squamous epithelial cell | 1.55e-07 | 6 |
keratin accumulating cell | 1.55e-07 | 6 |
stratified epithelial cell | 1.55e-07 | 6 |
keratinizing barrier epithelial cell | 1.55e-07 | 6 |
epithelial fate stem cell | 1.55e-07 | 6 |
stratified epithelial stem cell | 1.55e-07 | 6 |
surface ectodermal cell | 1.55e-07 | 6 |
epithelial cell of prostate | 1.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.77e-15 | 5 |
gingival epithelium | 6.02e-15 | 3 |
endoderm-derived structure | 1.19e-14 | 160 |
endoderm | 1.19e-14 | 160 |
presumptive endoderm | 1.19e-14 | 160 |
lower respiratory tract epithelium | 1.68e-14 | 3 |
epithelium of bronchus | 1.68e-14 | 3 |
endo-epithelium | 2.89e-14 | 82 |
urinary system structure | 6.75e-14 | 47 |
renal system | 1.50e-13 | 48 |
transitional epithelium | 6.47e-13 | 6 |
mammary gland | 4.19e-11 | 4 |
mammary bud | 4.19e-11 | 4 |
mammary ridge | 4.19e-11 | 4 |
mammary placode | 4.19e-11 | 4 |
tracheobronchial tree | 2.60e-10 | 15 |
lower respiratory tract | 2.60e-10 | 15 |
epithelial fold | 6.45e-10 | 47 |
bronchus | 6.88e-09 | 5 |
epithelial bud | 1.08e-08 | 37 |
gut epithelium | 2.74e-08 | 54 |
digestive system | 4.66e-07 | 145 |
digestive tract | 4.66e-07 | 145 |
primitive gut | 4.66e-07 | 145 |
trunk region element | 6.94e-07 | 101 |