FFCP PHASE1:Hg19::chr2:42795598..42795609,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23784 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000407270_5end | |||
|description=CAGE_peak_9_at_MTA3_5end | |||
|id=chr2:42795598..42795609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.00e-14;5!CL:0000540;4.09e-12;6!CL:0000404;4.09e-12;6!CL:0002321;2.15e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.87e-15,8;CL:0002322,7.24e-15,5;CL:0000540,5.17e-12,6;CL:0000031,5.17e-12,6;CL:0000404,5.17e-12,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.09e-12;6!UBERON:0005425;4.90e-09;1!UBERON:0009117;9.94e-08;10!UBERON:0005564;9.94e-08;10 | |||
|ontology_enrichment_disease=DOID:0050687!4.78e-11!143;DOID:3095!2.03e-09!22;DOID:2994!2.03e-09!22;DOID:305!2.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.90e-09;1!DOID:1357;4.90e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.22e-09,1;DOID:1357,6.22e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.92e-16!94;UBERON:0001016!5.92e-16!94;UBERON:0000924!1.10e-13!173;UBERON:0006601!1.10e-13!173;UBERON:0005743!1.79e-13!86;UBERON:0001017!3.18e-13!82;UBERON:0004121!1.01e-12!169;UBERON:0002346!5.40e-11!90;UBERON:0003075!5.41e-10!86;UBERON:0007284!5.41e-10!86;UBERON:0001049!8.62e-10!57;UBERON:0005068!8.62e-10!57;UBERON:0006241!8.62e-10!57;UBERON:0007135!8.62e-10!57;UBERON:0000956!1.26e-09!25;UBERON:0000203!1.26e-09!25;UBERON:0002616!5.71e-09!59;UBERON:0002020!9.51e-09!34;UBERON:0003528!9.51e-09!34;UBERON:0000955!1.31e-08!69;UBERON:0006238!1.31e-08!69;UBERON:0001869!1.42e-08!32;UBERON:0001893!2.42e-08!34;UBERON:0002791!5.02e-08!33;UBERON:0003056!1.02e-07!61;UBERON:0002619!1.27e-07!22;UBERON:0000033!1.33e-07!123;UBERON:0000153!1.69e-07!129;UBERON:0007811!1.69e-07!129;UBERON:0001950!1.86e-07!20;UBERON:0000922!2.19e-07!612;UBERON:0002780!3.23e-07!41;UBERON:0001890!3.23e-07!41;UBERON:0006240!3.23e-07!41;UBERON:0003080!6.97e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-09;8!UBERON:0000941;4.90e-09;1!UBERON:0001764;4.90e-09;1!UBERON:0001785;4.90e-09;1!UBERON:0002464;4.90e-09;1!UBERON:0004904;4.90e-09;1!UBERON:0001825;4.90e-09;1!UBERON:0001021;4.90e-09;1!UBERON:0000922;4.79e-08;49!UBERON:0003135;4.59e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-09,8;UBERON:0000941,3.88e-09,1;UBERON:0001785,3.88e-09,1;UBERON:0002464,3.88e-09,1;UBERON:0004904,3.88e-09,1;UBERON:0001021,3.88e-09,1;UBERON:0003902,3.88e-09,1;UBERON:0005425,3.88e-09,1;UBERON:0001764,6.22e-09,1;UBERON:0001825,6.22e-09,1;UBERON:0003135,4.60e-07,11 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0,0.313454721478088,0.85870796139317,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0.919421224478927,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.527008714158756,1.0478326039817,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0,0,0,0,1.70763188581434,0.795178609928912,1.62671520017326,0.829288440122964,1.51392510525377,2.18986415445498,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0.790204397959275,0,0.246217006087397,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,1.00509759200609,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0.096670718292122,0,0,0.137836572484531,0,0.435050081742686,0.0852266274161009,0.178064071293475,0.330569830721956,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0.21787692703798,0,0.230850775511391,0.113942055847001,0.23056390438806,1.16684937732704,0.54323685961004,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0.424059214301822,0.216388639742091,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,0,1.22429104652196,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.290268993867255,0,0.0821154570532092,0.290967049465258,0.176512253383001,0,0,0,0.126621591911757,0,0.160317640503067,0,0,0,0.572682980829578,0.171594997861965,0,0,0.235694034616795,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.741742725430498,0.943649613958588,0,0,0,0.681017030557878,1.44677833618517,1.37539436597234,0.415440338029185,0,0,0.121499113316049,0,0,0.629455057619977,0,0.35857467866569,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,1.40963004463334,0,0,0,0,0,0.121792598380896,0,0,0,0,0,1.25643277000187,0,0.488105059607853,0.1251909307065,0,0.110929051536852,0.558867626472451,0.415045904808692,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0.256241518587947,0,0,0.414775308455192,0.194860308839388,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,1.15104934173287,0.323474434190045,0.314531883711793,0.982886743728125,0,1.06287460050841,0.123935764259002,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0.159633859057151,1.02558182120378,0.504143392443436,0.345786262321089,0.161475645631851,1.42769420259154,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0.397832444232549,0.300841313397029,0,0,0,0.163771917510097,0.147856086217045,0.135075169236789,0,0.206686796501184,0.253663240775627,1.64092442705466,0.548257766857182,0,0.351742488719241,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.328863867814245,0.118193840883968,0,0,0.157115589916002,0.840816489941367,0,0.215927591218621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| |||
|short_description=p9@MTA3 | |||
}} |
Revision as of 02:48, 21 January 2014
Short description: | p9@MTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MTA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000407270_5end |
EntrezGene: | MTA3 |
HGNC: | 23784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.87e-15 | 8 |
embryonic stem cell | 7.24e-15 | 5 |
neuron | 5.17e-12 | 6 |
neuroblast | 5.17e-12 | 6 |
electrically signaling cell | 5.17e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-09 | 8 |
cranial nerve II | 3.88e-09 | 1 |
cranial nerve | 3.88e-09 | 1 |
nerve trunk | 3.88e-09 | 1 |
nerve connecting eye with brain | 3.88e-09 | 1 |
nerve | 3.88e-09 | 1 |
retinal neural layer | 3.88e-09 | 1 |
presumptive neural retina | 3.88e-09 | 1 |
maxillary sinus | 6.22e-09 | 1 |
paranasal sinus | 6.22e-09 | 1 |
male reproductive organ | 4.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.22e-09 | 1 |
maxillary sinus cancer | 6.22e-09 | 1 |