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FFCP PHASE1:Hg19::chr2:142889034..142889073,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=53353|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6693|TSSclassifier=N|UniProt=Q9NZR2,Q96NT6|association_with_transcript=196bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end|coexpression_cluster_id=C108|description=CAGE_peak_4_at_LRP1B_5end|id=chr2:142889034..142889073,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.55e-23;82!UBERON:0006241;2.61e-08;3!UBERON:0003057;2.61e-08;3!UBERON:0006215;1.40e-07;3|ontology_enrichment_disease=DOID:0050687!5.00e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.23e-54!57;UBERON:0005068!3.23e-54!57;UBERON:0006241!3.23e-54!57;UBERON:0007135!3.23e-54!57;UBERON:0002616!2.94e-52!59;UBERON:0001017!8.16e-52!82;UBERON:0005743!8.43e-50!86;UBERON:0000955!2.12e-49!69;UBERON:0006238!2.12e-49!69;UBERON:0000073!2.38e-45!94;UBERON:0001016!2.38e-45!94;UBERON:0003080!1.16e-41!42;UBERON:0002346!3.59e-41!90;UBERON:0007023!4.26e-41!115;UBERON:0002780!6.13e-41!41;UBERON:0001890!6.13e-41!41;UBERON:0006240!6.13e-41!41;UBERON:0003075!4.28e-38!86;UBERON:0007284!4.28e-38!86;UBERON:0002020!1.89e-34!34;UBERON:0003528!1.89e-34!34;UBERON:0001893!5.03e-34!34;UBERON:0002791!4.39e-33!33;UBERON:0001869!4.57e-32!32;UBERON:0000153!1.93e-30!129;UBERON:0007811!1.93e-30!129;UBERON:0000033!6.02e-30!123;UBERON:0000924!1.66e-29!173;UBERON:0006601!1.66e-29!173;UBERON:0003056!7.90e-29!61;UBERON:0004121!4.61e-27!169;UBERON:0000956!1.03e-24!25;UBERON:0000203!1.03e-24!25;UBERON:0002619!3.45e-22!22;UBERON:0001950!6.23e-20!20;UBERON:0000475!2.00e-15!365;UBERON:0000477!2.30e-13!286;UBERON:0003076!2.96e-13!15;UBERON:0003057!2.96e-13!15;UBERON:0000481!9.33e-13!347;UBERON:0000062!2.61e-11!511;UBERON:0002420!3.19e-11!9;UBERON:0007245!3.19e-11!9;UBERON:0010009!3.19e-11!9;UBERON:0010011!3.19e-11!9;UBERON:0000454!3.19e-11!9;UBERON:0002308!3.83e-11!9;UBERON:0000125!3.83e-11!9;UBERON:0000922!1.27e-10!612;UBERON:0000025!1.57e-10!194;UBERON:0004733!3.00e-10!12;UBERON:0002028!3.00e-10!12;UBERON:0007277!3.00e-10!12;UBERON:0000468!4.63e-10!659;UBERON:0004111!1.21e-09!241;UBERON:0002050!1.24e-09!605;UBERON:0005423!1.24e-09!605;UBERON:0002298!1.25e-09!8;UBERON:0000923!2.82e-09!604;UBERON:0005291!2.82e-09!604;UBERON:0006598!2.82e-09!604;UBERON:0002532!2.82e-09!604;UBERON:0004732!3.45e-09!13;UBERON:0000064!3.90e-09!219;UBERON:0009663!6.45e-09!7;UBERON:0001894!3.22e-08!7;UBERON:0006222!3.22e-08!7;UBERON:0000483!4.26e-08!309;UBERON:0000200!6.88e-08!6;UBERON:0000119!8.71e-08!312;UBERON:0001871!2.58e-07!7;UBERON:0002680!3.03e-07!9;UBERON:0001895!3.03e-07!9;UBERON:0010092!3.03e-07!9;UBERON:0000349!3.25e-07!5|ontology_enrichment_uberon_v019=UBERON:0003528;1.86e-56;34!UBERON:0002020;1.86e-56;34!UBERON:0002780;5.83e-56;41!UBERON:0001890;5.83e-56;41!UBERON:0001893;1.99e-55;34!UBERON:0000073;4.21e-55;53!UBERON:0002616;4.21e-55;53!UBERON:0002791;8.32e-55;32!UBERON:0001869;1.10e-54;32!UBERON:0000956;1.24e-45;25!UBERON:0000203;1.24e-45;25!UBERON:0002619;7.92e-44;22!UBERON:0001950;5.94e-39;20!UBERON:0000955;5.71e-32;68!UBERON:0001017;2.48e-30;75!UBERON:0001016;1.98e-28;83!UBERON:0002420;1.92e-22;9!UBERON:0007245;1.92e-22;9!UBERON:0010009;1.92e-22;9!UBERON:0010011;1.92e-22;9!UBERON:0000454;1.92e-22;9!UBERON:0000125;2.79e-22;9!UBERON:0002308;2.79e-22;9!UBERON:0009663;1.87e-17;7!UBERON:0001894;3.38e-16;7!UBERON:0007023;5.87e-16;114!UBERON:0004733;1.98e-15;12!UBERON:0002028;1.98e-15;12!UBERON:0000200;2.07e-15;6!UBERON:0002298;2.41e-15;6!UBERON:0004732;4.26e-14;13!UBERON:0000349;8.04e-14;5!UBERON:0001872;2.89e-12;5!UBERON:0002021;5.38e-12;5!UBERON:0011216;1.90e-11;132!UBERON:0000369;9.25e-11;4!UBERON:0002435;9.25e-11;4!UBERON:0000204;9.25e-11;4!UBERON:0003296;9.73e-10;4!UBERON:0010133;9.73e-10;4!UBERON:0002784;9.73e-10;4!UBERON:0001871;1.81e-09;6!UBERON:0002680;1.94e-09;9!UBERON:0001895;1.94e-09;9!UBERON:0001870;9.67e-09;3!UBERON:0000988;1.14e-08;3!UBERON:0005383;1.63e-08;3!UBERON:0005382;1.63e-08;3!UBERON:0001896;2.31e-08;3!UBERON:0005290;2.31e-08;3!UBERON:0002240;2.61e-08;3!UBERON:0005174;2.61e-08;3!UBERON:0001137;2.61e-08;3!UBERON:0010314;2.63e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.92e-102,56;UBERON:0005068,1.92e-102,56;UBERON:0006241,1.92e-102,56;UBERON:0007135,1.92e-102,56;UBERON:0000073,2.48e-95,53;UBERON:0002616,2.48e-95,53;UBERON:0001017,7.08e-81,81;UBERON:0002780,8.99e-81,41;UBERON:0001890,8.99e-81,41;UBERON:0003080,8.99e-81,41;UBERON:0006240,8.99e-81,41;UBERON:0000955,5.26e-77,68;UBERON:0006238,5.26e-77,68;UBERON:0001016,3.22e-74,89;UBERON:0002346,1.96e-67,86;UBERON:0003528,1.31e-66,34;UBERON:0002020,1.31e-66,34;UBERON:0003075,8.15e-66,82;UBERON:0007284,8.15e-66,82;UBERON:0001893,1.01e-65,34;UBERON:0002791,1.16e-61,32;UBERON:0001869,1.82e-61,32;UBERON:0010371,1.23e-53,104;UBERON:0003056,5.82e-51,61;UBERON:0007023,3.82e-50,114;UBERON:0000956,1.40e-45,25;UBERON:0000203,1.4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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=53353
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6693
|TSSclassifier=not
|UniProt=Q9NZR2,Q96NT6
|association_with_transcript=196bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end
|coexpression_cluster_id=C108
|description=CAGE_peak_4_at_LRP1B_5end
|id=chr2:142889034..142889073,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006601;1.55e-23;82!UBERON:0006241;2.61e-08;3!UBERON:0003057;2.61e-08;3!UBERON:0006215;1.40e-07;3
|ontology_enrichment_disease=DOID:0050687!5.00e-07!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p4@LRP1B
}}

Revision as of 05:39, 21 January 2014

Short description:p4@LRP1B
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_LRP1B_5end
Coexpression cluster:C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate
Association with transcript: 196bp_to_ENST00000389484, NM_018557, uc002tvj.1, uc010fnl.1_5end
EntrezGene:LRP1B
HGNC: 6693
UniProt: Q9NZR2Q96NT6
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data