FFCP PHASE1:Hg19::chr2:191745535..191745555,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4331 | |||
|TSSclassifier=strong | |||
|UniProt=O94925 | |||
|association_with_transcript=0bp_to_ENST00000320717,NM_014905,uc002usd.2,uc002use.2,uc002usf.2_5end | |||
|coexpression_cluster_id=C4161 | |||
|description=CAGE_peak_1_at_GLS_5end | |||
|id=chr2:191745535..191745555,+ | |||
|ontology_enrichment_celltype=CL:0000134!2.26e-12!358;CL:0002320!1.93e-10!365;CL:0000738!7.99e-10!140;CL:0002031!3.41e-08!124;CL:0002087!3.63e-08!119;CL:0000219!1.76e-07!390;CL:0000838!2.20e-07!52;CL:0000542!3.60e-07!53;CL:0000051!3.60e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000134,1.82e-13,354;CL:0002320,1.99e-11,361;CL:0000738,1.36e-10,136;CL:0002031,6.36e-09,120;CL:0002087,6.50e-09,115;CL:0000219,2.82e-08,386;CL:0000838,2.20e-07,52;CL:0000542,3.60e-07,53;CL:0000051,3.60e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.03e-10!375;UBERON:0002619!1.32e-09!22;UBERON:0001869!6.23e-09!32;UBERON:0001950!7.36e-09!20;UBERON:0002020!1.63e-08!34;UBERON:0003528!1.63e-08!34;UBERON:0001893!7.42e-08!34;UBERON:0003080!7.55e-08!42;UBERON:0002616!1.01e-07!59;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0002791!1.57e-07!33;UBERON:0000956!1.67e-07!25;UBERON:0000203!1.67e-07!25;UBERON:0002780!1.77e-07!41;UBERON:0001890!1.77e-07!41;UBERON:0006240!1.77e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.32e-09;22!UBERON:0001950;7.35e-09;20!UBERON:0001869;3.93e-08;32!UBERON:0003528;1.40e-07;34!UBERON:0002020;1.40e-07;34!UBERON:0002791;1.65e-07;32!UBERON:0000956;1.69e-07;25!UBERON:0000203;1.69e-07;25!UBERON:0001893;6.62e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.26e-11,371;UBERON:0002619,1.32e-09,22;UBERON:0001869,6.23e-09,32;UBERON:0001950,7.36e-09,20;UBERON:0003528,1.63e-08,34;UBERON:0002020,1.63e-08,34;UBERON:0002791,3.71e-08,32;UBERON:0001893,7.42e-08,34;UBERON:0000073,7.72e-08,53;UBERON:0002616,7.72e-08,53;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0002780,1.77e-07,41;UBERON:0001890,1.77e-07,41;UBERON:0003080,1.77e-07,41;UBERON:0006240,1.77e-07,41;UBERON:0001049,2.56e-07,56;UBERON:0005068,2.56e-07,56;UBERON:0006241,2.56e-07,56;UBERON:0007135,2.56e-07,56 | |||
|phase1_expression=229.278114639442,227.374756372224,232.715721162448,387.283664626615,345.500925992293,256.467526085508,116.517943957423,45.4838308867318,24.8126346789847,35.3856868562173,53.0328887659045,24.2469923064491,28.7506006269014,23.3918407094488,42.4188640931732,48.4074105445278,36.1616716814386,39.4367448809182,42.4501534947741,23.1467589184361,46.5121576036897,24.7629229967689,29.7685426616299,42.1573229224483,54.736590863334,86.8820423354206,88.1760330692417,77.9236735005424,54.2842702051488,76.3820502213453,53.2567464207301,26.6632155098889,27.1085326900425,15.1599144168383,78.2418725861046,82.8846625401668,57.2520856702952,90.8552469992279,144.191457731032,125.432283273762,36.7221377753476,57.0052852193404,44.0454220654459,54.2335430647776,47.9902448484788,94.3651998020605,83.9068823229521,76.0660592840378,157.330836414713,229.290836680754,117.577764296857,218.98254487683,247.872144449629,147.815992540696,246.476205601702,71.5320890261898,63.0413206633624,97.7547157336118,238.133268264562,119.064669045231,363.143487453855,141.176356479914,82.378490597734,166.653877458283,234.489064811896,179.861116227091,324.490391726695,213.058868137718,137.150007544513,189.171483738157,208.862828408512,147.679332031013,218.35904733421,38.0259515361495,34.8671051942671,37.7385561915077,40.9999503684707,37.0936925318521,32.145117339416,32.2064400427611,43.7616689837998,47.3100158250402,107.357709121407,86.2899005794168,86.2823976247648,122.898304099154,89.2883051090308,81.6148464735366,77.3422501158289,95.4053754535364,206.05509481762,132.128367608461,97.8619464000586,77.9810838616253,113.783238285252,64.0023326003437,132.582385056723,193.361295272589,215.059167953487,83.091688209167,112.443181988589,91.3754265068035,173.395788283041,85.340409974043,144.35689466267,120.957506442657,125.111385059437,106.828160651213,102.096587834504,93.2362919102844,104.183956705265,72.4507714337631,112.401214876842,97.919943080835,130.669404756221,82.6025108265257,142.558023619915,124.393135264712,122.461530937439,80.2784844096724,104.173352617027,80.7884237781118,105.854308711674,94.838078865424,89.950123117689,80.2674884429217,67.3324957475258,162.29342829591,254.870506581682,183.347695315623,260.873346955939,38.9006498628109,118.400732267109,111.323258934446,98.2622304846344,146.00529111251,38.1737254584528,200.493566564686,43.7696203469634,74.7228069448841,53.4913844871138,68.3055878720571,17.486173838042,14.0898088258083,104.179713363153,90.8957228702175,122.321323677356,71.5471872916026,81.7952722415583,89.8927153217547,26.2366377724051,42.1514951602001,30.5483641414683,33.9184765154406,39.4329470037312,58.6001429332344,30.931255047448,78.3002780283066,73.643616376149,102.089786893224,39.0744437595873,25.0889794887109,36.8533706897736,46.6932112039253,46.9882329771421,72.779278551525,83.5249266169352,73.5352967556094,44.4618248651061,37.021360723157,52.5789005080269,71.1614254154742,85.3116581126316,13.082821564276,305.140778340926,119.412572499699,620.866648833183,611.248838815722,101.43515730873,124.470427231592,35.2271685908026,59.6935467169527,99.898742363325,71.3966561969347,68.9809231138796,45.1045134381896,51.8558332031999,22.4948574560445,49.633452216021,19.3960419325113,43.7884634016777,55.5465178585008,62.9685753592032,65.4500759232478,57.1631679513701,38.0786383666481,54.9693155855072,53.4601285776924,97.4231701357514,30.0353249439549,25.1516349635683,36.1922645001242,49.6720523891698,68.7119006400774,98.3309870773077,149.566044349922,71.6635540984467,63.8623191190918,476.10009311824,189.638961270888,208.964854543328,265.88071113078,137.472074004077,773.179260676933,208.636995947712,349.19823140718,236.382174521068,461.448939318241,209.873768904442,102.968538193583,539.614580625254,142.866475286794,72.9110546935097,62.2299947185816,72.550468077162,63.6706201763589,48.7894824518382,49.0360142789495,34.974376803725,37.214318750518,39.8666944383493,31.3880528805214,71.9667848717153,191.68579958148,60.7793653950914,120.735661288315,88.791176245359,38.4497100129493,51.9240845440553,43.6229964089102,41.8014156655773,54.0341021349167,47.6913944413304,44.3595003846941,57.8853322119771,47.323900304406,50.9327263691007,53.2918740453094,58.4435096090588,88.2052268313252,3.80265104465493,7.86261773342101,33.67502468084,99.3291973682964,161.483819807108,53.1860211925429,68.9231792366168,16.8602629886429,40.1110599922407,38.8871469665824,23.1323896770331,31.1980435583874,51.9592831290984,43.2420410557037,95.3358597194872,25.8415941492322,21.2973335785241,38.2410845991542,16.5942923571448,18.8866955660872,42.3493250470323,93.1336975254166,82.4902950702442,118.104630823339,237.862693529585,130.858414754723,51.1379164633264,58.7080555798203,36.8047371998603,20.6918559916296,68.2375363602502,187.009960217776,170.926264752516,175.603224896095,29.2725292686899,31.705039321337,14.0660936652056,30.7930402840869,48.4317490632654,57.9662101638761,57.7369393913768,41.1521079547474,28.7733645429965,39.676012629134,146.464853953562,14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| |||
|short_description=p1@GLS | |||
}} |
Revision as of 07:35, 21 January 2014
Short description: | p1@GLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLS_5end |
Coexpression cluster: | C4161_Preadipocyte_migratory_Fibroblast_Smooth_Olfactory_endometrial_Adipocyte |
Association with transcript: | 0bp_to_ENST00000320717, NM_014905, uc002usd.2, uc002use.2, uc002usf.2_5end |
EntrezGene: | GLS |
HGNC: | 4331 |
UniProt: | O94925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal cell | 1.82e-13 | 354 |
connective tissue cell | 1.99e-11 | 361 |
leukocyte | 1.36e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.36e-09 | 120 |
nongranular leukocyte | 6.50e-09 | 115 |
motile cell | 2.82e-08 | 386 |
lymphoid lineage restricted progenitor cell | 2.20e-07 | 52 |
lymphocyte | 3.60e-07 | 53 |
common lymphoid progenitor | 3.60e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.26e-11 | 371 |
regional part of cerebral cortex | 1.32e-09 | 22 |
cerebral hemisphere | 6.23e-09 | 32 |
neocortex | 7.36e-09 | 20 |
brain grey matter | 1.63e-08 | 34 |
gray matter | 1.63e-08 | 34 |
regional part of telencephalon | 3.71e-08 | 32 |
telencephalon | 7.42e-08 | 34 |
regional part of nervous system | 7.72e-08 | 53 |
regional part of brain | 7.72e-08 | 53 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
regional part of forebrain | 1.77e-07 | 41 |
forebrain | 1.77e-07 | 41 |
anterior neural tube | 1.77e-07 | 41 |
future forebrain | 1.77e-07 | 41 |
neural tube | 2.56e-07 | 56 |
neural rod | 2.56e-07 | 56 |
future spinal cord | 2.56e-07 | 56 |
neural keel | 2.56e-07 | 56 |