FFCP PHASE1:Hg19::chr2:201560525..201560539,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000484406_5end | |||
|coexpression_cluster_id=C1076 | |||
|description=CAGE_peak_2_at_ENST00000484406_5end | |||
|id=chr2:201560525..201560539,+ | |||
|ontology_enrichment_celltype=CL:0000784!1.12e-12!3;CL:0000819!3.71e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0002032;8.53e-21;1!CL:0000785;8.53e-21;1!CL:0000557;8.53e-21;1!CL:0000819;8.53e-21;1!CL:0000784;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,9.43e-21,1;CL:0000785,4.52e-11,2;CL:0000955,4.52e-11,2;CL:0000818,4.52e-11,2;CL:0000954,4.52e-11,2;CL:0000816,4.52e-11,2;CL:0000784,6.34e-08,3;CL:0000817,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.18e-11;2!CL:0000954;4.30e-11;2 | |||
|ontology_enrichment_disease=DOID:2531!1.59e-12!51;DOID:0060083!1.59e-12!51;DOID:1240!3.27e-10!39;DOID:0060073!3.71e-10!1;DOID:8675!3.71e-10!1;DOID:8692!9.94e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:0060073;8.53e-21;1!DOID:8675;8.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,9.43e-21,1;DOID:8675,9.43e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.28e-12!7;UBERON:0002370!4.86e-10!4;UBERON:0005058!4.86e-10!4;UBERON:0009113!4.86e-10!4;UBERON:0003295!4.86e-10!4;UBERON:0005562!4.86e-10!4;UBERON:0000974!1.30e-08!10;UBERON:0003351!5.75e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.41e-41;2!UBERON:0005058;5.41e-41;2!UBERON:0009113;5.41e-41;2!UBERON:0004177;4.46e-17;5!UBERON:0005057;4.46e-17;5!UBERON:0002405;2.83e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.68e-21,4;UBERON:0005058,4.68e-21,4;UBERON:0009113,4.68e-21,4;UBERON:0003295,4.68e-21,4;UBERON:0005562,4.68e-21,4;UBERON:0003351,2.18e-14,6;UBERON:0004177,1.78e-12,7;UBERON:0005057,1.78e-12,7;UBERON:0000974,5.15e-09,10;UBERON:0003408,5.15e-09,10;UBERON:0001042,5.15e-09,10;UBERON:0009145,5.15e-09,10;UBERON:0006562,2.82e-08,11;UBERON:0009722,2.82e-08,11;UBERON:0007690,2.82e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62339686735876,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0.199579371432817,0,0,2.27235358192189,3.65036331547496,5.70586697582981,0,0,0,0,0.201799707191048,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630893960010027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,3.22944549180031,6.02124728669822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21401172950129,0 | |||
|short_description=p2@ENST00000484406 | |||
}} |
Revision as of 07:50, 21 January 2014
Short description: | p2@ENST00000484406 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000484406_5end |
Coexpression cluster: | C1076_thymus_acute_granulocyte_vein_CD34_Dendritic_Hodgkin |
Association with transcript: | -22bp_to_ENST00000484406_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 9.43e-21 | 1 |
mature B cell | 4.52e-11 | 2 |
pre-B-II cell | 4.52e-11 | 2 |
transitional stage B cell | 4.52e-11 | 2 |
small pre-B-II cell | 4.52e-11 | 2 |
immature B cell | 4.52e-11 | 2 |
plasmacytoid dendritic cell | 6.34e-08 | 3 |
precursor B cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.68e-21 | 4 |
hemolymphoid system gland | 4.68e-21 | 4 |
thymic region | 4.68e-21 | 4 |
pharyngeal gland | 4.68e-21 | 4 |
thymus primordium | 4.68e-21 | 4 |
pharyngeal epithelium | 2.18e-14 | 6 |
hemopoietic organ | 1.78e-12 | 7 |
immune organ | 1.78e-12 | 7 |
neck | 5.15e-09 | 10 |
gland of gut | 5.15e-09 | 10 |
chordate pharynx | 5.15e-09 | 10 |
pharyngeal region of foregut | 5.15e-09 | 10 |
pharynx | 2.82e-08 | 11 |
entire pharyngeal arch endoderm | 2.82e-08 | 11 |
early pharyngeal endoderm | 2.82e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 9.43e-21 | 1 |
lymphosarcoma | 9.43e-21 | 1 |