FFCP PHASE1:Hg19::chr21:43786634..43786650,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7031 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11755 | |||
|TSSclassifier=weak | |||
|UniProt=P04155 | |||
|association_with_transcript=0bp_to_NM_003225,uc002zax.1_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_1_at_TFF1_5end | |||
|id=chr21:43786634..43786650,- | |||
|ontology_enrichment_celltype=CL:0000244!1.85e-07!4;CL:0000731!1.85e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.35e-08;13!UBERON:0006595;8.23e-08;86 | |||
|ontology_enrichment_disease=DOID:305!3.46e-11!106;DOID:5093!6.06e-09!4;DOID:1612!6.06e-09!4;DOID:0050687!1.87e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.78e-12;4!DOID:1612;2.78e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.79e-12,4;DOID:1612,2.79e-12,4;DOID:305,1.48e-10,106;DOID:0050687,2.21e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.92e-21!129;UBERON:0004185!1.92e-21!129;UBERON:0004119!4.60e-20!169;UBERON:0000925!4.60e-20!169;UBERON:0006595!4.60e-20!169;UBERON:0001007!2.81e-18!155;UBERON:0001555!2.81e-18!155;UBERON:0007026!2.81e-18!155;UBERON:0000077!8.65e-16!130;UBERON:0005911!5.11e-13!82;UBERON:0001046!1.97e-10!19;UBERON:0005409!1.60e-09!35;UBERON:0001041!6.42e-09!98;UBERON:0000365!1.21e-08!5;UBERON:0000160!1.69e-08!27;UBERON:0007023!2.37e-08!115;UBERON:0000059!1.54e-07!11;UBERON:0003929!1.71e-07!54;UBERON:0005910!4.05e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.48e-20;33!UBERON:0005409;1.19e-19;22!UBERON:0000160;7.47e-16;17!UBERON:0000059;8.10e-11;11!UBERON:0004907;1.90e-08;5!UBERON:0001555;3.06e-08;54!UBERON:0001041;6.00e-08;14!UBERON:0001007;2.33e-07;81!UBERON:0001155;3.23e-07;9!UBERON:0000310;4.32e-07;10!UBERON:0003127;8.56e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.44e-18,118;UBERON:0005409,5.66e-17,25;UBERON:0004119,5.03e-16,160;UBERON:0000925,5.03e-16,160;UBERON:0006595,5.03e-16,160;UBERON:0000160,7.65e-16,17;UBERON:0001007,2.52e-15,145;UBERON:0001555,2.52e-15,145;UBERON:0007026,2.52e-15,145;UBERON:0000059,8.05e-11,11;UBERON:0011216,5.45e-09,223;UBERON:0004907,1.96e-08,5;UBERON:0001046,2.19e-07,19;UBERON:0001041,2.61e-07,87;UBERON:0005911,2.66e-07,82;UBERON:0001155,3.14e-07,9;UBERON:0000310,4.35e-07,10;UBERON:0003127,8.56e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44859552370032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,13.0137216013861,9.43315600639871,25.9890476401897,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,53.3769823277113,0,0,0,0,0,0,0,0,0,0,0,0,0,1764.52642064306,1795.95305110247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4565812970888,1.00253235151642,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,1.14499909393593,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,7.74909670808214,6.73885902670502,4.87773168890343,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18138918693974,0,0,0,0,0,0,0,0,0,0,0,0,3.58646378851925,4.42054264849836,16.8794941062365,0,0,0,1.3480252672099,67.8490252020559,0,0.197286811273867,0,0,0,0,0,4275.44255373627,37.7827199983565,16.6749902350003,0,0,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,2.30850775511391,0,0.922255617552241,6.82158097514268,4.88913173649036,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,10.7428334289795,0,10.9478812418636,8.40346862781722,23.8301756524114,0.296521128680622,0,0,6.20090423422229,0,0,0,0,0,0,267.389482467547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09620260125072,2.33885814675794,2.79192553980911,2.03676934625681,0,17.8524785216621,0,0,0.0633107959558787,40.8702389915738,0.0801588202515337,1232.9044976145,0,9.36587711501689,0,2.05913997434357,2.0167671718341,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,2.6786281984456,1.81314888438566,2.56133466645903,4.2323817051342,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,1.36869470307464,0.704815022316672,0.747511887973863,0.628817220398664,2.48543433208317,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,1.74972571146949,0,0,10.1164302470214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,81.7148886782038,0,0,0,0,0,0,0,1.64477330057155,4.96211178389294,0,0.255524855279191,10.1783348816874,3.02655349996942,0,0,0,0,0,0,0,0,132.810293859131,2.8257513426185,0,2.5224494698241,9.13158720509496,0.431855182437243,0,0.0714765441766563,2.52821778772363,0,0,0,0,0,0,25.8136415292167,0,0,0.423387050190929,0,0,0,0,2.7482065412268,11.0945311733865,0,0,0,4.37139893753226,0,0.397901550322736,0,0,0.219881033490858,1.05673990496671,24.7729047526502,10.053739783182,493.833161179599,0,283.754562710358,0,0,0.4226557275834,0,0,0,0,0,0,0,6797.24076541034,1.83491713361816,0,0,0,0,241.765266115538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75731751132648,0.714193294391221,0.0645889098360061,0.124149428591716,0,0,0,4.57205170583619,1.36893320434112,41.2868084979422,52.3572099366537,61.5421659610125,0.651226148887796,0,0,0,9.38563769613817,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p1@TFF1 | |||
}} |
Revision as of 13:57, 21 January 2014
Short description: | p1@TFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFF1_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 0bp_to_NM_003225, uc002zax.1_5end |
EntrezGene: | TFF1 |
HGNC: | 11755 |
UniProt: | P04155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 3.44e-18 | 118 |
gastrointestinal system | 5.66e-17 | 25 |
endoderm-derived structure | 5.03e-16 | 160 |
endoderm | 5.03e-16 | 160 |
presumptive endoderm | 5.03e-16 | 160 |
intestine | 7.65e-16 | 17 |
digestive system | 2.52e-15 | 145 |
digestive tract | 2.52e-15 | 145 |
primitive gut | 2.52e-15 | 145 |
large intestine | 8.05e-11 | 11 |
organ system subdivision | 5.45e-09 | 223 |
lower digestive tract | 1.96e-08 | 5 |
hindgut | 2.19e-07 | 19 |
foregut | 2.61e-07 | 87 |
endo-epithelium | 2.66e-07 | 82 |
colon | 3.14e-07 | 9 |
breast | 4.35e-07 | 10 |
open tracheal system trachea | 8.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.79e-12 | 4 |
breast cancer | 2.79e-12 | 4 |
carcinoma | 1.48e-10 | 106 |
cell type cancer | 2.21e-08 | 143 |