FFCP PHASE1:Hg19::chr3:47844583..47844614,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22907 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16716 | |||
|TSSclassifier=strong | |||
|UniProt=F6R0H4 | |||
|association_with_transcript=0bp_to_ENST00000415400,ENST00000492893_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_DHX30_5end | |||
|id=chr3:47844583..47844614,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.09e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.96e-11;1!CL:0002625;2.96e-11;1!CL:0000216;2.96e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.78e-11,1;CL:0002625,1.78e-11,1;CL:0000216,1.78e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.74e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.23e-12;8!UBERON:0001136;2.96e-11;1!UBERON:0000941;2.96e-11;1!UBERON:0001343;2.96e-11;1!UBERON:0001785;2.96e-11;1!UBERON:0002464;2.96e-11;1!UBERON:0004904;2.96e-11;1!UBERON:0001021;2.96e-11;1!UBERON:0004910;2.96e-11;1!UBERON:0004813;2.96e-11;1!UBERON:0003135;6.10e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.51e-12,8;UBERON:0001136,1.78e-11,1;UBERON:0001343,1.78e-11,1;UBERON:0004910,1.78e-11,1;UBERON:0005154,1.78e-11,1;UBERON:0005295,1.78e-11,1;UBERON:0004813,1.78e-11,1;UBERON:0005297,1.78e-11,1;UBERON:0005294,1.78e-11,1;UBERON:0010141,1.78e-11,1;UBERON:0005891,1.78e-11,1;UBERON:0000941,2.68e-11,1;UBERON:0001785,2.68e-11,1;UBERON:0002464,2.68e-11,1;UBERON:0004904,2.68e-11,1;UBERON:0001021,2.68e-11,1;UBERON:0003902,2.68e-11,1;UBERON:0005425,2.68e-11,1;UBERON:0003135,5.33e-09,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0.436882744260345,0,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0.201606743224732,0,0,0,0,0.255725123687061,0,0.50133791063589,0,0,0,0,0,0,5.30465255765736,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.225222960966644,3.06633274931766,0.949265659568129,0,0,0,0,0,0.25326102332916,0.529636723252875,0,1.06400514659507,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0.226864366320042,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.10075209822764,0.169560592310488,0.386521706326594,0.545492241181669,0.573609190778008,0,0.265059536642971,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,2.76269842704961,0.464367928031979,0,0.591534000199219,0.842923450390509,0.964044119533928,0.992645754591546,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.514703430895577,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,1.44331342025273,0.115930404975077,0,0.433099343283221,0,0.761016608938393,0,0,0,0,0.148631162288728,0,0.671928512795438,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0.784917590417525,0,0.22001485746285,0.129271715757778,0,0,0,0,0.771622122786426,1.41849132023278,0,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.535286966391485,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,1.53512174720011,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.232420756919918,0,0.601519410909855,0.368323955743585,0.34444334449382,0.546273504020151,0.262248829918848,0.451199612907412,0.385076685522074,0,0,0,1.13733384070897,0.510281115829547,0.431831832204279,0,0.270946437543853,0,0.509752546090077,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0.656029291399411,0.325378394664303,0.103041011647722,0.0915694648183434,0.330037999682352,0,0.650060246036521,1.6068392984416,0,0.308097234229289,0.307007349452259,0,0.107420244868274,0.145016693914229,0.426133137080504,0.178064071293475,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.404364963146632,0,0.842516912477962,0,0.487426979262569,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.192444225451024,1.34060455107157,0,0,0.43050537267123,1.68471475667626,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0.213425530045242,0.318852545457645,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,1.23087398947712,0,0,0,0.37428108081644,0,0.242721043499027,0.111443384277478,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0.969332746095218,0.278304294485554,0,0.520855522170466,0,0,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0.10893846351899,0.139423744278603,0,0.113942055847001,0.23056390438806,0,0.325942115766024,0,0.183195186803725,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.247127877893006,0,0.202203398942031,0,0.702793337176017,0,0.391329237864179,0.242780379534093,0,0,0.61214552326098,0.063186579628488,0.60129367765797,0,0,0,0.313932918407225,0,0,0.138674673013139,0.867798691675654,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0.365446585430928,0.492692742319255,0,0.0882561266915003,0,0.274083849293502,0.59614383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| |||
|short_description=p6@DHX30 | |||
}} |
Revision as of 18:44, 21 January 2014
Short description: | p6@DHX30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DHX30_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000415400, ENST00000492893_5end |
EntrezGene: | DHX30 |
HGNC: | 16716 |
UniProt: | F6R0H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.78e-11 | 1 |
seminiferous tubule epithelial cell | 1.78e-11 | 1 |
Sertoli cell | 1.78e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 3.51e-12 | 8 |
mesothelium | 1.78e-11 | 1 |
seminiferous tubule of testis | 1.78e-11 | 1 |
epithelium of male gonad | 1.78e-11 | 1 |
epithelial cord | 1.78e-11 | 1 |
sex cord | 1.78e-11 | 1 |
seminiferous tubule epithelium | 1.78e-11 | 1 |
testis sex cord | 1.78e-11 | 1 |
genital ridge | 1.78e-11 | 1 |
primitive sex cord of indifferent gonad | 1.78e-11 | 1 |
coelomic epithelium | 1.78e-11 | 1 |
cranial nerve II | 2.68e-11 | 1 |
cranial nerve | 2.68e-11 | 1 |
nerve trunk | 2.68e-11 | 1 |
nerve connecting eye with brain | 2.68e-11 | 1 |
nerve | 2.68e-11 | 1 |
retinal neural layer | 2.68e-11 | 1 |
presumptive neural retina | 2.68e-11 | 1 |
male reproductive organ | 5.33e-09 | 11 |