FFCP PHASE1:Hg19::chr3:169755771..169755797,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23693 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJ42 | |||
|association_with_transcript=36bp_to_NM_014373,uc003fgi.2,uc010hwq.2_5end | |||
|description=CAGE_peak_1_at_GPR160_5end | |||
|id=chr3:169755771..169755797,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.33e-54!172;CL:0000566!7.33e-54!172;CL:0002032!2.51e-51!165;CL:0000837!2.51e-51!165;CL:0000988!5.36e-49!182;CL:0000738!6.32e-43!140;CL:0000763!4.43e-37!112;CL:0000049!4.43e-37!112;CL:0002087!9.72e-37!119;CL:0002031!1.04e-33!124;CL:0000766!2.04e-25!76;CL:0002009!5.15e-24!65;CL:0002194!2.40e-23!63;CL:0000576!2.40e-23!63;CL:0000040!2.40e-23!63;CL:0000559!2.40e-23!63;CL:0000557!2.74e-22!71;CL:0000839!4.81e-21!70;CL:0002057!1.88e-19!42;CL:0000860!1.89e-19!45;CL:0000542!2.48e-12!53;CL:0000051!2.48e-12!53;CL:0000838!8.76e-12!52;CL:0000236!2.82e-09!14;CL:0000945!9.56e-09!24;CL:0000826!9.56e-09!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-17;33!CL:0002057;1.11e-17;33!CL:0000473;1.86e-16;39!CL:0000234;1.86e-16;39!CL:0000576;2.50e-15;48!CL:0000763;1.03e-12;100!CL:0000766;2.31e-11;69!CL:0002087;2.60e-11;104!CL:0000738;2.89e-10;136!CL:0000988;1.92e-09;177!CL:0000236;2.84e-09;13!CL:0000542;2.70e-08;53!CL:0000945;2.74e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.27e-56,168;CL:0002032,6.11e-54,161;CL:0000837,6.11e-54,161;CL:0000988,6.18e-52,177;CL:0000738,7.86e-45,136;CL:0000763,9.49e-40,108;CL:0000049,9.49e-40,108;CL:0002087,2.20e-38,115;CL:0002031,4.88e-35,120;CL:0000766,3.63e-27,72;CL:0002009,7.20e-26,61;CL:0002194,3.66e-25,59;CL:0000576,3.66e-25,59;CL:0000040,3.66e-25,59;CL:0000559,3.66e-25,59;CL:0000557,8.58e-24,67;CL:0000473,1.37e-22,48;CL:0000234,1.37e-22,48;CL:0000839,1.94e-22,66;CL:0000860,1.25e-20,42;CL:0002057,1.25e-20,42;CL:0000542,2.05e-12,53;CL:0000051,2.05e-12,53;CL:0000838,7.68e-12,52;CL:0000236,8.77e-10,14;CL:0000945,2.80e-08,24;CL:0000826,2.80e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;3.64e-15;42!CL:0000049;3.55e-12;108!CL:0000051;2.70e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!2.17e-13!39;DOID:2531!3.65e-13!51;DOID:0060083!3.65e-13!51;DOID:8692!2.12e-10!31;DOID:162!9.70e-09!235;DOID:0050686!1.20e-08!137;DOID:14566!3.10e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.52e-11;39!DOID:8692;7.76e-11;31!DOID:2531;2.39e-09;51!DOID:0060083;2.39e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.22e-14,39;DOID:2531,4.26e-14,51;DOID:0060083,4.26e-14,51;DOID:8692,3.47e-11,31;DOID:0050686,1.54e-08,137;DOID:162,4.02e-08,235;DOID:14566,2.07e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!9.43e-25!102;UBERON:0003061!9.43e-25!102;UBERON:0002193!4.94e-24!112;UBERON:0002371!6.26e-18!80;UBERON:0001474!6.90e-17!86;UBERON:0002405!1.79e-16!115;UBERON:0004765!4.64e-11!101;UBERON:0001434!4.64e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.39e-27,98;UBERON:0003061,7.39e-27,98;UBERON:0002193,2.33e-26,108;UBERON:0002405,1.28e-21,93;UBERON:0002371,1.52e-19,76;UBERON:0001474,3.52e-18,82;UBERON:0004765,1.12e-13,90;UBERON:0001434,5.47e-10,100 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0.872338524100369,0,0,0,6.63481628554074,5.58240934377942,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0.764134057479513,0.410502947249729,0.787107813136792,12.9810211360138,16.8884935162774,20.280912154406,0,0.6024118375565,0,22.2330865665466,15.6386155736164,11.7440175733939,13.8498852132969,19.853900299544,14.9737500793938,16.5697450937544,13.6035339727971,15.7121096256854,41.2930998133964,25.3176882271502,20.1344770785887,39.7453653108721,17.2690512969167,17.3435567701258,33.0846251170473,24.3352671202646,16.7902383220896,46.8854125801801,33.565203546359,24.3767675869815,54.0255514487275,28.9280519061317,26.9668181334102,56.3194361962461,26.9580382743919,28.7701706609569,40.2418586227794,24.5340298874607,20.4587880255693,34.5348993968015,22.1280237629545,13.7020894779026,45.2247597462138,18.7733850631273,19.3298071787554,39.9563671738023,22.4649357952414,18.3548184715713,9.92899845666126,9.14198489849687,9.22498040236854,31.7890026144581,24.328656640324,30.2164102990511,5.98526761856622,4.77400025277816,2.73996230646951,38.719173781491,38.7758413996113,40.9174256777235,58.4620404916115,50.8502903535736,43.6811854365407,37.6795577487371,33.3918814087377,31.8759262701291,29.3618594685469,36.3159566718967,5.28685314316103,1.68152568894461,13.695972408304,10.2289080459193,8.64623678048162,3.49522548299166,1.67186495390678,5.21475626613745,9.46895611469466,7.79306913631645,6.35039604245489,0,1.99380505125259,0.270803863765016,1.79327847615945,2.34106825607781,5.59088875652499,9.94860064029054,3.76744011455568,11.4180653634787,24.3462153561639,30.3153019034433,3.62589896632212,5.74830740402882,6.18529401868734,7.08455137654608,4.77848121486145,7.81300144627702,5.70271226669025,17.1655635748661,12.1587280596697,3.74792179657038,7.81364931745256,6.56902397536837,4.83856183739358,7.75576567772171,7.38604459802275,2.43806866313962,0,1.79007586580942,0.361439152384566,0,0.724232594804119,0,0,0.378139268656271,0.443458794925128,0.263504357079378,8.71010852059789,0.728590576585084,0,12.6573483525327,9.22887607686116,8.90818335476397,22.6566093090075,32.0317150036872,21.5445350771148,1.78886166630035,2.58070378531837,0,0.56530794192401,1.67799774483962,0.550236083880135,1.04497483268405,5.42675194255591,12.8075854567216,9.0374565446461,3.22263453687318,2.28081631715554,3.1728067481262,4.04429388380456,0.81014194788176,2.41109266367015,1.79623498100936,1.46394924628319,1.53316637465883,0,1.28241220751285,64.572404543671,174.501118866746,0,0.496971951695318,0.379891534993739,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0.336672227908132,0,1.6623846929051,0,0,2.10333282469236,0.567160915800105,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0.286804595389004,4.63500083292463,3.71083351300159,3.83440011469411,2.69518743039963,4.54177531576131,3.6497735907583,0,0.643240938192885,0,0,0.721879481669586,2.72105640091641,1.51726221070292,1.20505514941741,2.42646740011267,1.96091499683166,3.55905928666645,2.96628877952362,1.76599318612811,2.69323009862473,9.59602091012043,1.40241773803446,0,0,0,0.982827216677626,2.95394953340702,1.32438929824395,11.8068901001389,0.343135620597051,0.109750285408626,0,0.301586917234893,0.925884451585296,0,1.03993478527958,0,5.44872903382861,0.70445216541493,1.73239737313289,1.38895653772983,2.85381228351897,9.4824527755113,0.858486162094873,19.6973604869918,2.57404691653161,7.58018927672514,0.93733833986777,0.503946384596579,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0.704387472105808,2.90259361757081,2.45003920808834,1.64115163454294,0.571481048629521,0.381988425558278,1.17217447210047,1.71072446022705,0.514137463516618,0.600686115687835,0,0,0,0.36669142910475,0.129271715757778,0,2.535908257668,0,0,0,0,0,0,0,0,0.65147236858747,0.710783897485092,0,0,0,0.399891964728228,20.6760427090024,49.7234520517805,23.1917333431335,0,0,0,0.434343920002738,0,0.179060963239896,34.6343094939999,6.5020150866636,8.40947541952118,7.57223914050515,0.254094624222463,0,0,1.17261385734044,0,101.11594823287,77.7819793930465,261.496188978138,0,0,0,0.831883446123229,0.535286966391485,0.473107245101804,1.63997980989798,0,0,0,0,0,0.60818530127658,0,0,14.0602257763563,14.6685656556659,11.4198486849685,0,1.66435439510497,0,0.992431231275107,0,0,0.512556597022804,0,0.482561763430822,0,0.925258162815933,0,0.657017248110473,0,0.464841513839837,9.7896154169214,0.802025881213139,0.920809889358963,0.459257792658427,0.182091168006717,0.262248829918848,4.06079651616671,16.0191901177183,0.784349769176855,2.92278449306521,7.8108205380728,2.27466768141793,1.87103075804167,1.51141141271498,6.16909010761157,0.812839312631559,0.5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| |||
|short_description=p1@GPR160 | |||
}} |
Revision as of 22:30, 21 January 2014
Short description: | p1@GPR160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR160_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_NM_014373, uc003fgi.2, uc010hwq.2_5end |
EntrezGene: | GPR160 |
HGNC: | 23693 |
UniProt: | Q9UJ42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.27e-56 | 168 |
hematopoietic oligopotent progenitor cell | 6.11e-54 | 161 |
hematopoietic multipotent progenitor cell | 6.11e-54 | 161 |
hematopoietic cell | 6.18e-52 | 177 |
leukocyte | 7.86e-45 | 136 |
myeloid cell | 9.49e-40 | 108 |
common myeloid progenitor | 9.49e-40 | 108 |
nongranular leukocyte | 2.20e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 4.88e-35 | 120 |
myeloid leukocyte | 3.63e-27 | 72 |
macrophage dendritic cell progenitor | 7.20e-26 | 61 |
monopoietic cell | 3.66e-25 | 59 |
monocyte | 3.66e-25 | 59 |
monoblast | 3.66e-25 | 59 |
promonocyte | 3.66e-25 | 59 |
granulocyte monocyte progenitor cell | 8.58e-24 | 67 |
defensive cell | 1.37e-22 | 48 |
phagocyte | 1.37e-22 | 48 |
myeloid lineage restricted progenitor cell | 1.94e-22 | 66 |
classical monocyte | 1.25e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-20 | 42 |
lymphocyte | 2.05e-12 | 53 |
common lymphoid progenitor | 2.05e-12 | 53 |
lymphoid lineage restricted progenitor cell | 7.68e-12 | 52 |
B cell | 8.77e-10 | 14 |
lymphocyte of B lineage | 2.80e-08 | 24 |
pro-B cell | 2.80e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.39e-27 | 98 |
blood island | 7.39e-27 | 98 |
hemolymphoid system | 2.33e-26 | 108 |
immune system | 1.28e-21 | 93 |
bone marrow | 1.52e-19 | 76 |
bone element | 3.52e-18 | 82 |
skeletal element | 1.12e-13 | 90 |
skeletal system | 5.47e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.22e-14 | 39 |
hematologic cancer | 4.26e-14 | 51 |
immune system cancer | 4.26e-14 | 51 |
myeloid leukemia | 3.47e-11 | 31 |
organ system cancer | 1.54e-08 | 137 |
cancer | 4.02e-08 | 235 |
disease of cellular proliferation | 2.07e-07 | 239 |