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FFCP PHASE1:Hg19::chr4:46126063..46126087,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=2565|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4086|TSSclassifier=S|UniProt=F5H2S0,Q8N1C3|association_with_transcript=0bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_GABRG1_5end|id=chr4:46126063..46126087,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.49e-25;82!UBERON:0006215;1.25e-11;3!UBERON:0006241;3.23e-11;3!UBERON:0003057;3.23e-11;3!UBERON:0010122;4.65e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.74e-104!57;UBERON:0005068!6.74e-104!57;UBERON:0006241!6.74e-104!57;UBERON:0007135!6.74e-104!57;UBERON:0002616!2.04e-87!59;UBERON:0001017!1.46e-86!82;UBERON:0002780!1.06e-82!41;UBERON:0001890!1.06e-82!41;UBERON:0006240!1.06e-82!41;UBERON:0000955!2.24e-82!69;UBERON:0006238!2.24e-82!69;UBERON:0005743!6.18e-82!86;UBERON:0003080!1.65e-80!42;UBERON:0007023!2.21e-75!115;UBERON:0000073!6.41e-73!94;UBERON:0001016!6.41e-73!94;UBERON:0003075!2.21e-70!86;UBERON:0007284!2.21e-70!86;UBERON:0002346!2.35e-69!90;UBERON:0002020!1.02e-66!34;UBERON:0003528!1.02e-66!34;UBERON:0001893!1.51e-66!34;UBERON:0002791!3.10e-64!33;UBERON:0001869!6.26e-62!32;UBERON:0003056!2.44e-52!61;UBERON:0002619!2.42e-51!22;UBERON:0001950!3.99e-46!20;UBERON:0000956!1.21e-44!25;UBERON:0000203!1.21e-44!25;UBERON:0000033!9.89e-43!123;UBERON:0000153!3.98e-40!129;UBERON:0007811!3.98e-40!129;UBERON:0000924!2.39e-36!173;UBERON:0006601!2.39e-36!173;UBERON:0004121!4.87e-36!169;UBERON:0000025!1.62e-24!194;UBERON:0002420!7.56e-24!9;UBERON:0007245!7.56e-24!9;UBERON:0010009!7.56e-24!9;UBERON:0010011!7.56e-24!9;UBERON:0000454!7.56e-24!9;UBERON:0002308!1.53e-23!9;UBERON:0000125!1.53e-23!9;UBERON:0003076!3.50e-23!15;UBERON:0003057!3.50e-23!15;UBERON:0009663!8.15e-19!7;UBERON:0004111!5.85e-18!241;UBERON:0001894!4.15e-17!7;UBERON:0006222!4.15e-17!7;UBERON:0004733!1.10e-16!12;UBERON:0002028!1.10e-16!12;UBERON:0007277!1.10e-16!12;UBERON:0000200!3.23e-16!6;UBERON:0000477!3.98e-16!286;UBERON:0001871!5.19e-16!7;UBERON:0002298!1.48e-15!8;UBERON:0004732!2.98e-15!13;UBERON:0000349!2.95e-14!5;UBERON:0001872!3.67e-13!5;UBERON:0000483!3.68e-13!309;UBERON:0002021!5.80e-13!5;UBERON:0000119!6.72e-13!312;UBERON:0000369!6.07e-12!4;UBERON:0002435!6.07e-12!4;UBERON:0000204!6.07e-12!4;UBERON:0010082!6.07e-12!4;UBERON:0000064!1.65e-11!219;UBERON:0000475!6.96e-11!365;UBERON:0002680!3.48e-10!9;UBERON:0001895!3.48e-10!9;UBERON:0010092!3.48e-10!9;UBERON:0000062!5.85e-10!511;UBERON:0003296!7.71e-10!4;UBERON:0010133!7.71e-10!4;UBERON:0005383!1.40e-09!3;UBERON:0005382!1.40e-09!3;UBERON:0002771!3.33e-09!3;UBERON:0001896!6.30e-09!3;UBERON:0005290!6.30e-09!3;UBERON:0010096!6.30e-09!3;UBERON:0006331!1.41e-08!3;UBERON:0000988!1.45e-08!3;UBERON:0002240!1.60e-08!3;UBERON:0000481!5.46e-08!347;UBERON:0000922!5.53e-07!612;UBERON:0001873!5.94e-07!2;UBERON:0010122!5.94e-07!2;UBERON:0001954!7.82e-07!2;UBERON:0003022!7.82e-07!2;UBERON:0002421!7.82e-07!2;UBERON:0002600!7.82e-07!2;UBERON:0000923!8.92e-07!604;UBERON:0005291!8.92e-07!604;UBERON:0006598!8.92e-07!604;UBERON:0002532!8.92e-07!604;UBERON:0002050!9.78e-07!605;UBERON:0005423!9.78e-07!605|ontology_enrichment_uberon_v019=UBERON:0001893;2.11e-78;34!UBERON:0003528;3.65e-78;34!UBERON:0002020;3.65e-78;34!UBERON:0002780;9.88e-78;41!UBERON:0001890;9.88e-78;41!UBERON:0001869;7.58e-77;32!UBERON:0002791;7.98e-77;32!UBERON:0000073;1.98e-73;53!UBERON:0002616;1.98e-73;53!UBERON:0002619;4.26e-71;22!UBERON:0001950;8.07e-64;20!UBERON:0000956;3.22e-62;25!UBERON:0000203;3.22e-62;25!UBERON:0000955;1.72e-51;68!UBERON:0001017;1.54e-49;75!UBERON:0001016;3.17e-39;83!UBERON:0002420;1.54e-32;9!UBERON:0007245;1.54e-32;9!UBERON:0010009;1.54e-32;9!UBERON:0010011;1.54e-32;9!UBERON:0000454;1.54e-32;9!UBERON:0000125;4.18e-32;9!UBERON:0002308;4.18e-32;9!UBERON:0009663;1.55e-25;7!UBERON:0004733;5.29e-23;12!UBERON:0002028;5.29e-23;12!UBERON:0000200;6.67e-22;6!UBERON:0002298;2.40e-21;6!UBERON:0004732;4.23e-21;13!UBERON:0000349;3.63e-19;5!UBERON:0007023;5.81e-19;114!UBERON:0001871;2.34e-18;6!UBERON:0001872;1.11e-17;5!UBERON:0002021;2.01e-17;5!UBERON:0001894;2.10e-17;7!UBERON:0000369;5.77e-16;4!UBERON:0002435;5.77e-16;4!UBERON:0000204;5.77e-16;4!UBERON:0011216;4.29e-15;132!UBERON:0002784;2.38e-14;4!UBERON:0002680;6.82e-14;9!UBERON:0001895;6.82e-14;9!UBERON:0005383;1.06e-12;3!UBERON:0005382;1.06e-12;3!UBERON:0001870;2.89e-12;3!UBERON:0001896;8.10e-12;3!UBERON:0005290;8.10e-12;3!UBERON:0000988;2.86e-11;3!UBERON:0002240;3.23e-11;3!UBERON:0005174;3.23e-11;3!UBERON:0001137;3.23e-11;3!UBERON:0010314;1.48e-10;132!UBERON:0001873;4.65e-09;2!UBERON:0001954;6.94e-09;2!UBERON:0003022;6.94e-09;2!UBERON:0002421;6.94e-09;2!UBERON:0002600;6.94e-09;2!UBERON:0002702;7.63e-09;2!UBERON:0001876;1.01e-08;2!UBERON:0001897;1.18e-08;2!UBERON:0010225;1.18e-08;2!UBERON:0002771;1.27e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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=2565
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=4086
|TSSclassifier=strong
|UniProt=F5H2S0,Q8N1C3
|association_with_transcript=0bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end
|coexpression_cluster_id=C3
|description=CAGE_peak_2_at_GABRG1_5end
|id=chr4:46126063..46126087,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0006601;1.49e-25;82!UBERON:0006215;1.25e-11;3!UBERON:0006241;3.23e-11;3!UBERON:0003057;3.23e-11;3!UBERON:0010122;4.65e-09;2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p2@GABRG1
}}

Revision as of 00:56, 22 January 2014

Short description:p2@GABRG1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_GABRG1_5end
Coexpression cluster:C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala
Association with transcript: 0bp_to_ENST00000540030, NM_173536, uc003gxb.2_5end
EntrezGene:GABRG1
HGNC: 4086
UniProt: F5H2S0Q8N1C3
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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