FFCP PHASE1:Hg19::chr4:86396521..86396541,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_ENST00000506421_5end | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_6_at_ARHGAP24_5end | |||
|id=chr4:86396521..86396541,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.44e-19!119;CL:0002057!1.58e-19!42;CL:0000738!1.09e-17!140;CL:0000860!6.46e-17!45;CL:0002031!1.56e-16!124;CL:0002009!1.57e-15!65;CL:0002194!1.12e-14!63;CL:0000576!1.12e-14!63;CL:0000040!1.12e-14!63;CL:0000559!1.12e-14!63;CL:0000945!5.05e-14!24;CL:0000826!5.05e-14!24;CL:0000557!1.51e-13!71;CL:0000766!2.05e-12!76;CL:0000839!2.83e-12!70;CL:0000037!1.27e-10!172;CL:0000566!1.27e-10!172;CL:0000236!2.82e-10!14;CL:0000988!4.51e-10!182;CL:0002032!5.95e-10!165;CL:0000837!5.95e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.31e-24;24!CL:0000236;2.01e-18;13!CL:0000473;4.12e-13;39!CL:0000234;4.12e-13;39!CL:0000860;1.51e-12;33!CL:0002057;1.51e-12;33!CL:0000576;1.97e-12;48!CL:0002087;2.34e-10;104!CL:0000766;1.73e-08;69!CL:0002393;1.94e-07;6!CL:0002397;1.94e-07;6!CL:0000738;2.46e-07;136!CL:0000542;5.67e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.01e-30,115;CL:0000738,1.51e-26,136;CL:0002031,5.13e-25,120;CL:0000945,4.07e-24,24;CL:0000826,4.07e-24,24;CL:0002009,5.72e-20,61;CL:0000236,8.78e-20,14;CL:0000473,9.99e-20,48;CL:0000234,9.99e-20,48;CL:0000988,1.03e-19,177;CL:0002194,1.77e-19,59;CL:0000576,1.77e-19,59;CL:0000040,1.77e-19,59;CL:0000559,1.77e-19,59;CL:0000037,8.76e-19,168;CL:0000860,2.90e-17,42;CL:0002057,2.90e-17,42;CL:0000557,3.10e-17,67;CL:0002032,1.06e-16,161;CL:0000837,1.06e-16,161;CL:0000839,2.48e-16,66;CL:0000766,3.97e-15,72;CL:0000542,2.35e-09,53;CL:0000051,2.35e-09,53;CL:0000838,1.13e-08,52;CL:0000763,2.66e-08,108;CL:0000049,2.66e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.49e-12;42!CL:0000051;5.67e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.33e-16!115;UBERON:0002193!7.65e-16!112;UBERON:0002390!5.97e-15!102;UBERON:0003061!5.97e-15!102;UBERON:0002371!9.22e-11!80;UBERON:0001474!1.19e-08!86;UBERON:0002405!2.12e-08!115;UBERON:0004765!2.04e-07!101;UBERON:0001434!2.04e-07!101;UBERON:0001049!4.08e-07!57;UBERON:0005068!4.08e-07!57;UBERON:0006241!4.08e-07!57;UBERON:0007135!4.08e-07!57;UBERON:0000479!6.75e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.43e-08;15!UBERON:0000179;3.43e-08;15!UBERON:0000463;3.43e-08;15!UBERON:0002298;3.69e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.50e-22,108;UBERON:0002390,1.60e-21,98;UBERON:0003061,1.60e-21,98;UBERON:0002405,3.23e-16,93;UBERON:0002371,5.59e-14,76;UBERON:0001474,3.14e-12,82;UBERON:0004765,2.73e-10,90;UBERON:0001434,2.38e-08,100;UBERON:0000178,3.15e-08,15;UBERON:0000179,3.15e-08,15;UBERON:0000463,3.15e-08,15;UBERON:0003081,8.18e-08,203;UBERON:0002298,1.24e-07,6 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,2.41077811209591,0,0.487932798790507,0,0,0,0,0,0,2.67446920117829,2.62721886239826,3.30585281517453,0,0.767658796194425,1.23852898652861,0,0,0.369754010166788,1.23947520928483,0.995184627411951,0,1.10799081706375,2.4065333696417,1.30206522429511,2.91090116511902,4.21061765824673,4.63636021741536,0.872389432677388,1.13362783106643,0.485168122375632,0.929716147622738,4.11167888021826,0.619412741790207,0.863077176966451,1.2808035326455,0.709446689665756,4.13694816883942,3.87290810150296,2.70852973188684,0.564727018627814,1.36453075028923,1.34834090667051,1.53041946185451,2.56743221660875,0.639337125799041,0.989553900560148,0.997318288108159,0.426224750532694,1.7412554317715,2.8369261234557,1.86846674698672,1.25624332628372,2.08593167368081,0.868755378820466,2.42159801053347,5.15588690382591,1.89877432464531,1.26753171787165,1.91343869968539,1.04829322754188,3.59451619668784,3.15371474967163,4.17886525412408,0.855038231223746,0.59675003159727,0.182664153764634,5.27988733383968,11.4689108365048,10.6741110463627,8.10787422876364,10.4102956629363,11.4950487990897,9.25462821898807,8.58648379081828,18.2148150115023,41.1066032559657,32.4932243906445,2.64342657158052,1.12101712596307,0,0,0,0,0,0.32592226663359,0,0,0,0,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0,0,1.34140171940727,0.255725123687061,0,0,0.289693037921647,0,0.486634870302636,0,0,0,0.523916301990851,0.364295288292542,0,0,0,0,2.62339686735876,0,7.4291500265913,0,0,0,0,0,0,0,1.03366703667732,1.06729878806013,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.794455084879313,0.860509862246441,0,0,1.06748995729705,0.24666754841716,0.311211035399766,1.0776853765575,0.817309515567294,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.896692083310806,0.23486899728753,0.647491777472526,0.842704840213491,0.816616685019573,0,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,6.25798129319264,0.643240938192885,0,0.928735856063958,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.651616610620649,0,0,0,0,0,0,0.190254152234598,0,0,2.95460407304877,1.17002132569619,1.63494278517601,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0,0.126995788584338,0,0,0,0,0,0.571652865261156,0,0,0,3.36106460970222,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0,0,0.325736184293735,0,0.791951872933429,0,0,0.299918973546171,0,2.51128545716063,0,0,0,0,0.579125226670317,0.61642896765115,1.79060963239896,0,0.394061520403854,0,0.385029108839245,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.736148950314839,0,0,0.623912584592421,0.713715955188647,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0,0.695068915744663,0,0,2.68798433959754,2.80428461064202,1.70764092485511,0.303127571446259,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0.462629081407967,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.676695028044854,0.154048617114644,0.767518373630648,1.7918754422989,3.00776685631166,1.88521702088497,1.53407929348982,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.571890581771475,0,0.42793898803392,0.318203247925937,0,1.43897966066652,1.09814811894422,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.430234056612155,0.196498082026242,0.35667105148125,0.709522128141196,0.211107635297664,0.658589785919804,0,0.349934720244983,0,0,0,1.22386941009813,0,0,0,0,1.52234282769651,0,0.569647187174163,2.1440859791201,3.70226045777575,0.648473311192717,1.08006287447623,0,0,0,0,2.04383492638291,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,2.06103206853459,0.307240764308458,0,0,0.390776190804081,0,0,0.811367035427949,0,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.984685914873589,3.00533503561846,0.494411622680279,0,0.996239941255349,4.14425873296722,0,0,2.58478091468246,0,0.808815160325942,0,0,1.87422470710174,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.964771509003264,0,0.442317039724898,0,0.658156191461918,0,0.41827123283581,0.538651809526579,0.113942055847001,0,0,0.108647371922008,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0.649165919226273,0,0.265372693510018,1.83309043480088,9.19215498909928,3.45979029050208,3.86361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| |||
|short_description=p6@ARHGAP24 | |||
}} |
Revision as of 02:03, 22 January 2014
Short description: | p6@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGAP24_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -54bp_to_ENST00000506421_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.01e-30 | 115 |
leukocyte | 1.51e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 5.13e-25 | 120 |
lymphocyte of B lineage | 4.07e-24 | 24 |
pro-B cell | 4.07e-24 | 24 |
macrophage dendritic cell progenitor | 5.72e-20 | 61 |
B cell | 8.78e-20 | 14 |
defensive cell | 9.99e-20 | 48 |
phagocyte | 9.99e-20 | 48 |
hematopoietic cell | 1.03e-19 | 177 |
monopoietic cell | 1.77e-19 | 59 |
monocyte | 1.77e-19 | 59 |
monoblast | 1.77e-19 | 59 |
promonocyte | 1.77e-19 | 59 |
hematopoietic stem cell | 8.76e-19 | 168 |
classical monocyte | 2.90e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.90e-17 | 42 |
granulocyte monocyte progenitor cell | 3.10e-17 | 67 |
hematopoietic oligopotent progenitor cell | 1.06e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-16 | 161 |
myeloid lineage restricted progenitor cell | 2.48e-16 | 66 |
myeloid leukocyte | 3.97e-15 | 72 |
lymphocyte | 2.35e-09 | 53 |
common lymphoid progenitor | 2.35e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 52 |
myeloid cell | 2.66e-08 | 108 |
common myeloid progenitor | 2.66e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.50e-22 | 108 |
hematopoietic system | 1.60e-21 | 98 |
blood island | 1.60e-21 | 98 |
immune system | 3.23e-16 | 93 |
bone marrow | 5.59e-14 | 76 |
bone element | 3.14e-12 | 82 |
skeletal element | 2.73e-10 | 90 |
skeletal system | 2.38e-08 | 100 |
blood | 3.15e-08 | 15 |
haemolymphatic fluid | 3.15e-08 | 15 |
organism substance | 3.15e-08 | 15 |
lateral plate mesoderm | 8.18e-08 | 203 |
brainstem | 1.24e-07 | 6 |