FFCP PHASE1:Hg19::chr5:133451294..133451310,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |||
|TSSclassifier=strong | |||
|UniProt=D4PHA3,E5RG34,P36402 | |||
|association_with_transcript=0bp_to_ENST00000378560,ENST00000432532,ENST00000520958,ENST00000522375,NM_001134851,NM_201632,NM_201634,NM_213648_5end | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_2_at_TCF7_5end | |||
|id=chr5:133451294..133451310,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-27!140;CL:0002087!5.78e-23!119;CL:0002031!2.39e-20!124;CL:0000838!6.79e-19!52;CL:0000084!2.63e-18!25;CL:0000827!2.63e-18!25;CL:0000542!2.77e-18!53;CL:0000051!2.77e-18!53;CL:0000037!4.04e-18!172;CL:0000566!4.04e-18!172;CL:0000791!5.58e-18!18;CL:0000789!5.58e-18!18;CL:0002420!5.58e-18!18;CL:0002419!5.58e-18!18;CL:0000790!5.58e-18!18;CL:0000988!9.64e-16!182;CL:0002032!5.96e-15!165;CL:0000837!5.96e-15!165;CL:0000625!3.21e-13!11;CL:0000624!7.59e-08!6;CL:0000766!1.03e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.42e-34;25!CL:0000791;2.57e-32;18!CL:0000789;2.57e-32;18!CL:0002419;2.57e-32;18!CL:0000625;5.07e-23;11!CL:0000624;4.02e-13;6!CL:0000542;2.28e-12;53!CL:0000226;1.67e-07;3!CL:0000842;1.67e-07;3!CL:0002087;2.14e-07;104!CL:0000898;4.39e-07;3!CL:0000623;5.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.56e-34,25;CL:0000827,3.56e-34,25;CL:0000791,2.58e-32,18;CL:0000789,2.58e-32,18;CL:0002420,2.58e-32,18;CL:0002419,2.58e-32,18;CL:0000790,2.58e-32,18;CL:0000738,3.07e-23,136;CL:0000625,5.14e-23,11;CL:0000838,9.83e-23,52;CL:0000542,3.79e-22,53;CL:0000051,3.79e-22,53;CL:0002087,2.24e-18,115;CL:0000037,3.20e-16,168;CL:0000988,1.00e-14,177;CL:0002031,1.14e-14,120;CL:0000624,3.99e-13,6;CL:0002032,6.17e-12,161;CL:0000837,6.17e-12,161;CL:0000226,1.67e-07,3;CL:0000842,1.67e-07,3;CL:0000898,4.39e-07,3;CL:0000623,5.17e-07,3;CL:0000825,5.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.57e-32;18!CL:0000051;2.28e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.82e-13!115;UBERON:0002390!4.31e-11!102;UBERON:0003061!4.31e-11!102;UBERON:0002193!2.94e-10!112;UBERON:0000178!4.80e-10!15;UBERON:0000179!4.80e-10!15;UBERON:0000463!4.80e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.26e-18;15!UBERON:0000179;2.26e-18;15!UBERON:0000463;2.26e-18;15!UBERON:0002390;3.06e-12;32!UBERON:0002193;1.67e-08;42!UBERON:0004177;2.27e-07;5!UBERON:0005057;2.27e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.23e-18,15;UBERON:0000179,2.23e-18,15;UBERON:0000463,2.23e-18,15;UBERON:0002193,3.03e-09,108;UBERON:0002390,3.99e-09,98;UBERON:0003061,3.99e-09,98;UBERON:0004177,7.31e-08,7;UBERON:0005057,7.31e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.229240217243854,0.410502947249729,0.472264687882075,7.47392126012918,4.22212337906934,3.71558695958582,0,0,0,0,0,0,8.86392653651004,10.0272223735071,12.8036413722353,0.447830948479849,8.09734165047449,0.515151135268373,0.145398238779565,1.51150377475524,0.727752183563449,0,1.23350366406548,0.309706370895104,0,0.512321413058201,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,1.28371610830437,1.91801137739712,0.989553900560148,0.398927315243264,0,0,1.70215567407342,1.86846674698672,0,1.0429658368404,0.217188844705117,0.605399502633369,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,1.70763890732835,1.76171156811282,1.91136614062614,1.32171328579026,1.12101712596307,0,152.253362068107,82.5322601773246,87.9974415717899,0.167186495390678,60.2956193272142,76.6985445290268,95.4650969198765,0.779873198196215,4.71369451959739,7.53215241584312,10.5613506868356,0.384273959177026,0.650296737799391,26.3100647365882,13.5411508715066,38.2540073170269,250.752578307044,238.646418656024,229.978152370949,1.0197840842781,83.9252880988208,84.8759790342096,125.750786933693,114.683549156675,69.6659295626368,61.7793828891443,116.846292404352,133.23406221175,104.941810303971,87.6075832562862,55.8367037906312,53.8290004410036,23.5347372289486,63.5779133045488,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.527008714158756,0.458426764241994,0,0,0,0.348259474598534,0,0.953962497221368,3.43196946468077,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77334191099179,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,346.548533040501,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,1.03664057770386,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.8002135607893,27.8159571568777,34.6526197955321,0,0,0,0,0,1.49801404789436,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.9403641210197,69.0285442619574,58.9136119075013,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0,0,0,0,0,36.028780255484,31.3501254928374,35.3181256047981,55.9844672325804,44.0157632202228,32.4236655596359,35.1020434204775,49.1737609302448,0,0,0,0,0,421.301996309308,10.5221340001023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,28.4572432997082,0,0,0.246169610922139,0,0.0898683511473268,0,0,3.25523238601881,28.7379710816328,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,149.202215365775,0,0,0,0.19606253431774,0,0,0,0,0,0,0,4.97630965539252,0.442287822516696,10.9985426088053,0,0,0,0.202203398942031,2.40773294189637,0,0,0,1.21390189767046,0,8.46935012340647,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.775912131907355,0,0,0,0.19871461170299,0,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,3.41753560563109,0,0.229160424011684,0,0.599037001496973,0.429226048136571,0.223171457441873,0.873385142327441,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.394028536495991,1.04909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49502377594773,3.45849471219265,1.24271716604159,40.189447766768,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,1.86623178009892,0.383683113910955,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,1.19349733269765,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0,0,0,2.74128883428591,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,1.82631744101899,0,0,0.357382720883282,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0.121917924982269,0,0.205325613712494,0,0,0,0,0,0.11294608203896,0,0,0.308696632431779,0.874238242015829,0,0,0,0,0,0,0,7.61269735636814,24.1072501021179,0,0,0,0,2.19100916473955,7.33966853447265,0.143339583151451,0,0,0,8.46442944824641,0,0,0,0,0.218531143927391,0,0,0.26721740526556,0,0.250707539292375,0.378893491091197,0.803892390468535,0,0,2.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| |||
|short_description=p2@TCF7 | |||
}} |
Revision as of 07:25, 22 January 2014
Short description: | p2@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCF7_5end |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | 0bp_to_ENST00000378560, ENST00000432532, ENST00000520958, ENST00000522375, NM_001134851, NM_201632, NM_201634, NM_213648_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | D4PHA3E5RG34P36402 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.56e-34 | 25 |
pro-T cell | 3.56e-34 | 25 |
mature alpha-beta T cell | 2.58e-32 | 18 |
alpha-beta T cell | 2.58e-32 | 18 |
immature T cell | 2.58e-32 | 18 |
mature T cell | 2.58e-32 | 18 |
immature alpha-beta T cell | 2.58e-32 | 18 |
leukocyte | 3.07e-23 | 136 |
CD8-positive, alpha-beta T cell | 5.14e-23 | 11 |
lymphoid lineage restricted progenitor cell | 9.83e-23 | 52 |
lymphocyte | 3.79e-22 | 53 |
common lymphoid progenitor | 3.79e-22 | 53 |
nongranular leukocyte | 2.24e-18 | 115 |
hematopoietic stem cell | 3.20e-16 | 168 |
hematopoietic cell | 1.00e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 1.14e-14 | 120 |
CD4-positive, alpha-beta T cell | 3.99e-13 | 6 |
hematopoietic oligopotent progenitor cell | 6.17e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.17e-12 | 161 |
single nucleate cell | 1.67e-07 | 3 |
mononuclear cell | 1.67e-07 | 3 |
naive T cell | 4.39e-07 | 3 |
natural killer cell | 5.17e-07 | 3 |
pro-NK cell | 5.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.23e-18 | 15 |
haemolymphatic fluid | 2.23e-18 | 15 |
organism substance | 2.23e-18 | 15 |
hemolymphoid system | 3.03e-09 | 108 |
hematopoietic system | 3.99e-09 | 98 |
blood island | 3.99e-09 | 98 |
hemopoietic organ | 7.31e-08 | 7 |
immune organ | 7.31e-08 | 7 |