FFCP PHASE1:Hg19::chr6:113953725..113953744,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000452675_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_ENST00000452675_5end | |||
|id=chr6:113953725..113953744,- | |||
|ontology_enrichment_celltype=CL:0002057!2.96e-24!42;CL:0000860!3.05e-22!45;CL:0002009!2.31e-17!65;CL:0002194!3.74e-16!63;CL:0000576!3.74e-16!63;CL:0000040!3.74e-16!63;CL:0000559!3.74e-16!63;CL:0000766!1.54e-14!76;CL:0000557!2.62e-14!71;CL:0000839!2.00e-13!70;CL:0000738!2.79e-13!140;CL:0002087!4.48e-13!119;CL:0002031!5.23e-11!124;CL:0000988!2.73e-07!182;CL:0000763!4.16e-07!112;CL:0000049!4.16e-07!112;CL:0000063!7.48e-07!578;CL:0000037!7.90e-07!172;CL:0000566!7.90e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.02e-21;33!CL:0002057;8.02e-21;33!CL:0000473;2.46e-15;39!CL:0000234;2.46e-15;39!CL:0000576;3.61e-15;48!CL:0000766;1.18e-10;69!CL:0002087;3.37e-09;104!CL:0002393;1.17e-08;6!CL:0002397;1.17e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.25e-31,42;CL:0002057,9.25e-31,42;CL:0000473,5.86e-28,48;CL:0000234,5.86e-28,48;CL:0002009,1.89e-21,61;CL:0002194,1.39e-20,59;CL:0000576,1.39e-20,59;CL:0000040,1.39e-20,59;CL:0000559,1.39e-20,59;CL:0000557,9.24e-19,67;CL:0002087,1.19e-18,115;CL:0000766,5.74e-18,72;CL:0000839,1.58e-17,66;CL:0000738,5.68e-17,136;CL:0002031,1.64e-16,120;CL:0000988,1.21e-12,177;CL:0000037,1.80e-11,168;CL:0002032,5.82e-11,161;CL:0000837,5.82e-11,161;CL:0000763,3.78e-10,108;CL:0000049,3.78e-10,108;CL:0002393,6.45e-10,9;CL:0002397,6.45e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-22;42 | |||
|ontology_enrichment_disease=DOID:1749!5.27e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.61e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.38e-12!102;UBERON:0003061!3.38e-12!102;UBERON:0002193!5.13e-12!112;UBERON:0002371!2.49e-11!80;UBERON:0001474!7.21e-10!86;UBERON:0002405!1.73e-09!115;UBERON:0004765!8.80e-08!101;UBERON:0001434!8.80e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;4.45e-12;6!UBERON:0003343;7.65e-09;4!UBERON:0004785;7.65e-09;4!UBERON:0001723;4.43e-07;3!UBERON:0001033;4.43e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.13e-19,98;UBERON:0003061,6.13e-19,98;UBERON:0002193,3.38e-16,108;UBERON:0002371,1.54e-15,76;UBERON:0002405,2.30e-14,93;UBERON:0001474,8.50e-14,82;UBERON:0000974,7.11e-12,10;UBERON:0004765,7.50e-12,90;UBERON:0001434,6.97e-10,100;UBERON:0003343,6.77e-09,4;UBERON:0004785,6.77e-09,4;UBERON:0001723,4.79e-07,3;UBERON:0001033,4.79e-07,3;UBERON:0010056,4.79e-07,3 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,7.79416738629103,7.88165658719479,7.00525953691745,0.786728553697808,1.15148819429164,2.16742572642506,0,0.30120591877825,0.369754010166788,0,1.13735385989937,0,4.43196326825502,4.01088894940283,3.68918480216948,0,0,0.257575567634187,0.290796477559129,0,0.727752183563449,0.464858073811369,0.411167888021826,1.54853185447552,2.8769239232215,2.0492856522328,3.31075121844019,3.7922024881028,5.16387746867061,9.47985406160392,1.50593871634084,1.63743690034707,2.02251136000576,3.97909060082173,4.17207735198922,7.03270838378945,0.659702600373432,0.598390972864896,1.27867425159808,8.9964863974861,6.80862269629368,6.85104473895132,0.75374599577023,0.521482918420201,1.95469960234605,13.3187890579341,7.36555271975129,13.2914202725171,0,2.97646019951061,2.09658645508376,0.336985893439485,0.300353785683013,0.32145117339416,1.14005097496499,0.39783335439818,1.27864907635244,0,0,0,0,0,0,0,0,0.569212969109448,1.76171156811282,0.382273228125229,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0.476981248610684,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,1.06778694409284,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.736399189138395,0,0,0.403008392910561,0,0.386521706326594,0.818238361772504,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,1.35287282397425,0,0.768251997860379,2.24803506515239,0.100528972411631,0.370353780634118,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0.671928512795438,0,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,2.43247561282381,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0.394061520403854,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0,0.0868836144680828,0,0,0.413536052245775,1.94142780736755,1.49418580924822,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.896974044789907,1.02341449813341,0.482561763430822,0,0,0,0,0,0.116210378459959,0.725156697549733,1.00253235151642,1.01289087829486,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0,0.247528499761764,0,2.60024098414608,0,0,0,0,0,0.107420244868274,0,0,0.534192213880424,0.330569830721956,0.576570202095319,0.765676274967505,0.50578890427775,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.689170200620878,0.507447609232169,0,0,0,0,0,0,0,0,0,7.10616626344992,0.557409525377156,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0.242721043499027,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0,4.4310529965985,0.622079175323615,0.0898683511473268,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,3.34616986268648,0.153900517007594,0.455768223388005,0,0,0,0.638002319463839,0.274792780205587,1.06606955203727,0,0,0,0,0,0,0,0,1.68798451622422,0.489698424477443,0.282706142867882,0,0,0.176915129006678,0,9.78519724646052,1.72989514525104,3.23708043466912,0.067401132980677,2.40773294189637,0,0,1.9566461893209,0,0,0,0,0.063186579628488,1.05226393590145,0.103688191397247,0.664653872707185,0,0,0,0,0.138674673013139,0,1.37189356380129,2.00236175134926,0.873633341210151,0,0,0.0730893170861856,0,0.387956065953678,0,0.225980740780532,0.274083849293502,0,0,4.88878456837007,0.240476460754601,0,6.99333633537456,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,1.31443677139657,3.90995361781156,0,0,0,0,0.223171457441873,0.671834724867263,0.360299883542404,0,0.0787831823072236,0.412079291905832,0.26961417541674,0.196854963029498,1.6087933092499,0,0,0,0,0,0.899895566206002,13.1546332274851,0,3.68978156359193,0,0,0.105600336519406,0,0.383830394638891,25.0143364230678,0.662091970365432,0,0,0,0,0,0,2.3854323049959,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,2.81926008926669,1.17466153824464,0.314408610199332,0.828478110694391,0.496166021811951,0,0.365377795142688,5.74507131993164,1.63205341010842,0.7520696820681,0.612691153526923,1.96723578425883,0.314108192500469,0,0,0,0,0,0,0,0.624902039810533,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0,0,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0.363697318405119,0.429642228169954,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.694567422971502,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0.654261577023377,1.96565909307848,0.491545817507439,0,1.9998739585493,0,0.344429959321631,0,0.184105950251841,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3480897161395,2.47736419030255,2.93485757634686,3.23471865220947,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,3.96968942711435,0,6.00483409906098,0,0,0,0,0,1.38280785066935,0.514464028312255,0,0,0,0,1.17739639275771,0,0.840816489941367,0,1.94334832096759,0,0,0,0,0,0,0.828864656652147,0.51215543128185,1.38251932362818,0.430227358820278,0,0.255640214277473,1.27016115057279,0.22910686854405,0,0,0.111855431797792,0,0,0,8.5210129690685,0,1.45713297917742,0,0,0,0,0,0.301925687133347,0,0.437119121007915,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0.0644578879735772,7.19576322659488,9.46335874609985,1.05868461514708,1.92579280054004,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,4.69114760182158,1.66645102024618,1.35636710655613,2.48298857183432,0,0.12729431655633,0.404234377916439,7.83780292429061,2.39563310759697,0.740872583160463,3.29922144806311,1.66330178273007,2.52350132694021,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.603821380773079,1.9234109538194 | |||
|short_description=p1@ENST00000452675 | |||
}} |
Revision as of 13:28, 22 January 2014
Short description: | p1@ENST00000452675 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000452675_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -9bp_to_ENST00000452675_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.25e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.25e-31 | 42 |
defensive cell | 5.86e-28 | 48 |
phagocyte | 5.86e-28 | 48 |
macrophage dendritic cell progenitor | 1.89e-21 | 61 |
monopoietic cell | 1.39e-20 | 59 |
monocyte | 1.39e-20 | 59 |
monoblast | 1.39e-20 | 59 |
promonocyte | 1.39e-20 | 59 |
granulocyte monocyte progenitor cell | 9.24e-19 | 67 |
nongranular leukocyte | 1.19e-18 | 115 |
myeloid leukocyte | 5.74e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.58e-17 | 66 |
leukocyte | 5.68e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.64e-16 | 120 |
hematopoietic cell | 1.21e-12 | 177 |
hematopoietic stem cell | 1.80e-11 | 168 |
hematopoietic oligopotent progenitor cell | 5.82e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.82e-11 | 161 |
myeloid cell | 3.78e-10 | 108 |
common myeloid progenitor | 3.78e-10 | 108 |
intermediate monocyte | 6.45e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.45e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.13e-19 | 98 |
blood island | 6.13e-19 | 98 |
hemolymphoid system | 3.38e-16 | 108 |
bone marrow | 1.54e-15 | 76 |
immune system | 2.30e-14 | 93 |
bone element | 8.50e-14 | 82 |
neck | 7.11e-12 | 10 |
skeletal element | 7.50e-12 | 90 |
skeletal system | 6.97e-10 | 100 |
mucosa of oral region | 6.77e-09 | 4 |
respiratory system mucosa | 6.77e-09 | 4 |
tongue | 4.79e-07 | 3 |
gustatory system | 4.79e-07 | 3 |
future tongue | 4.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-15 | 14 |