FFCP PHASE1:Hg19::chr9:130524481..130524502,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10044 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16884 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000464239_5end | |||
|coexpression_cluster_id=C2448 | |||
|description=CAGE_peak_7_at_SH2D3C_5end | |||
|id=chr9:130524481..130524502,- | |||
|ontology_enrichment_celltype=CL:0000115!2.67e-21!35;CL:0002139!2.75e-21!24;CL:0000071!9.37e-20!18;CL:0002546!9.37e-20!18;CL:0002078!2.93e-15!44;CL:0000213!4.80e-10!57;CL:0000215!4.80e-10!57;CL:1000413!2.41e-09!9;CL:0002543!1.24e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.12e-15;36!CL:0000071;6.60e-13;18!CL:0002139;1.80e-11;24!CL:0002543;1.02e-08;6!CL:0002262;6.61e-08;2!CL:1000398;6.61e-08;2!CL:0002078;1.19e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.84e-17,36;CL:0000071,6.75e-13,18;CL:0002546,6.75e-13,18;CL:0002078,1.10e-12,45;CL:0002139,1.92e-11,24;CL:0000213,4.34e-09,58;CL:0000215,4.34e-09,58;CL:0002543,1.26e-08,6;CL:0002262,6.20e-08,2;CL:1000398,6.20e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002546;6.60e-13;18!UBERON:0004872;1.55e-12;7!UBERON:0005062;4.82e-09;4!UBERON:0007284;4.82e-09;4!UBERON:0006603;4.26e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.41e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.42e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.56e-78!115;UBERON:0004111!1.08e-25!241;UBERON:0000025!3.19e-24!194;UBERON:0000477!1.04e-23!286;UBERON:0001049!1.73e-22!57;UBERON:0005068!1.73e-22!57;UBERON:0006241!1.73e-22!57;UBERON:0007135!1.73e-22!57;UBERON:0001986!9.37e-20!18;UBERON:0004638!9.37e-20!18;UBERON:0004852!9.37e-20!18;UBERON:0002616!1.07e-18!59;UBERON:0003080!6.74e-18!42;UBERON:0003075!1.09e-17!86;UBERON:0007284!1.09e-17!86;UBERON:0002780!5.40e-17!41;UBERON:0001890!5.40e-17!41;UBERON:0006240!5.40e-17!41;UBERON:0002346!2.38e-16!90;UBERON:0002020!5.67e-16!34;UBERON:0003528!5.67e-16!34;UBERON:0001017!7.35e-16!82;UBERON:0005743!9.67e-16!86;UBERON:0001893!1.46e-15!34;UBERON:0000487!3.31e-15!22;UBERON:0000955!3.55e-15!69;UBERON:0006238!3.55e-15!69;UBERON:0002791!8.23e-15!33;UBERON:0000073!3.58e-14!94;UBERON:0001016!3.58e-14!94;UBERON:0001869!4.95e-14!32;UBERON:0000483!7.51e-14!309;UBERON:0000119!1.72e-13!312;UBERON:0006914!9.00e-13!25;UBERON:0003056!5.20e-11!61;UBERON:0000468!5.23e-11!659;UBERON:0000153!9.31e-11!129;UBERON:0007811!9.31e-11!129;UBERON:0004872!9.44e-11!84;UBERON:0002308!1.46e-10!9;UBERON:0000125!1.46e-10!9;UBERON:0002420!2.73e-10!9;UBERON:0007245!2.73e-10!9;UBERON:0010009!2.73e-10!9;UBERON:0010011!2.73e-10!9;UBERON:0000454!2.73e-10!9;UBERON:0002619!4.61e-10!22;UBERON:0000467!5.09e-10!625;UBERON:0000480!5.99e-10!626;UBERON:0001950!7.21e-10!20;UBERON:0000055!7.89e-10!69;UBERON:0002298!1.15e-09!8;UBERON:0003915!2.41e-09!9;UBERON:0004700!2.41e-09!9;UBERON:0001917!2.41e-09!9;UBERON:0000033!3.68e-09!123;UBERON:0001981!1.02e-08!60;UBERON:0007500!1.02e-08!60;UBERON:0004537!1.02e-08!60;UBERON:0006965!1.02e-08!60;UBERON:0000922!1.14e-08!612;UBERON:0000956!1.89e-08!25;UBERON:0000203!1.89e-08!25;UBERON:0000064!3.10e-08!219;UBERON:0009663!3.30e-08!7;UBERON:0004121!3.40e-08!169;UBERON:0001009!4.76e-08!113;UBERON:0002050!9.37e-08!605;UBERON:0005423!9.37e-08!605;UBERON:0000924!1.00e-07!173;UBERON:0006601!1.00e-07!173;UBERON:0003914!1.14e-07!118;UBERON:0002049!1.32e-07!79;UBERON:0007798!1.32e-07!79;UBERON:0001638!1.50e-07!9;UBERON:0003920!1.50e-07!9;UBERON:0004582!1.50e-07!9;UBERON:0000923!2.05e-07!604;UBERON:0005291!2.05e-07!604;UBERON:0006598!2.05e-07!604;UBERON:0002532!2.05e-07!604;UBERON:0003103!2.13e-07!69;UBERON:0000481!2.27e-07!347;UBERON:0000200!5.94e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.60e-13;18!UBERON:0001986;6.60e-13;18!UBERON:0004852;6.60e-13;18!UBERON:0003978;6.12e-12;3!UBERON:0000946;6.12e-12;3!UBERON:0000487;2.90e-10;22!UBERON:0001638;6.56e-09;9!UBERON:0003920;6.56e-09;9!UBERON:0004582;6.56e-09;9!UBERON:0006914;7.69e-09;25!UBERON:0002133;1.54e-08;2!UBERON:0007100;4.17e-08;25!UBERON:0001281;6.61e-08;2!UBERON:0003497;6.61e-08;2!UBERON:0003909;6.61e-08;2!UBERON:0003835;6.61e-08;2!UBERON:0005090;2.37e-07;2!UBERON:0001630;2.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.30e-21,114;UBERON:0004638,6.75e-13,18;UBERON:0001986,6.75e-13,18;UBERON:0004852,6.75e-13,18;UBERON:0003978,6.39e-12,3;UBERON:0009751,6.39e-12,3;UBERON:0000946,6.39e-12,3;UBERON:0002523,6.39e-12,3;UBERON:0005983,6.39e-12,3;UBERON:0002165,6.39e-12,3;UBERON:0002062,6.39e-12,3;UBERON:0007280,6.39e-12,3;UBERON:0004872,2.17e-11,83;UBERON:0000487,2.95e-10,22;UBERON:0007500,2.68e-09,59;UBERON:0001981,2.68e-09,59;UBERON:0004537,2.68e-09,59;UBERON:0006965,2.68e-09,59;UBERON:0001638,7.51e-09,9;UBERON:0003920,7.51e-09,9;UBERON:0004582,7.51e-09,9;UBERON:0006914,7.81e-09,25;UBERON:0000055,8.66e-09,68;UBERON:0002133,1.63e-08,2;UBERON:0001009,3.37e-08,112;UBERON:0003103,5.48e-08,68;UBERON:0001281,6.20e-08,2;UBERON:0003497,6.20e-08,2;UBERON:0003909,6.20e-08,2;UBERON:0003835,6.20e-08,2;UBERON:0005090,1.03e-07,2;UBERON:0001630,1.03e-07,2;UBERON:0004111,1.05e-07,240;UBERON:0003914,1.90e-07,117;UBERON:0007100,2.14e-07,27;UBERON:0002049,3.28e-07,78;UBERON:0007798,3.28e-07,78;UBERON:0003887,8.62e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0.39752481473341,0,2.77712401286075,0.56530794192401,0.838998872419812,1.92582629358047,1.04497483268405,1.29208379584664,0.71153252537342,0,1.20848795132744,0.760272105718513,0.976248230192678,0.367663080345869,1.62028389576352,1.3394959242612,1.12264686313085,0.225222960966644,1.53316637465883,0.949265659568129,1.28241220751285,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64339909162183,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,1.19065593693561,0.215915916102139,4.62681758070868,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0.371072392647405,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.482385754501632,1.52581736317083,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.619202951523374,0.611030144933625,0,0,0,0.539209063845416,1.60515529459758,0,0,0,0,1.18375320854817,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,1.35784623083787,0,1.58186518546373,0,0,0.379864775735272,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,6.14421282798959,6.64565229633883,8.61447629492177,3.19486400798386,6.86761677018513,5.35611497860494,4.77002654655756,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.668245123238271,0,1.49730843868477,0.996637174564964,0,0,0,0.714695326373367,5.29673576292345,0,0,0,0,0,0,0,0,0.58620893471233,0,1.29282956361551,0.79339561045614,0,0,7.04796922946785,9.58946261107962,16.1553231585406,0.992332043623902,0,0,0,1.08803560673895,3.0082787282724,0.306345576763462,0,0,0.886068179966986,0.610131324509816,0.1251909307065,0.573409195690071,0.332787154610557,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.252071696221718,0.553258019713743,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,1.5794168953344,0,0.781514011233092,0,0,0,0.270150338473579,0,0,0.634158101939068,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0,0.606965604236632,0.682986574053893,2.39496399439125,0,0,0.747667062745149,0.328863867814245,0,0,1.02041020705668,0.785577949580009,0,0,0,0,2.07281978112303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,1.84793052341245,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.848915739187391,0,0,0.245148321753905,0,0.785233868459781,0.297046400327086,0,0,2.53756578545605,2.57831551894309,0,0,0,0,0.730336388246517,1.37618785021362,0.143339583151451,0,0.543931921527318,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0.20686599172379,1.91910583710883,0.952257725854961,0.0645889098360061,0.186224142887574,0,0.891060215894309,1.0105859447911,3.26575121845442,2.05339980651169,0.404112318087525,0.932388670104793,0,0,0,0,0,2.34640942403454,2.07810455110873,0.406896178315738,0.665756774185513,3.8242020782295,0 | |||
|short_description=p7@SH2D3C | |||
}} |
Revision as of 03:24, 23 January 2014
Short description: | p7@SH2D3C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SH2D3C_5end |
Coexpression cluster: | C2448_lung_heart_adipose_uterus_spleen_penis_diaphragm |
Association with transcript: | -14bp_to_ENST00000464239_5end |
EntrezGene: | SH2D3C |
HGNC: | 16884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.84e-17 | 36 |
blood vessel endothelial cell | 6.75e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.75e-13 | 18 |
meso-epithelial cell | 1.10e-12 | 45 |
endothelial cell of vascular tree | 1.92e-11 | 24 |
lining cell | 4.34e-09 | 58 |
barrier cell | 4.34e-09 | 58 |
vein endothelial cell | 1.26e-08 | 6 |
endothelial cell of sinusoid | 6.20e-08 | 2 |
endothelial cell of hepatic sinusoid | 6.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.42e-08 | 2 |