FFCP PHASE1:Hg19::chr10:104176135..104176160,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104176135..104176160,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_at_chr10:104176135..104176160,+ | |description=CAGE_peak_at_chr10:104176135..104176160,+ | ||
|id=chr10:104176135..104176160,+ | |id=chr10:104176135..104176160,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.08e-29!2;UBERON:0002757!1.08e-29!2;UBERON:0010134!1.08e-29!2;UBERON:0002784!1.08e-29!2;UBERON:0005408!1.08e-29!2;UBERON:0001899!1.08e-29!2;UBERON:0000966!2.79e-26!5;UBERON:0005388!2.79e-26!5;UBERON:0001802!2.79e-26!5;UBERON:0003296!2.22e-15!4;UBERON:0010133!2.22e-15!4;UBERON:0002581!3.66e-15!1;UBERON:0005743!4.30e-15!86;UBERON:0003056!5.84e-14!61;UBERON:0000073!1.34e-13!94;UBERON:0001016!1.34e-13!94;UBERON:0003075!2.58e-12!86;UBERON:0007284!2.58e-12!86;UBERON:0002021!2.99e-12!5;UBERON:0000955!4.84e-12!69;UBERON:0006238!4.84e-12!69;UBERON:0000970!8.78e-12!20;UBERON:0002346!9.81e-12!90;UBERON:0002104!3.10e-11!21;UBERON:0000033!2.58e-10!123;UBERON:0000020!2.79e-10!23;UBERON:0001017!4.56e-10!82;UBERON:0001032!7.31e-10!24;UBERON:0004456!7.31e-10!24;UBERON:0000153!8.59e-10!129;UBERON:0007811!8.59e-10!129;UBERON:0001894!3.44e-09!7;UBERON:0006222!3.44e-09!7;UBERON:0001049!1.67e-08!57;UBERON:0005068!1.67e-08!57;UBERON:0006241!1.67e-08!57;UBERON:0007135!1.67e-08!57;UBERON:0002780!1.99e-08!41;UBERON:0001890!1.99e-08!41;UBERON:0006240!1.99e-08!41;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2;UBERON:0003080!3.14e-08!42;UBERON:0002616!3.29e-08!59;UBERON:0000019!2.32e-07!19;UBERON:0000047!2.32e-07!19;UBERON:0004088!2.32e-07!19;UBERON:0003072!2.32e-07!19;UBERON:0003071!2.32e-07!19;UBERON:0004128!2.32e-07!19;UBERON:0004121!3.45e-07!169;UBERON:0000924!5.34e-07!173;UBERON:0006601!5.34e-07!173 | |ontology_enrichment_uberon=UBERON:0001905!1.08e-29!2;UBERON:0002757!1.08e-29!2;UBERON:0010134!1.08e-29!2;UBERON:0002784!1.08e-29!2;UBERON:0005408!1.08e-29!2;UBERON:0001899!1.08e-29!2;UBERON:0000966!2.79e-26!5;UBERON:0005388!2.79e-26!5;UBERON:0001802!2.79e-26!5;UBERON:0003296!2.22e-15!4;UBERON:0010133!2.22e-15!4;UBERON:0002581!3.66e-15!1;UBERON:0005743!4.30e-15!86;UBERON:0003056!5.84e-14!61;UBERON:0000073!1.34e-13!94;UBERON:0001016!1.34e-13!94;UBERON:0003075!2.58e-12!86;UBERON:0007284!2.58e-12!86;UBERON:0002021!2.99e-12!5;UBERON:0000955!4.84e-12!69;UBERON:0006238!4.84e-12!69;UBERON:0000970!8.78e-12!20;UBERON:0002346!9.81e-12!90;UBERON:0002104!3.10e-11!21;UBERON:0000033!2.58e-10!123;UBERON:0000020!2.79e-10!23;UBERON:0001017!4.56e-10!82;UBERON:0001032!7.31e-10!24;UBERON:0004456!7.31e-10!24;UBERON:0000153!8.59e-10!129;UBERON:0007811!8.59e-10!129;UBERON:0001894!3.44e-09!7;UBERON:0006222!3.44e-09!7;UBERON:0001049!1.67e-08!57;UBERON:0005068!1.67e-08!57;UBERON:0006241!1.67e-08!57;UBERON:0007135!1.67e-08!57;UBERON:0002780!1.99e-08!41;UBERON:0001890!1.99e-08!41;UBERON:0006240!1.99e-08!41;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2;UBERON:0003080!3.14e-08!42;UBERON:0002616!3.29e-08!59;UBERON:0000019!2.32e-07!19;UBERON:0000047!2.32e-07!19;UBERON:0004088!2.32e-07!19;UBERON:0003072!2.32e-07!19;UBERON:0003071!2.32e-07!19;UBERON:0004128!2.32e-07!19;UBERON:0004121!3.45e-07!169;UBERON:0000924!5.34e-07!173;UBERON:0006601!5.34e-07!173 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0000970,1.02e-13,21;UBERON:0002104,1.02e-13,21;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0000020,3.75e-12,24;UBERON:0001032,3.75e-12,24;UBERON:0004456,3.75e-12,24;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p@chr10:104176135..104176160,+ | |short_description=p@chr10:104176135..104176160,+ | ||
}} | }} |
Latest revision as of 09:47, 23 July 2015
Short description: | p@chr10:104176135..104176160, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104176135..104176160, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
eye | 1.02e-13 | 21 |
visual system | 1.02e-13 | 21 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
sense organ | 3.75e-12 | 24 |
sensory system | 3.75e-12 | 24 |
entire sense organ system | 3.75e-12 | 24 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |