FFCP PHASE1:Hg19::chr10:104402942..104402947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104402942..104402947,- | |||
|description=CAGE_peak_at_chr10:104402942..104402947,- | |description=CAGE_peak_at_chr10:104402942..104402947,- | ||
|id=chr10:104402942..104402947,- | |id=chr10:104402942..104402947,- | ||
|ontology_enrichment_celltype=CL:0002057!2.15e-10!42;CL:0000860!1.91e-09!45;CL:0000048!3.87e-08!430;CL:0000183!1.87e-07!59;CL:0000055!2.41e-07!180;CL:0000557!3.50e-07!71;CL:0000723!4.46e-07!436;CL:0002009!5.64e-07!65;CL:0000680!8.10e-07!57;CL:0000056!8.10e-07!57;CL:0000355!8.10e-07!57 | |ontology_enrichment_celltype=CL:0002057!2.15e-10!42;CL:0000860!1.91e-09!45;CL:0000048!3.87e-08!430;CL:0000183!1.87e-07!59;CL:0000055!2.41e-07!180;CL:0000557!3.50e-07!71;CL:0000723!4.46e-07!436;CL:0002009!5.64e-07!65;CL:0000680!8.10e-07!57;CL:0000056!8.10e-07!57;CL:0000355!8.10e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-08;32!CL:0000136;5.78e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.89e-10,42;CL:0002057,3.89e-10,42;CL:0000473,1.35e-09,48;CL:0000234,1.35e-09,48;CL:0000359,2.02e-09,32;CL:0000192,5.80e-08,43;CL:0000514,5.80e-08,43;CL:0000680,1.14e-07,58;CL:0000056,1.14e-07,58;CL:0000355,1.14e-07,58;CL:0000048,1.17e-07,427;CL:0000766,1.68e-07,72;CL:0000557,2.30e-07,67;CL:0000187,3.65e-07,55;CL:0000723,4.25e-07,433;CL:0000034,5.21e-07,441;CL:0000839,6.41e-07,66;CL:0000136,7.04e-07,15;CL:0000393,7.07e-07,61;CL:0000211,7.07e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.16e-13!216;UBERON:0002204!2.98e-11!167;UBERON:0004872!4.46e-11!84;UBERON:0001637!8.08e-11!42;UBERON:0003509!8.08e-11!42;UBERON:0004572!8.08e-11!42;UBERON:0001981!6.28e-10!60;UBERON:0007500!6.28e-10!60;UBERON:0004537!6.28e-10!60;UBERON:0006965!6.28e-10!60;UBERON:0000055!1.44e-09!69;UBERON:0004573!1.29e-08!33;UBERON:0004571!1.29e-08!33;UBERON:0004535!1.79e-08!110;UBERON:0000468!1.86e-08!659;UBERON:0000467!5.00e-08!625;UBERON:0002049!6.06e-08!79;UBERON:0007798!6.06e-08!79;UBERON:0001009!6.31e-08!113;UBERON:0000480!7.95e-08!626;UBERON:0002371!3.44e-07!80;UBERON:0001474!4.45e-07!86 | |ontology_enrichment_uberon=UBERON:0003081!4.16e-13!216;UBERON:0002204!2.98e-11!167;UBERON:0004872!4.46e-11!84;UBERON:0001637!8.08e-11!42;UBERON:0003509!8.08e-11!42;UBERON:0004572!8.08e-11!42;UBERON:0001981!6.28e-10!60;UBERON:0007500!6.28e-10!60;UBERON:0004537!6.28e-10!60;UBERON:0006965!6.28e-10!60;UBERON:0000055!1.44e-09!69;UBERON:0004573!1.29e-08!33;UBERON:0004571!1.29e-08!33;UBERON:0004535!1.79e-08!110;UBERON:0000468!1.86e-08!659;UBERON:0000467!5.00e-08!625;UBERON:0002049!6.06e-08!79;UBERON:0007798!6.06e-08!79;UBERON:0001009!6.31e-08!113;UBERON:0000480!7.95e-08!626;UBERON:0002371!3.44e-07!80;UBERON:0001474!4.45e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.29e-10;42!UBERON:0003509;9.29e-10;42!UBERON:0004572;9.29e-10;42!UBERON:0004573;1.22e-09;33!UBERON:0004571;1.22e-09;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,8.08e-16,203;UBERON:0000926,6.43e-13,315;UBERON:0004120,6.43e-13,315;UBERON:0006603,6.43e-13,315;UBERON:0004872,1.52e-12,83;UBERON:0001637,1.76e-12,42;UBERON:0003509,1.76e-12,42;UBERON:0004572,1.76e-12,42;UBERON:0002204,6.33e-12,167;UBERON:0007500,3.23e-11,59;UBERON:0001981,3.23e-11,59;UBERON:0004537,3.23e-11,59;UBERON:0006965,3.23e-11,59;UBERON:0004573,8.60e-11,33;UBERON:0004571,8.60e-11,33;UBERON:0000055,9.56e-10,68;UBERON:0003914,2.28e-07,117;UBERON:0002371,3.08e-07,76;UBERON:0002049,4.26e-07,78;UBERON:0007798,4.26e-07,78;UBERON:0001474,4.48e-07,82;UBERON:0004535,6.06e-07,109 | |||
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| ||
|short_description=p@chr10:104402942..104402947,- | |short_description=p@chr10:104402942..104402947,- | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104402942..104402947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104402942..104402947, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.89e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.89e-10 | 42 |
defensive cell | 1.35e-09 | 48 |
phagocyte | 1.35e-09 | 48 |
vascular associated smooth muscle cell | 2.02e-09 | 32 |
smooth muscle cell | 5.80e-08 | 43 |
smooth muscle myoblast | 5.80e-08 | 43 |
muscle precursor cell | 1.14e-07 | 58 |
myoblast | 1.14e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-07 | 58 |
multi fate stem cell | 1.17e-07 | 427 |
myeloid leukocyte | 1.68e-07 | 72 |
granulocyte monocyte progenitor cell | 2.30e-07 | 67 |
muscle cell | 3.65e-07 | 55 |
somatic stem cell | 4.25e-07 | 433 |
stem cell | 5.21e-07 | 441 |
myeloid lineage restricted progenitor cell | 6.41e-07 | 66 |
fat cell | 7.04e-07 | 15 |
electrically responsive cell | 7.07e-07 | 61 |
electrically active cell | 7.07e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 8.08e-16 | 203 |
mesoderm | 6.43e-13 | 315 |
mesoderm-derived structure | 6.43e-13 | 315 |
presumptive mesoderm | 6.43e-13 | 315 |
splanchnic layer of lateral plate mesoderm | 1.52e-12 | 83 |
artery | 1.76e-12 | 42 |
arterial blood vessel | 1.76e-12 | 42 |
arterial system | 1.76e-12 | 42 |
musculoskeletal system | 6.33e-12 | 167 |
epithelial tube open at both ends | 3.23e-11 | 59 |
blood vessel | 3.23e-11 | 59 |
blood vasculature | 3.23e-11 | 59 |
vascular cord | 3.23e-11 | 59 |
systemic artery | 8.60e-11 | 33 |
systemic arterial system | 8.60e-11 | 33 |
vessel | 9.56e-10 | 68 |
epithelial tube | 2.28e-07 | 117 |
bone marrow | 3.08e-07 | 76 |
vasculature | 4.26e-07 | 78 |
vascular system | 4.26e-07 | 78 |
bone element | 4.48e-07 | 82 |
cardiovascular system | 6.06e-07 | 109 |